RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 FAM135AQ9P2D6 1515 aa32.26■■■□□ 2.76
SSH1-207ENST00000547862 TCOF1Q13428 1488 aaKnown RBP32.25■■■□□ 2.75
SSH1-207ENST00000547862 RSPH4AQ5TD94 716 aa32.25■■■□□ 2.75
SSH1-207ENST00000547862 MAST1Q9Y2H9 1570 aa32.24■■■□□ 2.75
SSH1-207ENST00000547862 PZPP20742 1482 aa32.24■■■□□ 2.75
SSH1-207ENST00000547862 TSPY4P0CV99 314 aa32.24■■■□□ 2.75
SSH1-207ENST00000547862 TSPY10P0CW01 314 aa32.24■■■□□ 2.75
SSH1-207ENST00000547862 KANK4Q5T7N3 995 aaPredicted RBP32.24■■■□□ 2.75
SSH1-207ENST00000547862 TNRQ92752 1358 aa32.23■■■□□ 2.75
SSH1-207ENST00000547862 ZNF335Q9H4Z2 1342 aaPredicted RBP32.23■■■□□ 2.75
SSH1-207ENST00000547862 FBXO31Q5XUX0 539 aaPredicted RBP32.22■■■□□ 2.75
SSH1-207ENST00000547862 RNF17Q9BXT8 1623 aaKnown RBP32.22■■■□□ 2.75
SSH1-207ENST00000547862 MAP3K1Q13233 1512 aa32.21■■■□□ 2.75
SSH1-207ENST00000547862 WASHC2CQ9Y4E1 1318 aa32.21■■■□□ 2.75
SSH1-207ENST00000547862 MYOM3Q5VTT5 1437 aa32.2■■■□□ 2.75
SSH1-207ENST00000547862 IQSEC2Q5JU85 1478 aa32.19■■■□□ 2.74
SSH1-207ENST00000547862 PKD2Q13563 968 aa32.19■■■□□ 2.74
SSH1-207ENST00000547862 ZC3H13Q5T200 1668 aaKnown RBP32.18■■■□□ 2.74
SSH1-207ENST00000547862 CEP152O94986 1710 aa32.17■■■□□ 2.74
SSH1-207ENST00000547862 EIF2AK4Q9P2K8 1649 aaKnown RBP32.17■■■□□ 2.74
SSH1-207ENST00000547862 CROCC2H7BZ55 1655 aa32.15■■■□□ 2.74
SSH1-207ENST00000547862 NEURL4Q96JN8 1562 aa32.14■■■□□ 2.74
SSH1-207ENST00000547862 MIA2Q96PC5 1412 aa32.13■■■□□ 2.73
SSH1-207ENST00000547862 ABCC3O15438 1527 aa32.12■■■□□ 2.73
SSH1-207ENST00000547862 MROH1Q8NDA8 1641 aa32.11■■■□□ 2.73
SSH1-207ENST00000547862 PTPN23Q9H3S7 1636 aa32.09■■■□□ 2.73
SSH1-207ENST00000547862 CFAP65Q6ZU64 1925 aaKnown RBP32.09■■■□□ 2.73
SSH1-207ENST00000547862 UGGT1Q9NYU2 1555 aa32.07■■■□□ 2.72
SSH1-207ENST00000547862 NLRP1Q9C000 1473 aa32.06■■■□□ 2.72
SSH1-207ENST00000547862 DISP3Q9P2K9 1392 aa32.06■■■□□ 2.72
SSH1-207ENST00000547862 SPATA31D1Q6ZQQ2 1576 aa32.05■■■□□ 2.72
SSH1-207ENST00000547862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.05■■■□□ 2.72
SSH1-207ENST00000547862 DUOX2Q9NRD8 1548 aa32.05■■■□□ 2.72
SSH1-207ENST00000547862 APLP2Q06481 763 aa32.03■■■□□ 2.72
SSH1-207ENST00000547862 UBAP1LF5GYI3 381 aa32.01■■■□□ 2.71
SSH1-207ENST00000547862 ERVK-7P63135 1459 aa32■■■□□ 2.71
SSH1-207ENST00000547862 SHANK2Q9UPX8 1470 aa31.97■■■□□ 2.71
SSH1-207ENST00000547862 KIF15Q9NS87 1388 aa31.97■■■□□ 2.71
SSH1-207ENST00000547862 IQGAP1P46940 1657 aa31.97■■■□□ 2.71
SSH1-207ENST00000547862 DEPDC5O75140 1603 aa31.96■■■□□ 2.71
SSH1-207ENST00000547862 ABCC5O15440 1437 aa31.95■■■□□ 2.71
SSH1-207ENST00000547862 PRDM15P57071 1507 aaPredicted RBP31.95■■■□□ 2.7
SSH1-207ENST00000547862 ANKLE2Q86XL3 938 aa31.94■■■□□ 2.7
SSH1-207ENST00000547862 THEMISQ8N1K5 641 aaPredicted RBP31.94■■■□□ 2.7
SSH1-207ENST00000547862 DAPK1P53355 1430 aa31.92■■■□□ 2.7
SSH1-207ENST00000547862 FGD6Q6ZV73 1430 aa31.92■■■□□ 2.7
SSH1-207ENST00000547862 UBR1Q8IWV7 1749 aa31.92■■■□□ 2.7
SSH1-207ENST00000547862 CPS1P31327 1500 aa31.92■■■□□ 2.7
SSH1-207ENST00000547862 NPHP4O75161 1426 aaPredicted RBP31.92■■■□□ 2.7
SSH1-207ENST00000547862 VWDEQ8N2E2 1590 aa31.91■■■□□ 2.7
SSH1-207ENST00000547862 RRP7BPQ9NSQ0 103 aa31.91■■■□□ 2.7
SSH1-207ENST00000547862 ERBINQ96RT1 1412 aa31.9■■■□□ 2.7
SSH1-207ENST00000547862 SCAF1Q9H7N4 1312 aaKnown RBP31.88■■■□□ 2.69
SSH1-207ENST00000547862 MED14O60244 1454 aa31.85■■■□□ 2.69
SSH1-207ENST00000547862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.85■■■□□ 2.69
SSH1-207ENST00000547862 STRCP1A6NGW2 1772 aa31.84■■■□□ 2.69
SSH1-207ENST00000547862 ILDR2Q71H61 639 aa31.83■■■□□ 2.69
SSH1-207ENST00000547862 CHIC2Q9UKJ5 165 aa31.82■■■□□ 2.68
SSH1-207ENST00000547862 PIP4K2BP78356 416 aa31.8■■■□□ 2.68
SSH1-207ENST00000547862 PIK3C2BO00750 1634 aa31.79■■■□□ 2.68
SSH1-207ENST00000547862 KANK1Q14678 1352 aa31.76■■■□□ 2.67
SSH1-207ENST00000547862 ANKRD30AQ9BXX3 1397 aa31.76■■■□□ 2.67
SSH1-207ENST00000547862 SCAF11Q99590 1463 aaKnown RBP31.75■■■□□ 2.67
SSH1-207ENST00000547862 ARHGAP31Q2M1Z3 1444 aa31.75■■■□□ 2.67
SSH1-207ENST00000547862 SYNMO15061 1565 aa31.74■■■□□ 2.67
SSH1-207ENST00000547862 TOM1O60784 492 aa31.7■■■□□ 2.67
SSH1-207ENST00000547862 FAM50AQ14320 339 aaKnown RBP31.69■■■□□ 2.66
SSH1-207ENST00000547862 SLIT1O75093 1534 aa31.69■■■□□ 2.66
SSH1-207ENST00000547862 ARHGAP23Q9P227 1491 aa31.67■■■□□ 2.66
SSH1-207ENST00000547862 EFCAB6Q5THR3 1501 aa31.66■■■□□ 2.66
SSH1-207ENST00000547862 LMTK2Q8IWU2 1503 aa31.66■■■□□ 2.66
SSH1-207ENST00000547862 HSPA1LP34931 641 aa31.66■■■□□ 2.66
SSH1-207ENST00000547862 ALKQ9UM73 1620 aa31.66■■■□□ 2.66
SSH1-207ENST00000547862 ADGRL2O95490 1459 aa31.65■■■□□ 2.66
SSH1-207ENST00000547862 LRRC7Q96NW7 1537 aa31.65■■■□□ 2.66
SSH1-207ENST00000547862 STAG3Q9UJ98 1225 aa31.63■■■□□ 2.65
SSH1-207ENST00000547862 LTKP29376 864 aa31.62■■■□□ 2.65
SSH1-207ENST00000547862 TXNDC2Q86VQ3 553 aa31.62■■■□□ 2.65
SSH1-207ENST00000547862 SENP3Q9H4L4 574 aaPredicted RBP31.61■■■□□ 2.65
SSH1-207ENST00000547862 KDM5AP29375 1690 aaKnown RBP31.6■■■□□ 2.65
SSH1-207ENST00000547862 MED1Q15648 1581 aaPredicted RBP31.6■■■□□ 2.65
SSH1-207ENST00000547862 XIRP1Q702N8 1843 aaKnown RBP31.59■■■□□ 2.65
SSH1-207ENST00000547862 EID1Q9Y6B2 187 aa31.58■■■□□ 2.65
SSH1-207ENST00000547862 SOCS7O14512 581 aa31.57■■■□□ 2.64
SSH1-207ENST00000547862 ADGRB3O60242 1522 aa31.57■■■□□ 2.64
SSH1-207ENST00000547862 TMEM2Q9UHN6 1383 aa31.56■■■□□ 2.64
SSH1-207ENST00000547862 MYO5BQ9ULV0 1848 aa31.54■■■□□ 2.64
SSH1-207ENST00000547862 ANKRD50Q9ULJ7 1429 aa31.53■■■□□ 2.64
SSH1-207ENST00000547862 TET3O43151 1660 aa31.52■■■□□ 2.64
SSH1-207ENST00000547862 GCC2Q8IWJ2 1684 aa31.51■■■□□ 2.64
SSH1-207ENST00000547862 IDI1Q13907 227 aa31.51■■■□□ 2.63
SSH1-207ENST00000547862 NOS1P29475 1434 aa31.5■■■□□ 2.63
SSH1-207ENST00000547862 UNC13BO14795 1591 aa31.48■■■□□ 2.63
SSH1-207ENST00000547862 RPRD2Q5VT52 1461 aaKnown RBP31.43■■■□□ 2.62
SSH1-207ENST00000547862 E9PCH4 1651 aa31.4■■■□□ 2.62
SSH1-207ENST00000547862 SLC26A8Q96RN1 970 aa31.39■■■□□ 2.62
SSH1-207ENST00000547862 BCANQ96GW7 911 aa31.38■■■□□ 2.61
SSH1-207ENST00000547862 TMEM131LA2VDJ0 1609 aa31.35■■■□□ 2.61
SSH1-207ENST00000547862 IQGAP3Q86VI3 1631 aa31.35■■■□□ 2.61
SSH1-207ENST00000547862 PPARGC1BQ86YN6 1023 aaKnown RBP31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms