RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
PDCD2-208ENST00000541970 ROCK1Q13464 1354 aa22.12■■□□□ 1.13
PDCD2-208ENST00000541970 DENND4BO75064 1496 aaPredicted RBP22.12■■□□□ 1.13
PDCD2-208ENST00000541970 AFAP1Q8N556 730 aa22.12■■□□□ 1.13
PDCD2-208ENST00000541970 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
PDCD2-208ENST00000541970 FRAT1Q92837 279 aaPredicted RBP22.1■■□□□ 1.13
PDCD2-208ENST00000541970 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
PDCD2-208ENST00000541970 ARXQ96QS3 562 aa22.09■■□□□ 1.13
PDCD2-208ENST00000541970 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
PDCD2-208ENST00000541970 RPRD2Q5VT52 1461 aaKnown RBP22.07■■□□□ 1.12
PDCD2-208ENST00000541970 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
PDCD2-208ENST00000541970 NFKBIBQ15653 356 aa22.06■■□□□ 1.12
PDCD2-208ENST00000541970 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
PDCD2-208ENST00000541970 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
PDCD2-208ENST00000541970 WASHC2CQ9Y4E1 1318 aa22.01■■□□□ 1.11
PDCD2-208ENST00000541970 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
PDCD2-208ENST00000541970 NUP160Q12769 1436 aa22.01■■□□□ 1.11
PDCD2-208ENST00000541970 BACH2Q9BYV9 841 aa22.01■■□□□ 1.11
PDCD2-208ENST00000541970 KIF3BO15066 747 aa22■■□□□ 1.11
PDCD2-208ENST00000541970 NPM1P06748 294 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDCD2-208ENST00000541970 PZPP20742 1482 aa21.99■■□□□ 1.11
PDCD2-208ENST00000541970 CCDC144AA2RUR9 1427 aa21.98■■□□□ 1.11
PDCD2-208ENST00000541970 PLIN1O60240 522 aa21.98■■□□□ 1.11
PDCD2-208ENST00000541970 DNMT1P26358 1616 aaKnown RBP21.98■■□□□ 1.11
PDCD2-208ENST00000541970 DDRGK1Q96HY6 314 aa21.98■■□□□ 1.11
PDCD2-208ENST00000541970 SPAG9O60271 1321 aaKnown RBP21.97■■□□□ 1.11
PDCD2-208ENST00000541970 RRP1P56182 461 aaKnown RBP21.97■■□□□ 1.11
PDCD2-208ENST00000541970 RCAN3Q9UKA8 241 aa21.95■■□□□ 1.1
PDCD2-208ENST00000541970 GCC2Q8IWJ2 1684 aa21.94■■□□□ 1.1
PDCD2-208ENST00000541970 GGT6Q6P531 493 aa21.93■■□□□ 1.1
PDCD2-208ENST00000541970 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
PDCD2-208ENST00000541970 PKNOX2Q96KN3 472 aa21.92■■□□□ 1.1
PDCD2-208ENST00000541970 KDM5BQ9UGL1 1544 aa21.92■■□□□ 1.1
PDCD2-208ENST00000541970 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
PDCD2-208ENST00000541970 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
PDCD2-208ENST00000541970 TEX14Q8IWB6 1497 aa21.89■■□□□ 1.1
PDCD2-208ENST00000541970 RSPH6AQ9H0K4 717 aa21.87■■□□□ 1.09
PDCD2-208ENST00000541970 PANK3Q9H999 370 aa21.87■■□□□ 1.09
PDCD2-208ENST00000541970 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
PDCD2-208ENST00000541970 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
PDCD2-208ENST00000541970 TNNT2P45379 298 aaPredicted RBP21.85■■□□□ 1.09
PDCD2-208ENST00000541970 CCDC141Q6ZP82 1450 aa21.84■■□□□ 1.09
PDCD2-208ENST00000541970 RGS3P49796 1198 aa21.84■■□□□ 1.09
PDCD2-208ENST00000541970 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
PDCD2-208ENST00000541970 VSIG10Q8N0Z9 540 aa21.84■■□□□ 1.09
PDCD2-208ENST00000541970 SYCP2Q9BX26 1530 aa21.83■■□□□ 1.09
PDCD2-208ENST00000541970 MS4A1P11836 297 aa21.82■■□□□ 1.08
PDCD2-208ENST00000541970 TMF1P82094 1093 aa21.82■■□□□ 1.08
PDCD2-208ENST00000541970 PNISRQ8TF01 805 aaKnown RBP21.82■■□□□ 1.08
PDCD2-208ENST00000541970 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
PDCD2-208ENST00000541970 CDCA7LQ96GN5 454 aa21.81■■□□□ 1.08
PDCD2-208ENST00000541970 CRBNQ96SW2 442 aa21.81■■□□□ 1.08
PDCD2-208ENST00000541970 SAFB2Q14151 953 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDCD2-208ENST00000541970 NAP1L5Q96NT1 182 aaPredicted RBP21.8■■□□□ 1.08
PDCD2-208ENST00000541970 GLIPR1L2Q4G1C9 344 aa21.79■■□□□ 1.08
PDCD2-208ENST00000541970 KNSTRNQ9Y448 316 aa21.79■■□□□ 1.08
PDCD2-208ENST00000541970 ABCC10Q5T3U5 1492 aa21.78■■□□□ 1.08
PDCD2-208ENST00000541970 ABCA8O94911 1581 aa21.77■■□□□ 1.07
PDCD2-208ENST00000541970 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
PDCD2-208ENST00000541970 KTN1Q86UP2 1357 aaKnown RBP21.75■■□□□ 1.07
PDCD2-208ENST00000541970 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
PDCD2-208ENST00000541970 ARID4BQ4LE39 1312 aaPredicted RBP21.74■■□□□ 1.07
PDCD2-208ENST00000541970 SPATA31E1Q6ZUB1 1445 aa21.73■■□□□ 1.07
PDCD2-208ENST00000541970 WDR43Q15061 677 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDCD2-208ENST00000541970 SLKQ9H2G2 1235 aaPredicted RBP21.73■■□□□ 1.07
PDCD2-208ENST00000541970 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
PDCD2-208ENST00000541970 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
PDCD2-208ENST00000541970 MYBBP1AQ9BQG0 1328 aaKnown RBP21.72■■□□□ 1.07
PDCD2-208ENST00000541970 CFAP70Q5T0N1 1121 aa21.71■■□□□ 1.07
PDCD2-208ENST00000541970 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
PDCD2-208ENST00000541970 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.07
PDCD2-208ENST00000541970 ADGRL2O95490 1459 aa21.7■■□□□ 1.06
PDCD2-208ENST00000541970 NEUROD2Q15784 382 aa21.7■■□□□ 1.06
PDCD2-208ENST00000541970 POGKQ9P215 609 aa21.7■■□□□ 1.06
PDCD2-208ENST00000541970 RALBP1Q15311 655 aa21.7■■□□□ 1.06
PDCD2-208ENST00000541970 NLRP13Q86W25 1043 aa21.7■■□□□ 1.06
PDCD2-208ENST00000541970 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
PDCD2-208ENST00000541970 FAM135AQ9P2D6 1515 aa21.69■■□□□ 1.06
PDCD2-208ENST00000541970 CCDC146Q8IYE0 955 aa21.68■■□□□ 1.06
PDCD2-208ENST00000541970 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
PDCD2-208ENST00000541970 CHD1O14646 1710 aa21.68■■□□□ 1.06
PDCD2-208ENST00000541970 KANK1Q14678 1352 aa21.67■■□□□ 1.06
PDCD2-208ENST00000541970 C20orf194Q5TEA3 1177 aa21.66■■□□□ 1.06
PDCD2-208ENST00000541970 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
PDCD2-208ENST00000541970 DISP3Q9P2K9 1392 aa21.65■■□□□ 1.06
PDCD2-208ENST00000541970 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
PDCD2-208ENST00000541970 TMEM132EQ6IEE7 984 aa21.65■■□□□ 1.06
PDCD2-208ENST00000541970 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
PDCD2-208ENST00000541970 RRAGDQ9NQL2 400 aaPredicted RBP21.65■■□□□ 1.06
PDCD2-208ENST00000541970 SAMD9LQ8IVG5 1584 aa21.65■■□□□ 1.06
PDCD2-208ENST00000541970 STK26Q9P289 416 aa21.64■■□□□ 1.06
PDCD2-208ENST00000541970 GZF1Q9H116 711 aaPredicted RBP21.64■■□□□ 1.05
PDCD2-208ENST00000541970 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
PDCD2-208ENST00000541970 ZMYND15Q9H091 742 aa21.63■■□□□ 1.05
PDCD2-208ENST00000541970 MLECQ14165 292 aa21.63■■□□□ 1.05
PDCD2-208ENST00000541970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.62■■□□□ 1.051e-6■■□□□ 13.9
PDCD2-208ENST00000541970 FAM161AQ3B820 660 aa21.62■■□□□ 1.05
PDCD2-208ENST00000541970 ADGBQ8N7X0 1667 aa21.61■■□□□ 1.05
PDCD2-208ENST00000541970 SPRYD3Q8NCJ5 442 aa21.61■■□□□ 1.05
PDCD2-208ENST00000541970 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms