RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 TNRQ92752 1358 aa21.14■□□□□ 0.98
RAB5B-203ENST00000546810 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
RAB5B-203ENST00000546810 ALKQ9UM73 1620 aa21.14■□□□□ 0.97
RAB5B-203ENST00000546810 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
RAB5B-203ENST00000546810 VWDEQ8N2E2 1590 aa21.13■□□□□ 0.97
RAB5B-203ENST00000546810 FBXO31Q5XUX0 539 aaPredicted RBP21.12■□□□□ 0.97
RAB5B-203ENST00000546810 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
RAB5B-203ENST00000546810 ADGBQ8N7X0 1667 aa21.11■□□□□ 0.97
RAB5B-203ENST00000546810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.1■□□□□ 0.97
RAB5B-203ENST00000546810 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
RAB5B-203ENST00000546810 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
RAB5B-203ENST00000546810 NPHP4O75161 1426 aaPredicted RBP21.08■□□□□ 0.97
RAB5B-203ENST00000546810 THEMISQ8N1K5 641 aaPredicted RBP21.08■□□□□ 0.97
RAB5B-203ENST00000546810 PZPP20742 1482 aa21.07■□□□□ 0.96
RAB5B-203ENST00000546810 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
RAB5B-203ENST00000546810 MED14O60244 1454 aa21.06■□□□□ 0.96
RAB5B-203ENST00000546810 RGS17Q9UGC6 210 aaPredicted RBP21.04■□□□□ 0.96
RAB5B-203ENST00000546810 KIF3BO15066 747 aa21.03■□□□□ 0.96
RAB5B-203ENST00000546810 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
RAB5B-203ENST00000546810 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
RAB5B-203ENST00000546810 ZNF644Q9H582 1327 aaPredicted RBP21.03■□□□□ 0.96
RAB5B-203ENST00000546810 UGGT1Q9NYU2 1555 aa21.02■□□□□ 0.96
RAB5B-203ENST00000546810 NLRP1Q9C000 1473 aa21.02■□□□□ 0.96
RAB5B-203ENST00000546810 DEPDC5O75140 1603 aa21.02■□□□□ 0.96
RAB5B-203ENST00000546810 LRRC7Q96NW7 1537 aa21.02■□□□□ 0.96
RAB5B-203ENST00000546810 KDM5DQ9BY66 1539 aa21.02■□□□□ 0.96
RAB5B-203ENST00000546810 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
RAB5B-203ENST00000546810 WASHC2CQ9Y4E1 1318 aa21.01■□□□□ 0.95
RAB5B-203ENST00000546810 MBD5Q9P267 1494 aa21.01■□□□□ 0.95
RAB5B-203ENST00000546810 RNF17Q9BXT8 1623 aaKnown RBP20.99■□□□□ 0.95
RAB5B-203ENST00000546810 IQGAP1P46940 1657 aa20.98■□□□□ 0.95
RAB5B-203ENST00000546810 APLP2Q06481 763 aa20.97■□□□□ 0.95
RAB5B-203ENST00000546810 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
RAB5B-203ENST00000546810 SYNMO15061 1565 aa20.96■□□□□ 0.95
RAB5B-203ENST00000546810 STRCP1A6NGW2 1772 aa20.95■□□□□ 0.94
RAB5B-203ENST00000546810 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
RAB5B-203ENST00000546810 POTEAQ6S8J7 498 aa20.89■□□□□ 0.93
RAB5B-203ENST00000546810 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
RAB5B-203ENST00000546810 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
RAB5B-203ENST00000546810 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
RAB5B-203ENST00000546810 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
RAB5B-203ENST00000546810 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.93
RAB5B-203ENST00000546810 SCAF11Q99590 1463 aaKnown RBP20.82■□□□□ 0.92
RAB5B-203ENST00000546810 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
RAB5B-203ENST00000546810 ERVK-7P63135 1459 aa20.81■□□□□ 0.92
RAB5B-203ENST00000546810 ABCC3O15438 1527 aa20.8■□□□□ 0.92
RAB5B-203ENST00000546810 CAMSAP2Q08AD1 1489 aa20.8■□□□□ 0.92
RAB5B-203ENST00000546810 LRRC9Q6ZRR7 1453 aa20.8■□□□□ 0.92
RAB5B-203ENST00000546810 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
RAB5B-203ENST00000546810 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
RAB5B-203ENST00000546810 LTKP29376 864 aa20.78■□□□□ 0.92
RAB5B-203ENST00000546810 TXNDC2Q86VQ3 553 aa20.78■□□□□ 0.92
RAB5B-203ENST00000546810 NCOA2Q15596 1464 aa20.76■□□□□ 0.91
RAB5B-203ENST00000546810 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
RAB5B-203ENST00000546810 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
RAB5B-203ENST00000546810 UBR1Q8IWV7 1749 aa20.75■□□□□ 0.91
RAB5B-203ENST00000546810 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
RAB5B-203ENST00000546810 SLIT1O75093 1534 aa20.73■□□□□ 0.91
RAB5B-203ENST00000546810 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
RAB5B-203ENST00000546810 ARHGEF5Q12774 1597 aa20.72■□□□□ 0.91
RAB5B-203ENST00000546810 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
RAB5B-203ENST00000546810 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.9
RAB5B-203ENST00000546810 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
RAB5B-203ENST00000546810 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
RAB5B-203ENST00000546810 KCNA6P17658 529 aa20.66■□□□□ 0.9
RAB5B-203ENST00000546810 EIF2AK4Q9P2K8 1649 aaKnown RBP20.66■□□□□ 0.9
RAB5B-203ENST00000546810 PROSER2Q86WR7 435 aaPredicted RBP20.65■□□□□ 0.9
RAB5B-203ENST00000546810 TMEM2Q9UHN6 1383 aa20.64■□□□□ 0.89
RAB5B-203ENST00000546810 RBM33Q96EV2 1170 aaKnown RBP20.64■□□□□ 0.89
RAB5B-203ENST00000546810 CEP152O94986 1710 aa20.64■□□□□ 0.89
RAB5B-203ENST00000546810 JCADQ9P266 1359 aa20.63■□□□□ 0.89
RAB5B-203ENST00000546810 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
RAB5B-203ENST00000546810 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
RAB5B-203ENST00000546810 CFAP65Q6ZU64 1925 aaKnown RBP20.62■□□□□ 0.89
RAB5B-203ENST00000546810 ARHGAP31Q2M1Z3 1444 aa20.61■□□□□ 0.89
RAB5B-203ENST00000546810 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
RAB5B-203ENST00000546810 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
RAB5B-203ENST00000546810 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
RAB5B-203ENST00000546810 MSH6P52701 1360 aa20.59■□□□□ 0.89
RAB5B-203ENST00000546810 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
RAB5B-203ENST00000546810 PIK3C2BO00750 1634 aa20.58■□□□□ 0.89
RAB5B-203ENST00000546810 SLAIN2Q9P270 581 aa20.58■□□□□ 0.89
RAB5B-203ENST00000546810 PHLPP1O60346 1717 aa20.57■□□□□ 0.88
RAB5B-203ENST00000546810 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
RAB5B-203ENST00000546810 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
RAB5B-203ENST00000546810 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
RAB5B-203ENST00000546810 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
RAB5B-203ENST00000546810 TET3O43151 1660 aa20.54■□□□□ 0.88
RAB5B-203ENST00000546810 ZNF772Q68DY9 489 aaPredicted RBP20.54■□□□□ 0.88
RAB5B-203ENST00000546810 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
RAB5B-203ENST00000546810 MEX3CQ5U5Q3 659 aaKnown RBP20.53■□□□□ 0.88
RAB5B-203ENST00000546810 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
RAB5B-203ENST00000546810 NWD1Q149M9 1564 aa20.52■□□□□ 0.88
RAB5B-203ENST00000546810 IDI1Q13907 227 aa20.52■□□□□ 0.88
RAB5B-203ENST00000546810 LRP6O75581 1613 aa20.52■□□□□ 0.88
RAB5B-203ENST00000546810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.87
RAB5B-203ENST00000546810 COL16A1Q07092 1604 aaPredicted RBP20.49■□□□□ 0.87
RAB5B-203ENST00000546810 KDM5AP29375 1690 aaKnown RBP20.49■□□□□ 0.87
RAB5B-203ENST00000546810 BCANQ96GW7 911 aa20.49■□□□□ 0.87
RAB5B-203ENST00000546810 FGD6Q6ZV73 1430 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms