RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
BRF1-207ENST00000546417 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
BRF1-207ENST00000546417 VWDEQ8N2E2 1590 aa19.69■□□□□ 0.74
BRF1-207ENST00000546417 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
BRF1-207ENST00000546417 ALKQ9UM73 1620 aa19.67■□□□□ 0.74
BRF1-207ENST00000546417 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
BRF1-207ENST00000546417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.67■□□□□ 0.745e-7■■■■■ 29.7
BRF1-207ENST00000546417 DEPDC5O75140 1603 aa19.65■□□□□ 0.74
BRF1-207ENST00000546417 DHX29Q7Z478 1369 aaKnown RBP19.65■□□□□ 0.74
BRF1-207ENST00000546417 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
BRF1-207ENST00000546417 MED14O60244 1454 aa19.65■□□□□ 0.74
BRF1-207ENST00000546417 PZPP20742 1482 aa19.65■□□□□ 0.74
BRF1-207ENST00000546417 FAM135AQ9P2D6 1515 aa19.64■□□□□ 0.73
BRF1-207ENST00000546417 RTEL1-TNFRSF6BF6WH68 1400 aa19.63■□□□□ 0.73
BRF1-207ENST00000546417 UGGT1Q9NYU2 1555 aa19.62■□□□□ 0.73
BRF1-207ENST00000546417 KDM5DQ9BY66 1539 aa19.62■□□□□ 0.73
BRF1-207ENST00000546417 NLRP1Q9C000 1473 aa19.62■□□□□ 0.73
BRF1-207ENST00000546417 KIF3BO15066 747 aa19.62■□□□□ 0.73
BRF1-207ENST00000546417 MIA2Q96PC5 1412 aa19.61■□□□□ 0.73
BRF1-207ENST00000546417 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
BRF1-207ENST00000546417 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
BRF1-207ENST00000546417 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
BRF1-207ENST00000546417 RNF17Q9BXT8 1623 aaKnown RBP19.59■□□□□ 0.73
BRF1-207ENST00000546417 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
BRF1-207ENST00000546417 MBD5Q9P267 1494 aa19.59■□□□□ 0.73
BRF1-207ENST00000546417 LRRC7Q96NW7 1537 aa19.58■□□□□ 0.73
BRF1-207ENST00000546417 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
BRF1-207ENST00000546417 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
BRF1-207ENST00000546417 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
BRF1-207ENST00000546417 SYNMO15061 1565 aa19.57■□□□□ 0.72
BRF1-207ENST00000546417 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
BRF1-207ENST00000546417 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
BRF1-207ENST00000546417 CCDC141Q6ZP82 1450 aa19.48■□□□□ 0.71
BRF1-207ENST00000546417 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
BRF1-207ENST00000546417 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
BRF1-207ENST00000546417 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
BRF1-207ENST00000546417 POTEAQ6S8J7 498 aa19.43■□□□□ 0.7
BRF1-207ENST00000546417 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
BRF1-207ENST00000546417 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
BRF1-207ENST00000546417 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
BRF1-207ENST00000546417 SCAF11Q99590 1463 aaKnown RBP19.41■□□□□ 0.7
BRF1-207ENST00000546417 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
BRF1-207ENST00000546417 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
BRF1-207ENST00000546417 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
BRF1-207ENST00000546417 UBR1Q8IWV7 1749 aa19.4■□□□□ 0.7
BRF1-207ENST00000546417 ERVK-7P63135 1459 aa19.4■□□□□ 0.7
BRF1-207ENST00000546417 ABCC3O15438 1527 aa19.4■□□□□ 0.7
BRF1-207ENST00000546417 TXNDC2Q86VQ3 553 aa19.38■□□□□ 0.69
BRF1-207ENST00000546417 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
BRF1-207ENST00000546417 ARHGEF5Q12774 1597 aa19.36■□□□□ 0.69
BRF1-207ENST00000546417 LTKP29376 864 aa19.36■□□□□ 0.69
BRF1-207ENST00000546417 EID1Q9Y6B2 187 aa19.35■□□□□ 0.69
BRF1-207ENST00000546417 SLIT1O75093 1534 aa19.35■□□□□ 0.69
BRF1-207ENST00000546417 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
BRF1-207ENST00000546417 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
BRF1-207ENST00000546417 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.69
BRF1-207ENST00000546417 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
BRF1-207ENST00000546417 CEP152O94986 1710 aa19.31■□□□□ 0.68
BRF1-207ENST00000546417 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
BRF1-207ENST00000546417 SETD1AO15047 1707 aaKnown RBP19.29■□□□□ 0.68
BRF1-207ENST00000546417 MAST1Q9Y2H9 1570 aa19.28■□□□□ 0.68
BRF1-207ENST00000546417 MROH1Q8NDA8 1641 aa19.28■□□□□ 0.68
BRF1-207ENST00000546417 LRRC9Q6ZRR7 1453 aa19.28■□□□□ 0.68
BRF1-207ENST00000546417 KCNA6P17658 529 aa19.26■□□□□ 0.67
BRF1-207ENST00000546417 PROSER2Q86WR7 435 aaPredicted RBP19.26■□□□□ 0.67
BRF1-207ENST00000546417 TMEM2Q9UHN6 1383 aa19.25■□□□□ 0.67
BRF1-207ENST00000546417 ARHGAP31Q2M1Z3 1444 aa19.25■□□□□ 0.67
BRF1-207ENST00000546417 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
BRF1-207ENST00000546417 MAP3K1Q13233 1512 aa19.23■□□□□ 0.67
BRF1-207ENST00000546417 PIK3C2BO00750 1634 aa19.22■□□□□ 0.67
BRF1-207ENST00000546417 JCADQ9P266 1359 aa19.22■□□□□ 0.67
BRF1-207ENST00000546417 PHLPP1O60346 1717 aa19.22■□□□□ 0.67
BRF1-207ENST00000546417 DUOX2Q9NRD8 1548 aa19.2■□□□□ 0.66
BRF1-207ENST00000546417 MSH6P52701 1360 aa19.2■□□□□ 0.66
BRF1-207ENST00000546417 UPF1Q92900 1129 aaKnown RBP eCLIP19.2■□□□□ 0.66
BRF1-207ENST00000546417 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
BRF1-207ENST00000546417 KDM5AP29375 1690 aaKnown RBP19.2■□□□□ 0.66
BRF1-207ENST00000546417 PRDM15P57071 1507 aaPredicted RBP19.2■□□□□ 0.66
BRF1-207ENST00000546417 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
BRF1-207ENST00000546417 SLC26A8Q96RN1 970 aa19.19■□□□□ 0.66
BRF1-207ENST00000546417 TET3O43151 1660 aa19.18■□□□□ 0.66
BRF1-207ENST00000546417 NKTRP30414 1462 aaKnown RBP19.18■□□□□ 0.66
BRF1-207ENST00000546417 EFCAB6Q5THR3 1501 aa19.18■□□□□ 0.66
BRF1-207ENST00000546417 ZNF772Q68DY9 489 aaPredicted RBP19.16■□□□□ 0.66
BRF1-207ENST00000546417 NWD1Q149M9 1564 aa19.15■□□□□ 0.66
BRF1-207ENST00000546417 IDI1Q13907 227 aa19.14■□□□□ 0.65
BRF1-207ENST00000546417 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
BRF1-207ENST00000546417 MEX3CQ5U5Q3 659 aaKnown RBP19.13■□□□□ 0.65
BRF1-207ENST00000546417 ERBINQ96RT1 1412 aa19.12■□□□□ 0.65
BRF1-207ENST00000546417 KANK1Q14678 1352 aa19.12■□□□□ 0.65
BRF1-207ENST00000546417 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
BRF1-207ENST00000546417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.655e-6■■■□□ 17
BRF1-207ENST00000546417 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
BRF1-207ENST00000546417 MYOM3Q5VTT5 1437 aa19.11■□□□□ 0.65
BRF1-207ENST00000546417 FGD6Q6ZV73 1430 aa19.11■□□□□ 0.65
BRF1-207ENST00000546417 KIF15Q9NS87 1388 aa19.11■□□□□ 0.65
BRF1-207ENST00000546417 BCANQ96GW7 911 aa19.11■□□□□ 0.65
BRF1-207ENST00000546417 LRP6O75581 1613 aa19.09■□□□□ 0.65
BRF1-207ENST00000546417 RXRBP28702 533 aa19.07■□□□□ 0.64
BRF1-207ENST00000546417 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms