RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
RAB5C-204ENST00000547517 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
RAB5C-204ENST00000547517 ANKRD30AQ9BXX3 1397 aa18.19■□□□□ 0.5
RAB5C-204ENST00000547517 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
RAB5C-204ENST00000547517 ZMYM3Q14202 1370 aa18.18■□□□□ 0.5
RAB5C-204ENST00000547517 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
RAB5C-204ENST00000547517 ADGRL2O95490 1459 aa18.18■□□□□ 0.5
RAB5C-204ENST00000547517 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
RAB5C-204ENST00000547517 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
RAB5C-204ENST00000547517 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
RAB5C-204ENST00000547517 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
RAB5C-204ENST00000547517 NPATQ14207 1427 aa18.15■□□□□ 0.5
RAB5C-204ENST00000547517 HSPA2P54652 639 aa18.14■□□□□ 0.49
RAB5C-204ENST00000547517 ZC3H13Q5T200 1668 aaKnown RBP18.14■□□□□ 0.49
RAB5C-204ENST00000547517 PTPRKQ15262 1439 aa18.14■□□□□ 0.49
RAB5C-204ENST00000547517 FBXO41Q8TF61 875 aa18.13■□□□□ 0.49
RAB5C-204ENST00000547517 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
RAB5C-204ENST00000547517 ABCC3O15438 1527 aa18.13■□□□□ 0.49
RAB5C-204ENST00000547517 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
RAB5C-204ENST00000547517 CEP152O94986 1710 aa18.12■□□□□ 0.49
RAB5C-204ENST00000547517 ITGAEP38570 1179 aa18.11■□□□□ 0.49
RAB5C-204ENST00000547517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
RAB5C-204ENST00000547517 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
RAB5C-204ENST00000547517 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
RAB5C-204ENST00000547517 MYO3AQ8NEV4 1616 aa18.11■□□□□ 0.49
RAB5C-204ENST00000547517 PZPP20742 1482 aa18.1■□□□□ 0.49
RAB5C-204ENST00000547517 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
RAB5C-204ENST00000547517 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
RAB5C-204ENST00000547517 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
RAB5C-204ENST00000547517 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
RAB5C-204ENST00000547517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.488e-8■■□□□ 12.7
RAB5C-204ENST00000547517 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-204ENST00000547517 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-204ENST00000547517 FBXO31Q5XUX0 539 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-204ENST00000547517 KANK1Q14678 1352 aa18.04■□□□□ 0.48
RAB5C-204ENST00000547517 TNRQ92752 1358 aa18.04■□□□□ 0.48
RAB5C-204ENST00000547517 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
RAB5C-204ENST00000547517 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
RAB5C-204ENST00000547517 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
RAB5C-204ENST00000547517 UNC13BO14795 1591 aa18■□□□□ 0.47
RAB5C-204ENST00000547517 LMTK2Q8IWU2 1503 aa17.99■□□□□ 0.47
RAB5C-204ENST00000547517 A2ML1A8K2U0 1454 aa17.99■□□□□ 0.47
RAB5C-204ENST00000547517 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
RAB5C-204ENST00000547517 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
RAB5C-204ENST00000547517 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
RAB5C-204ENST00000547517 NLRP1Q9C000 1473 aa17.96■□□□□ 0.47
RAB5C-204ENST00000547517 GCC2Q8IWJ2 1684 aa17.94■□□□□ 0.46
RAB5C-204ENST00000547517 CFAP65Q6ZU64 1925 aaKnown RBP17.93■□□□□ 0.46
RAB5C-204ENST00000547517 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
RAB5C-204ENST00000547517 TET3O43151 1660 aa17.93■□□□□ 0.46
RAB5C-204ENST00000547517 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
RAB5C-204ENST00000547517 IQGAP3Q86VI3 1631 aa17.91■□□□□ 0.46
RAB5C-204ENST00000547517 SOCS7O14512 581 aa17.91■□□□□ 0.46
RAB5C-204ENST00000547517 NAIPQ13075 1403 aa17.9■□□□□ 0.46
RAB5C-204ENST00000547517 SYNMO15061 1565 aa17.88■□□□□ 0.45
RAB5C-204ENST00000547517 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
RAB5C-204ENST00000547517 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
RAB5C-204ENST00000547517 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
RAB5C-204ENST00000547517 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
RAB5C-204ENST00000547517 NUP155O75694 1391 aa17.87■□□□□ 0.45
RAB5C-204ENST00000547517 PTPRTO14522 1441 aa17.87■□□□□ 0.45
RAB5C-204ENST00000547517 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
RAB5C-204ENST00000547517 NOS1P29475 1434 aa17.86■□□□□ 0.45
RAB5C-204ENST00000547517 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
RAB5C-204ENST00000547517 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
RAB5C-204ENST00000547517 E9PCH4 1651 aa17.85■□□□□ 0.45
RAB5C-204ENST00000547517 PKD2Q13563 968 aa17.84■□□□□ 0.45
RAB5C-204ENST00000547517 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.45
RAB5C-204ENST00000547517 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
RAB5C-204ENST00000547517 ADGRB3O60242 1522 aa17.8■□□□□ 0.44
RAB5C-204ENST00000547517 IDI1Q13907 227 aa17.78■□□□□ 0.44
RAB5C-204ENST00000547517 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
RAB5C-204ENST00000547517 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
RAB5C-204ENST00000547517 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.44
RAB5C-204ENST00000547517 SLIT1O75093 1534 aa17.77■□□□□ 0.43
RAB5C-204ENST00000547517 NPHP4O75161 1426 aaPredicted RBP17.76■□□□□ 0.43
RAB5C-204ENST00000547517 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
RAB5C-204ENST00000547517 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
RAB5C-204ENST00000547517 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
RAB5C-204ENST00000547517 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
RAB5C-204ENST00000547517 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
RAB5C-204ENST00000547517 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
RAB5C-204ENST00000547517 MED14O60244 1454 aa17.74■□□□□ 0.43
RAB5C-204ENST00000547517 TMEM2Q9UHN6 1383 aa17.73■□□□□ 0.43
RAB5C-204ENST00000547517 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
RAB5C-204ENST00000547517 LTBP4Q8N2S1 1624 aa17.72■□□□□ 0.43
RAB5C-204ENST00000547517 MYO5BQ9ULV0 1848 aa17.71■□□□□ 0.43
RAB5C-204ENST00000547517 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
RAB5C-204ENST00000547517 CERKQ8TCT0 537 aa17.71■□□□□ 0.43
RAB5C-204ENST00000547517 TMEM131LA2VDJ0 1609 aa17.71■□□□□ 0.43
RAB5C-204ENST00000547517 DISP3Q9P2K9 1392 aa17.7■□□□□ 0.42
RAB5C-204ENST00000547517 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
RAB5C-204ENST00000547517 TRPM2O94759 1503 aa17.69■□□□□ 0.42
RAB5C-204ENST00000547517 CHGAP10645 457 aaKnown RBP17.69■□□□□ 0.42
RAB5C-204ENST00000547517 LTKP29376 864 aa17.69■□□□□ 0.42
RAB5C-204ENST00000547517 EID1Q9Y6B2 187 aa17.69■□□□□ 0.42
RAB5C-204ENST00000547517 SETD5Q9C0A6 1442 aa17.69■□□□□ 0.42
RAB5C-204ENST00000547517 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
RAB5C-204ENST00000547517 CLTCL1P53675 1640 aa17.67■□□□□ 0.42
RAB5C-204ENST00000547517 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms