RNA–Protein interactions for RNA: ENST00000546814.1

LETMD1-204, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-204ENST00000546814 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
LETMD1-204ENST00000546814 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
LETMD1-204ENST00000546814 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
LETMD1-204ENST00000546814 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
LETMD1-204ENST00000546814 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
LETMD1-204ENST00000546814 NCKAP5LQ9HCH0 1330 aa11.08□□□□□ -0.64
LETMD1-204ENST00000546814 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
LETMD1-204ENST00000546814 CPS1P31327 1500 aa11.05□□□□□ -0.64
LETMD1-204ENST00000546814 UBAP1LF5GYI3 381 aa11.05□□□□□ -0.64
LETMD1-204ENST00000546814 HNRNPMP52272 730 aaKnown RBP eCLIP11.05□□□□□ -0.64
LETMD1-204ENST00000546814 CFDP1Q9UEE9 299 aaPredicted RBP11.05□□□□□ -0.64
LETMD1-204ENST00000546814 DNMT1P26358 1616 aaKnown RBP11.05□□□□□ -0.64
LETMD1-204ENST00000546814 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
LETMD1-204ENST00000546814 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
LETMD1-204ENST00000546814 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
LETMD1-204ENST00000546814 MED14O60244 1454 aa11.04□□□□□ -0.64
LETMD1-204ENST00000546814 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
LETMD1-204ENST00000546814 PZPP20742 1482 aa11.03□□□□□ -0.64
LETMD1-204ENST00000546814 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
LETMD1-204ENST00000546814 RSPH4AQ5TD94 716 aa11.02□□□□□ -0.65
LETMD1-204ENST00000546814 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
LETMD1-204ENST00000546814 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
LETMD1-204ENST00000546814 SHANK2Q9UPX8 1470 aa11.01□□□□□ -0.65
LETMD1-204ENST00000546814 NLRP1Q9C000 1473 aa11□□□□□ -0.65
LETMD1-204ENST00000546814 TOM1O60784 492 aa11□□□□□ -0.65
LETMD1-204ENST00000546814 GGT6Q6P531 493 aa11□□□□□ -0.65
LETMD1-204ENST00000546814 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
LETMD1-204ENST00000546814 DEPDC5O75140 1603 aa10.99□□□□□ -0.65
LETMD1-204ENST00000546814 TNRQ92752 1358 aa10.99□□□□□ -0.65
LETMD1-204ENST00000546814 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
LETMD1-204ENST00000546814 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
LETMD1-204ENST00000546814 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
LETMD1-204ENST00000546814 SPINK5Q9NQ38 1064 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-204ENST00000546814 MTUS2Q5JR59 1369 aa10.98□□□□□ -0.65
LETMD1-204ENST00000546814 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
LETMD1-204ENST00000546814 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
LETMD1-204ENST00000546814 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-204ENST00000546814 HSPA1LP34931 641 aa10.97□□□□□ -0.65
LETMD1-204ENST00000546814 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
LETMD1-204ENST00000546814 THEMISQ8N1K5 641 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-204ENST00000546814 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
LETMD1-204ENST00000546814 MED1Q15648 1581 aaPredicted RBP10.97□□□□□ -0.65
LETMD1-204ENST00000546814 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.65
LETMD1-204ENST00000546814 ZNF644Q9H582 1327 aaPredicted RBP10.96□□□□□ -0.65
LETMD1-204ENST00000546814 FOXD4L1Q9NU39 408 aa10.95□□□□□ -0.66
LETMD1-204ENST00000546814 MYCNP04198 464 aaPredicted RBP10.94□□□□□ -0.66
LETMD1-204ENST00000546814 FBXO31Q5XUX0 539 aaPredicted RBP10.94□□□□□ -0.66
LETMD1-204ENST00000546814 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
LETMD1-204ENST00000546814 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
LETMD1-204ENST00000546814 NPHP4O75161 1426 aaPredicted RBP10.93□□□□□ -0.66
LETMD1-204ENST00000546814 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
LETMD1-204ENST00000546814 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
LETMD1-204ENST00000546814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
LETMD1-204ENST00000546814 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
LETMD1-204ENST00000546814 KIF3BO15066 747 aa10.92□□□□□ -0.66
LETMD1-204ENST00000546814 LRRC7Q96NW7 1537 aa10.91□□□□□ -0.66
LETMD1-204ENST00000546814 SAMD1Q6SPF0 538 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-204ENST00000546814 SYNMO15061 1565 aa10.9□□□□□ -0.66
LETMD1-204ENST00000546814 CAMSAP2Q08AD1 1489 aa10.9□□□□□ -0.66
LETMD1-204ENST00000546814 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.67
LETMD1-204ENST00000546814 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
LETMD1-204ENST00000546814 NCOA2Q15596 1464 aa10.89□□□□□ -0.67
LETMD1-204ENST00000546814 ARHGAP23Q9P227 1491 aa10.89□□□□□ -0.67
LETMD1-204ENST00000546814 ZBTB22O15209 634 aa10.89□□□□□ -0.67
LETMD1-204ENST00000546814 APLP2Q06481 763 aa10.89□□□□□ -0.67
LETMD1-204ENST00000546814 ABCC3O15438 1527 aa10.89□□□□□ -0.67
LETMD1-204ENST00000546814 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
LETMD1-204ENST00000546814 CAPN15O75808 1086 aa10.88□□□□□ -0.67
LETMD1-204ENST00000546814 ARHGAP31Q2M1Z3 1444 aa10.88□□□□□ -0.67
LETMD1-204ENST00000546814 SLIT1O75093 1534 aa10.88□□□□□ -0.67
LETMD1-204ENST00000546814 EIF2AK4Q9P2K8 1649 aaKnown RBP10.87□□□□□ -0.67
LETMD1-204ENST00000546814 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
LETMD1-204ENST00000546814 PIP4K2BP78356 416 aa10.87□□□□□ -0.67
LETMD1-204ENST00000546814 TSPY4P0CV99 314 aa10.86□□□□□ -0.67
LETMD1-204ENST00000546814 TSPY10P0CW01 314 aa10.86□□□□□ -0.67
LETMD1-204ENST00000546814 DSG3P32926 999 aa10.86□□□□□ -0.67
LETMD1-204ENST00000546814 STRCP1A6NGW2 1772 aa10.85□□□□□ -0.67
LETMD1-204ENST00000546814 MROH1Q8NDA8 1641 aa10.85□□□□□ -0.67
LETMD1-204ENST00000546814 FAM135BQ49AJ0 1406 aa10.84□□□□□ -0.67
LETMD1-204ENST00000546814 SCAF11Q99590 1463 aaKnown RBP10.84□□□□□ -0.67
LETMD1-204ENST00000546814 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
LETMD1-204ENST00000546814 RGS17Q9UGC6 210 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-204ENST00000546814 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
LETMD1-204ENST00000546814 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
LETMD1-204ENST00000546814 LRRC9Q6ZRR7 1453 aa10.81□□□□□ -0.68
LETMD1-204ENST00000546814 PRDM15P57071 1507 aaPredicted RBP10.81□□□□□ -0.68
LETMD1-204ENST00000546814 DUOX2Q9NRD8 1548 aa10.81□□□□□ -0.68
LETMD1-204ENST00000546814 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
LETMD1-204ENST00000546814 LTKP29376 864 aa10.8□□□□□ -0.68
LETMD1-204ENST00000546814 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
LETMD1-204ENST00000546814 ERBINQ96RT1 1412 aa10.79□□□□□ -0.68
LETMD1-204ENST00000546814 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
LETMD1-204ENST00000546814 LMTK2Q8IWU2 1503 aa10.78□□□□□ -0.68
LETMD1-204ENST00000546814 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.68
LETMD1-204ENST00000546814 TET3O43151 1660 aa10.77□□□□□ -0.69
LETMD1-204ENST00000546814 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.69
LETMD1-204ENST00000546814 EID1Q9Y6B2 187 aa10.76□□□□□ -0.69
LETMD1-204ENST00000546814 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
LETMD1-204ENST00000546814 KCNA6P17658 529 aa10.75□□□□□ -0.69
LETMD1-204ENST00000546814 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms