RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
PRKAB1-206ENST00000541640 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
PRKAB1-206ENST00000541640 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
PRKAB1-206ENST00000541640 PLCH2O75038 1416 aa18.2■□□□□ 0.5
PRKAB1-206ENST00000541640 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
PRKAB1-206ENST00000541640 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
PRKAB1-206ENST00000541640 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
PRKAB1-206ENST00000541640 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
PRKAB1-206ENST00000541640 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
PRKAB1-206ENST00000541640 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
PRKAB1-206ENST00000541640 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
PRKAB1-206ENST00000541640 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
PRKAB1-206ENST00000541640 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
PRKAB1-206ENST00000541640 PLA2R1Q13018 1463 aa18.18■□□□□ 0.5
PRKAB1-206ENST00000541640 ERBINQ96RT1 1412 aa18.17■□□□□ 0.5
PRKAB1-206ENST00000541640 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
PRKAB1-206ENST00000541640 ABCC1P33527 1531 aa18.17■□□□□ 0.5
PRKAB1-206ENST00000541640 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
PRKAB1-206ENST00000541640 E9PCH4 1651 aa18.15■□□□□ 0.5
PRKAB1-206ENST00000541640 ATP10AO60312 1499 aa18.15■□□□□ 0.5
PRKAB1-206ENST00000541640 LAMC1P11047 1609 aa18.14■□□□□ 0.5
PRKAB1-206ENST00000541640 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
PRKAB1-206ENST00000541640 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
PRKAB1-206ENST00000541640 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
PRKAB1-206ENST00000541640 ERICH6BQ5W0A0 696 aa18.13■□□□□ 0.49
PRKAB1-206ENST00000541640 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
PRKAB1-206ENST00000541640 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
PRKAB1-206ENST00000541640 A2MP01023 1474 aa18.12■□□□□ 0.49
PRKAB1-206ENST00000541640 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
PRKAB1-206ENST00000541640 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
PRKAB1-206ENST00000541640 EIF2AK4Q9P2K8 1649 aaKnown RBP18.1■□□□□ 0.49
PRKAB1-206ENST00000541640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKAB1-206ENST00000541640 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
PRKAB1-206ENST00000541640 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
PRKAB1-206ENST00000541640 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
PRKAB1-206ENST00000541640 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
PRKAB1-206ENST00000541640 WDR7Q9Y4E6 1490 aa18.05■□□□□ 0.48
PRKAB1-206ENST00000541640 RGL3Q3MIN7 710 aa18.04■□□□□ 0.48
PRKAB1-206ENST00000541640 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
PRKAB1-206ENST00000541640 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
PRKAB1-206ENST00000541640 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
PRKAB1-206ENST00000541640 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
PRKAB1-206ENST00000541640 RALBP1Q15311 655 aa18.03■□□□□ 0.48
PRKAB1-206ENST00000541640 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
PRKAB1-206ENST00000541640 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.48
PRKAB1-206ENST00000541640 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.48
PRKAB1-206ENST00000541640 DEPDC5O75140 1603 aa18.02■□□□□ 0.48
PRKAB1-206ENST00000541640 COL17A1Q9UMD9 1497 aaPredicted RBP18.02■□□□□ 0.47
PRKAB1-206ENST00000541640 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.47
PRKAB1-206ENST00000541640 ABCA9Q8IUA7 1624 aa18.02■□□□□ 0.47
PRKAB1-206ENST00000541640 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
PRKAB1-206ENST00000541640 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
PRKAB1-206ENST00000541640 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
PRKAB1-206ENST00000541640 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
PRKAB1-206ENST00000541640 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
PRKAB1-206ENST00000541640 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
PRKAB1-206ENST00000541640 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
PRKAB1-206ENST00000541640 TRPM2O94759 1503 aa17.99■□□□□ 0.47
PRKAB1-206ENST00000541640 CEP152O94986 1710 aa17.98■□□□□ 0.47
PRKAB1-206ENST00000541640 SPHKAPQ2M3C7 1700 aa17.97■□□□□ 0.47
PRKAB1-206ENST00000541640 TESK2Q96S53 571 aa17.97■□□□□ 0.47
PRKAB1-206ENST00000541640 TET3O43151 1660 aa17.96■□□□□ 0.47
PRKAB1-206ENST00000541640 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
PRKAB1-206ENST00000541640 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
PRKAB1-206ENST00000541640 MADDQ8WXG6 1647 aa17.96■□□□□ 0.47
PRKAB1-206ENST00000541640 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
PRKAB1-206ENST00000541640 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
PRKAB1-206ENST00000541640 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
PRKAB1-206ENST00000541640 PTPRTO14522 1441 aa17.95■□□□□ 0.46
PRKAB1-206ENST00000541640 VWDEQ8N2E2 1590 aa17.95■□□□□ 0.46
PRKAB1-206ENST00000541640 FANCAO15360 1455 aa17.95■□□□□ 0.46
PRKAB1-206ENST00000541640 WASHC2CQ9Y4E1 1318 aa17.94■□□□□ 0.46
PRKAB1-206ENST00000541640 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
PRKAB1-206ENST00000541640 PER1O15534 1290 aaPredicted RBP17.93■□□□□ 0.46
PRKAB1-206ENST00000541640 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
PRKAB1-206ENST00000541640 CLTCL1P53675 1640 aa17.92■□□□□ 0.46
PRKAB1-206ENST00000541640 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
PRKAB1-206ENST00000541640 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
PRKAB1-206ENST00000541640 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
PRKAB1-206ENST00000541640 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
PRKAB1-206ENST00000541640 TMF1P82094 1093 aa17.89■□□□□ 0.46
PRKAB1-206ENST00000541640 ADGRL1O94910 1474 aa17.89■□□□□ 0.45
PRKAB1-206ENST00000541640 KANK1Q14678 1352 aa17.88■□□□□ 0.45
PRKAB1-206ENST00000541640 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
PRKAB1-206ENST00000541640 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
PRKAB1-206ENST00000541640 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
PRKAB1-206ENST00000541640 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
PRKAB1-206ENST00000541640 INSRP06213 1382 aa17.85■□□□□ 0.45
PRKAB1-206ENST00000541640 PANK3Q9H999 370 aa17.83■□□□□ 0.45
PRKAB1-206ENST00000541640 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.45
PRKAB1-206ENST00000541640 CD109Q6YHK3 1445 aa17.83■□□□□ 0.44
PRKAB1-206ENST00000541640 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
PRKAB1-206ENST00000541640 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
PRKAB1-206ENST00000541640 KIF3BO15066 747 aa17.81■□□□□ 0.44
PRKAB1-206ENST00000541640 SYNMO15061 1565 aa17.8■□□□□ 0.44
PRKAB1-206ENST00000541640 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
PRKAB1-206ENST00000541640 KIF1BO60333 1816 aa17.79■□□□□ 0.44
PRKAB1-206ENST00000541640 MYOM2P54296 1465 aa17.79■□□□□ 0.44
PRKAB1-206ENST00000541640 LMTK2Q8IWU2 1503 aa17.78■□□□□ 0.44
PRKAB1-206ENST00000541640 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms