RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
CDKN3-206ENST00000541304 RUSC2Q8N2Y8 1516 aa9.33□□□□□ -0.92
CDKN3-206ENST00000541304 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
CDKN3-206ENST00000541304 VARS2Q5ST30 1063 aaKnown RBP9.32□□□□□ -0.92
CDKN3-206ENST00000541304 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
CDKN3-206ENST00000541304 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
CDKN3-206ENST00000541304 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
CDKN3-206ENST00000541304 GRIN2AQ12879 1464 aa9.29□□□□□ -0.92
CDKN3-206ENST00000541304 SLC34A2O95436 690 aa9.28□□□□□ -0.92
CDKN3-206ENST00000541304 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
CDKN3-206ENST00000541304 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
CDKN3-206ENST00000541304 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDKN3-206ENST00000541304 NUP160Q12769 1436 aa9.25□□□□□ -0.93
CDKN3-206ENST00000541304 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
CDKN3-206ENST00000541304 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
CDKN3-206ENST00000541304 TNIKQ9UKE5 1360 aa9.24□□□□□ -0.93
CDKN3-206ENST00000541304 FOXK1P85037 733 aa9.24□□□□□ -0.93
CDKN3-206ENST00000541304 ZNF687Q8N1G0 1237 aa9.24□□□□□ -0.93
CDKN3-206ENST00000541304 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
CDKN3-206ENST00000541304 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
CDKN3-206ENST00000541304 KIAA0586Q9BVV6 1533 aa9.23□□□□□ -0.93
CDKN3-206ENST00000541304 NUDT7P0C024 238 aa9.23□□□□□ -0.93
CDKN3-206ENST00000541304 IQGAP2Q13576 1575 aa9.21□□□□□ -0.93
CDKN3-206ENST00000541304 PLPP6Q8IY26 295 aa9.21□□□□□ -0.94
CDKN3-206ENST00000541304 CHD1O14646 1710 aa9.21□□□□□ -0.94
CDKN3-206ENST00000541304 EFCAB5A4FU69 1503 aa9.21□□□□□ -0.94
CDKN3-206ENST00000541304 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
CDKN3-206ENST00000541304 DSG2Q14126 1118 aa9.2□□□□□ -0.94
CDKN3-206ENST00000541304 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
CDKN3-206ENST00000541304 CEP170Q5SW79 1584 aa9.19□□□□□ -0.94
CDKN3-206ENST00000541304 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
CDKN3-206ENST00000541304 PTCD2Q8WV60 388 aaKnown RBP9.18□□□□□ -0.94
CDKN3-206ENST00000541304 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
CDKN3-206ENST00000541304 UGGT2Q9NYU1 1516 aa9.18□□□□□ -0.94
CDKN3-206ENST00000541304 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
CDKN3-206ENST00000541304 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
CDKN3-206ENST00000541304 CEP162Q5TB80 1403 aa9.15□□□□□ -0.94
CDKN3-206ENST00000541304 CARMIL2Q6F5E8 1435 aa9.15□□□□□ -0.94
CDKN3-206ENST00000541304 CLIP1P30622 1438 aa9.14□□□□□ -0.95
CDKN3-206ENST00000541304 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
CDKN3-206ENST00000541304 TBC1D12O60347 775 aa9.14□□□□□ -0.95
CDKN3-206ENST00000541304 PBX2P40425 430 aa9.14□□□□□ -0.95
CDKN3-206ENST00000541304 AMER1Q5JTC6 1135 aaPredicted RBP9.14□□□□□ -0.95
CDKN3-206ENST00000541304 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
CDKN3-206ENST00000541304 SAMD9Q5K651 1589 aa9.14□□□□□ -0.95
CDKN3-206ENST00000541304 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
CDKN3-206ENST00000541304 PDE4AP27815 886 aa9.12□□□□□ -0.95
CDKN3-206ENST00000541304 PTGER2P43116 358 aa9.12□□□□□ -0.95
CDKN3-206ENST00000541304 KDM4FA0A1W2PPD8 638 aa9.11□□□□□ -0.95
CDKN3-206ENST00000541304 KIAA0556O60303 1618 aa9.11□□□□□ -0.95
CDKN3-206ENST00000541304 FMN1Q68DA7 1419 aa9.11□□□□□ -0.95
CDKN3-206ENST00000541304 LSM11P83369 360 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDKN3-206ENST00000541304 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
CDKN3-206ENST00000541304 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
CDKN3-206ENST00000541304 OXER1Q8TDS5 423 aa9.09□□□□□ -0.95
CDKN3-206ENST00000541304 UPF1Q92900 1129 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDKN3-206ENST00000541304 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.95
CDKN3-206ENST00000541304 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
CDKN3-206ENST00000541304 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
CDKN3-206ENST00000541304 DDX27Q96GQ7 796 aaKnown RBP9.08□□□□□ -0.96
CDKN3-206ENST00000541304 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
CDKN3-206ENST00000541304 DISP1Q96F81 1524 aa9.08□□□□□ -0.96
CDKN3-206ENST00000541304 PRG4Q92954 1404 aaPredicted RBP9.07□□□□□ -0.96
CDKN3-206ENST00000541304 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
CDKN3-206ENST00000541304 MFSD10Q14728 455 aa9.06□□□□□ -0.96
CDKN3-206ENST00000541304 POTEEQ6S8J3 1075 aa9.06□□□□□ -0.96
CDKN3-206ENST00000541304 LARP6Q9BRS8 491 aaKnown RBP9.06□□□□□ -0.96
CDKN3-206ENST00000541304 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
CDKN3-206ENST00000541304 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
CDKN3-206ENST00000541304 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
CDKN3-206ENST00000541304 ARAP1Q96P48 1450 aa9.04□□□□□ -0.96
CDKN3-206ENST00000541304 FYCO1Q9BQS8 1478 aa9.04□□□□□ -0.96
CDKN3-206ENST00000541304 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
CDKN3-206ENST00000541304 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
CDKN3-206ENST00000541304 FHOD3Q2V2M9 1422 aa9.03□□□□□ -0.96
CDKN3-206ENST00000541304 PTPRGP23470 1445 aa9.02□□□□□ -0.97
CDKN3-206ENST00000541304 CASKIN1Q8WXD9 1431 aa9.02□□□□□ -0.97
CDKN3-206ENST00000541304 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.97
CDKN3-206ENST00000541304 HECW1Q76N89 1606 aa9.02□□□□□ -0.97
CDKN3-206ENST00000541304 ARHGEF11O15085 1522 aa9.01□□□□□ -0.97
CDKN3-206ENST00000541304 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
CDKN3-206ENST00000541304 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
CDKN3-206ENST00000541304 UHRF1BP1LA0JNW5 1464 aa9.01□□□□□ -0.97
CDKN3-206ENST00000541304 MAP3K1Q13233 1512 aa9□□□□□ -0.97
CDKN3-206ENST00000541304 RAPGEF6Q8TEU7 1601 aa8.99□□□□□ -0.97
CDKN3-206ENST00000541304 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
CDKN3-206ENST00000541304 ZNF454Q8N9F8 522 aa8.99□□□□□ -0.97
CDKN3-206ENST00000541304 ABCA8O94911 1581 aa8.99□□□□□ -0.97
CDKN3-206ENST00000541304 UACAQ9BZF9 1416 aa8.98□□□□□ -0.97
CDKN3-206ENST00000541304 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
CDKN3-206ENST00000541304 ABCC2Q92887 1545 aa8.98□□□□□ -0.97
CDKN3-206ENST00000541304 PCF11O94913 1555 aaKnown RBP8.98□□□□□ -0.97
CDKN3-206ENST00000541304 TK2O00142 265 aa8.97□□□□□ -0.97
CDKN3-206ENST00000541304 EVI5O60447 810 aa8.97□□□□□ -0.97
CDKN3-206ENST00000541304 RANGAP1P46060 587 aaPredicted RBP8.97□□□□□ -0.97
CDKN3-206ENST00000541304 PSEN2P49810 448 aa8.97□□□□□ -0.97
CDKN3-206ENST00000541304 KCNK17Q96T54 332 aa8.97□□□□□ -0.97
CDKN3-206ENST00000541304 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.98
CDKN3-206ENST00000541304 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.98
CDKN3-206ENST00000541304 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms