RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 DUOX2Q9NRD8 1548 aa36■■■■□ 3.35
CHFR-222ENST00000544093 KDM5DQ9BY66 1539 aa35.99■■■■□ 3.35
CHFR-222ENST00000544093 RNF17Q9BXT8 1623 aaKnown RBP35.97■■■■□ 3.35
CHFR-222ENST00000544093 KIF15Q9NS87 1388 aa35.93■■■■□ 3.34
CHFR-222ENST00000544093 PTPRKQ15262 1439 aa35.92■■■■□ 3.34
CHFR-222ENST00000544093 WASHC2CQ9Y4E1 1318 aa35.92■■■■□ 3.34
CHFR-222ENST00000544093 ERBINQ96RT1 1412 aa35.9■■■■□ 3.34
CHFR-222ENST00000544093 ZC3H13Q5T200 1668 aaKnown RBP35.89■■■■□ 3.34
CHFR-222ENST00000544093 ANKRD30AQ9BXX3 1397 aa35.89■■■■□ 3.34
CHFR-222ENST00000544093 FAM50AQ14320 339 aaKnown RBP35.87■■■■□ 3.33
CHFR-222ENST00000544093 PZPP20742 1482 aa35.85■■■■□ 3.33
CHFR-222ENST00000544093 MYO3AQ8NEV4 1616 aa35.84■■■■□ 3.33
CHFR-222ENST00000544093 RRP7BPQ9NSQ0 103 aa35.84■■■■□ 3.33
CHFR-222ENST00000544093 ZNF142P52746 1687 aaPredicted RBP35.82■■■■□ 3.33
CHFR-222ENST00000544093 ADGRL2O95490 1459 aa35.81■■■■□ 3.32
CHFR-222ENST00000544093 DMRT2Q9Y5R5 561 aa35.8■■■■□ 3.32
CHFR-222ENST00000544093 NCOA1Q15788 1441 aa35.8■■■■□ 3.32
CHFR-222ENST00000544093 MROH1Q8NDA8 1641 aa35.79■■■■□ 3.32
CHFR-222ENST00000544093 ABCC3O15438 1527 aa35.79■■■■□ 3.32
CHFR-222ENST00000544093 CHIC2Q9UKJ5 165 aa35.78■■■■□ 3.32
CHFR-222ENST00000544093 STRCQ7RTU9 1775 aa35.77■■■■□ 3.32
CHFR-222ENST00000544093 CEP170BQ9Y4F5 1589 aaPredicted RBP35.76■■■■□ 3.32
CHFR-222ENST00000544093 PRDM15P57071 1507 aaPredicted RBP35.76■■■■□ 3.31
CHFR-222ENST00000544093 DEPDC5O75140 1603 aa35.73■■■■□ 3.31
CHFR-222ENST00000544093 TNRQ92752 1358 aa35.72■■■■□ 3.31
CHFR-222ENST00000544093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.71■■■■□ 3.31
CHFR-222ENST00000544093 CAMSAP1Q5T5Y3 1602 aa35.69■■■■□ 3.3
CHFR-222ENST00000544093 A2ML1A8K2U0 1454 aa35.69■■■■□ 3.3
CHFR-222ENST00000544093 CEP152O94986 1710 aa35.69■■■■□ 3.3
CHFR-222ENST00000544093 KANK1Q14678 1352 aa35.67■■■■□ 3.3
CHFR-222ENST00000544093 FBXO31Q5XUX0 539 aaPredicted RBP35.67■■■■□ 3.3
CHFR-222ENST00000544093 PLA2R1Q13018 1463 aa35.67■■■■□ 3.3
CHFR-222ENST00000544093 NLRP1Q9C000 1473 aa35.65■■■■□ 3.3
CHFR-222ENST00000544093 PTPRTO14522 1441 aa35.65■■■■□ 3.3
CHFR-222ENST00000544093 PPARGC1BQ86YN6 1023 aaKnown RBP35.64■■■■□ 3.3
CHFR-222ENST00000544093 SPATA31D1Q6ZQQ2 1576 aa35.62■■■■□ 3.29
CHFR-222ENST00000544093 ARHGAP31Q2M1Z3 1444 aa35.61■■■■□ 3.29
CHFR-222ENST00000544093 ANKRD50Q9ULJ7 1429 aa35.61■■■■□ 3.29
CHFR-222ENST00000544093 ROCK1Q13464 1354 aa35.61■■■■□ 3.29
CHFR-222ENST00000544093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.58■■■■□ 3.29
CHFR-222ENST00000544093 ERVK-7P63135 1459 aa35.58■■■■□ 3.29
CHFR-222ENST00000544093 PKD2Q13563 968 aa35.57■■■■□ 3.28
CHFR-222ENST00000544093 LMTK2Q8IWU2 1503 aa35.57■■■■□ 3.28
CHFR-222ENST00000544093 VWDEQ8N2E2 1590 aa35.56■■■■□ 3.28
CHFR-222ENST00000544093 RRBP1Q9P2E9 1410 aaKnown RBP35.52■■■■□ 3.28
CHFR-222ENST00000544093 CFAP65Q6ZU64 1925 aaKnown RBP35.5■■■■□ 3.27
CHFR-222ENST00000544093 UGGT1Q9NYU2 1555 aa35.5■■■■□ 3.27
CHFR-222ENST00000544093 THEMISQ8N1K5 641 aaPredicted RBP35.49■■■■□ 3.27
CHFR-222ENST00000544093 ILDR1Q86SU0 546 aaPredicted RBP35.48■■■■□ 3.27
CHFR-222ENST00000544093 NCKAP5LQ9HCH0 1330 aa35.46■■■■□ 3.27
CHFR-222ENST00000544093 POLR1AO95602 1720 aaPredicted RBP35.44■■■■□ 3.26
CHFR-222ENST00000544093 EFCAB6Q5THR3 1501 aa35.43■■■■□ 3.26
CHFR-222ENST00000544093 ITGAEP38570 1179 aa35.43■■■■□ 3.26
CHFR-222ENST00000544093 UNC13BO14795 1591 aa35.42■■■■□ 3.26
CHFR-222ENST00000544093 FBXO41Q8TF61 875 aa35.42■■■■□ 3.26
CHFR-222ENST00000544093 CERKQ8TCT0 537 aa35.4■■■■□ 3.26
CHFR-222ENST00000544093 RPRD2Q5VT52 1461 aaKnown RBP35.38■■■■□ 3.25
CHFR-222ENST00000544093 ANKLE2Q86XL3 938 aa35.37■■■■□ 3.25
CHFR-222ENST00000544093 TET3O43151 1660 aa35.37■■■■□ 3.25
CHFR-222ENST00000544093 UBR1Q8IWV7 1749 aa35.35■■■■□ 3.25
CHFR-222ENST00000544093 GCC2Q8IWJ2 1684 aa35.33■■■■□ 3.25
CHFR-222ENST00000544093 NEURL4Q96JN8 1562 aa35.31■■■■□ 3.24
CHFR-222ENST00000544093 KDM5AP29375 1690 aaKnown RBP35.3■■■■□ 3.24
CHFR-222ENST00000544093 NOS1P29475 1434 aa35.3■■■■□ 3.24
CHFR-222ENST00000544093 IQGAP3Q86VI3 1631 aa35.28■■■■□ 3.24
CHFR-222ENST00000544093 LTBP4Q8N2S1 1624 aa35.28■■■■□ 3.24
CHFR-222ENST00000544093 MED14O60244 1454 aa35.28■■■■□ 3.24
CHFR-222ENST00000544093 PIK3C2BO00750 1634 aa35.25■■■■□ 3.23
CHFR-222ENST00000544093 SYNMO15061 1565 aa35.25■■■■□ 3.23
CHFR-222ENST00000544093 SLC52A1Q9NWF4 448 aa35.24■■■■□ 3.23
CHFR-222ENST00000544093 IQSEC2Q5JU85 1478 aa35.22■■■■□ 3.23
CHFR-222ENST00000544093 SLIT1O75093 1534 aa35.22■■■■□ 3.23
CHFR-222ENST00000544093 NUP155O75694 1391 aa35.22■■■■□ 3.23
CHFR-222ENST00000544093 STAG3Q9UJ98 1225 aa35.21■■■■□ 3.23
CHFR-222ENST00000544093 NPHP4O75161 1426 aaPredicted RBP35.21■■■■□ 3.23
CHFR-222ENST00000544093 ARHGAP23Q9P227 1491 aa35.2■■■■□ 3.23
CHFR-222ENST00000544093 IQGAP1P46940 1657 aa35.2■■■■□ 3.23
CHFR-222ENST00000544093 ZNF335Q9H4Z2 1342 aaPredicted RBP35.18■■■■□ 3.22
CHFR-222ENST00000544093 IDI1Q13907 227 aa35.18■■■■□ 3.22
CHFR-222ENST00000544093 E9PCH4 1651 aa35.17■■■■□ 3.22
CHFR-222ENST00000544093 SCAF11Q99590 1463 aaKnown RBP35.16■■■■□ 3.22
CHFR-222ENST00000544093 NAIPQ13075 1403 aa35.15■■■■□ 3.22
CHFR-222ENST00000544093 EID1Q9Y6B2 187 aa35.14■■■■□ 3.22
CHFR-222ENST00000544093 ADGRB3O60242 1522 aa35.14■■■■□ 3.22
CHFR-222ENST00000544093 HFM1A2PYH4 1435 aa35.13■■■■□ 3.21
CHFR-222ENST00000544093 TMEM2Q9UHN6 1383 aa35.13■■■■□ 3.21
CHFR-222ENST00000544093 TXNDC2Q86VQ3 553 aa35.1■■■■□ 3.21
CHFR-222ENST00000544093 CPS1P31327 1500 aa35.08■■■■□ 3.21
CHFR-222ENST00000544093 LTKP29376 864 aa35.05■■■■□ 3.2
CHFR-222ENST00000544093 TMEM131LA2VDJ0 1609 aa34.99■■■■□ 3.19
CHFR-222ENST00000544093 HDGFP51858 240 aaKnown RBP34.97■■■■□ 3.19
CHFR-222ENST00000544093 SPHKAPQ2M3C7 1700 aa34.96■■■■□ 3.19
CHFR-222ENST00000544093 MYO5BQ9ULV0 1848 aa34.95■■■■□ 3.19
CHFR-222ENST00000544093 ZFYVE9O95405 1425 aa34.89■■■■□ 3.18
CHFR-222ENST00000544093 TRIM52Q96A61 297 aa34.89■■■■□ 3.18
CHFR-222ENST00000544093 CHGAP10645 457 aaKnown RBP34.87■■■■□ 3.17
CHFR-222ENST00000544093 RIMS2Q9UQ26 1411 aa34.87■■■■□ 3.17
CHFR-222ENST00000544093 ACIN1Q9UKV3 1341 aaKnown RBP34.86■■■■□ 3.17
CHFR-222ENST00000544093 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.86■■■■□ 3.17
CHFR-222ENST00000544093 STRCP1A6NGW2 1772 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms