RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MMRN1Q13201 1228 aa8.07□□□□□ -1.12
SNHG1-214ENST00000540865 ILDR2Q71H61 639 aa8.06□□□□□ -1.12
SNHG1-214ENST00000540865 KIAA0556O60303 1618 aa8.06□□□□□ -1.12
SNHG1-214ENST00000540865 KIF21BO75037 1637 aa8.06□□□□□ -1.12
SNHG1-214ENST00000540865 RAPGEF2Q9Y4G8 1499 aa8.06□□□□□ -1.12
SNHG1-214ENST00000540865 ARID4BQ4LE39 1312 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-214ENST00000540865 ADAMTSL3P82987 1691 aa8.05□□□□□ -1.12
SNHG1-214ENST00000540865 CFAP43Q8NDM7 1665 aa8.05□□□□□ -1.12
SNHG1-214ENST00000540865 RAPGEF3O95398 923 aa8.05□□□□□ -1.12
SNHG1-214ENST00000540865 SPNS2Q8IVW8 549 aa8.05□□□□□ -1.12
SNHG1-214ENST00000540865 MARVELD3Q96A59 401 aa8.05□□□□□ -1.12
SNHG1-214ENST00000540865 DISP3Q9P2K9 1392 aa8.05□□□□□ -1.12
SNHG1-214ENST00000540865 GOLGA3Q08378 1498 aa8.03□□□□□ -1.12
SNHG1-214ENST00000540865 CHRM1P11229 460 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-214ENST00000540865 HSPA2P54652 639 aa8.03□□□□□ -1.12
SNHG1-214ENST00000540865 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-214ENST00000540865 ABCA8O94911 1581 aa8.02□□□□□ -1.13
SNHG1-214ENST00000540865 FAM9AQ8IZU1 332 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-214ENST00000540865 OCEL1Q9H607 264 aa8.02□□□□□ -1.13
SNHG1-214ENST00000540865 PCDHB8Q9UN66 801 aa8.02□□□□□ -1.13
SNHG1-214ENST00000540865 NEO1Q92859 1461 aa8.01□□□□□ -1.13
SNHG1-214ENST00000540865 RIOK3O14730 519 aaKnown RBP8□□□□□ -1.13
SNHG1-214ENST00000540865 EIF2AK3Q9NZJ5 1116 aaKnown RBP8□□□□□ -1.13
SNHG1-214ENST00000540865 BCORL1Q5H9F3 1711 aa7.99□□□□□ -1.13
SNHG1-214ENST00000540865 MADDQ8WXG6 1647 aa7.99□□□□□ -1.13
SNHG1-214ENST00000540865 ATP10BO94823 1461 aa7.99□□□□□ -1.13
SNHG1-214ENST00000540865 POGZQ7Z3K3 1410 aa7.98□□□□□ -1.13
SNHG1-214ENST00000540865 ARID3CA6NKF2 412 aa7.97□□□□□ -1.13
SNHG1-214ENST00000540865 SNPHO15079 494 aa7.97□□□□□ -1.13
SNHG1-214ENST00000540865 ABCA9Q8IUA7 1624 aa7.96□□□□□ -1.13
SNHG1-214ENST00000540865 CHGAP10645 457 aaKnown RBP7.96□□□□□ -1.14
SNHG1-214ENST00000540865 FHOD3Q2V2M9 1422 aa7.95□□□□□ -1.14
SNHG1-214ENST00000540865 AKNAQ7Z591 1439 aa7.95□□□□□ -1.14
SNHG1-214ENST00000540865 DENND4BO75064 1496 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-214ENST00000540865 EMP3P54852 163 aa7.95□□□□□ -1.14
SNHG1-214ENST00000540865 YEATS2Q9ULM3 1422 aa7.95□□□□□ -1.14
SNHG1-214ENST00000540865 FANCAO15360 1455 aa7.94□□□□□ -1.14
SNHG1-214ENST00000540865 FRMPD1Q5SYB0 1578 aa7.94□□□□□ -1.14
SNHG1-214ENST00000540865 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-214ENST00000540865 VGFO15240 615 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-214ENST00000540865 ZNF467Q7Z7K2 595 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-214ENST00000540865 PDCD7Q8N8D1 485 aaKnown RBP7.94□□□□□ -1.14
SNHG1-214ENST00000540865 ZFP91Q96JP5 570 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-214ENST00000540865 ARHGEF40Q8TER5 1519 aa7.93□□□□□ -1.14
SNHG1-214ENST00000540865 C3orf67Q6ZVT6 689 aa7.93□□□□□ -1.14
SNHG1-214ENST00000540865 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
SNHG1-214ENST00000540865 P3H3Q8IVL6 736 aa7.92□□□□□ -1.14
SNHG1-214ENST00000540865 MAGI2Q86UL8 1455 aa7.92□□□□□ -1.14
SNHG1-214ENST00000540865 PLEKHD1A6NEE1 506 aa7.91□□□□□ -1.14
SNHG1-214ENST00000540865 STK25O00506 426 aa7.91□□□□□ -1.14
SNHG1-214ENST00000540865 MLECQ14165 292 aa7.91□□□□□ -1.14
SNHG1-214ENST00000540865 SPATA31D1Q6ZQQ2 1576 aa7.91□□□□□ -1.14
SNHG1-214ENST00000540865 PRXQ9BXM0 1461 aa7.9□□□□□ -1.14
SNHG1-214ENST00000540865 POTEB3A0JP26 581 aa7.9□□□□□ -1.14
SNHG1-214ENST00000540865 PSEN1P49768 467 aa7.9□□□□□ -1.14
SNHG1-214ENST00000540865 POTEBQ6S5H4 581 aa7.9□□□□□ -1.14
SNHG1-214ENST00000540865 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
SNHG1-214ENST00000540865 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
SNHG1-214ENST00000540865 ZMYM4Q5VZL5 1548 aa7.89□□□□□ -1.15
SNHG1-214ENST00000540865 PTPRTO14522 1441 aa7.89□□□□□ -1.15
SNHG1-214ENST00000540865 PDAP1Q13442 181 aaKnown RBP7.89□□□□□ -1.15
SNHG1-214ENST00000540865 HS6ST3Q8IZP7 471 aa7.89□□□□□ -1.15
SNHG1-214ENST00000540865 HS3ST6Q96QI5 342 aa7.89□□□□□ -1.15
SNHG1-214ENST00000540865 BCL11BQ9C0K0 894 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-214ENST00000540865 STK24Q9Y6E0 443 aa7.89□□□□□ -1.15
SNHG1-214ENST00000540865 EFCAB5A4FU69 1503 aa7.88□□□□□ -1.15
SNHG1-214ENST00000540865 ZFYVE16Q7Z3T8 1539 aa7.88□□□□□ -1.15
SNHG1-214ENST00000540865 FAM205CA6NFA0 338 aa7.88□□□□□ -1.15
SNHG1-214ENST00000540865 CEBPAP49715 358 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-214ENST00000540865 TAOK2Q9UL54 1235 aa7.88□□□□□ -1.15
SNHG1-214ENST00000540865 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
SNHG1-214ENST00000540865 IQSEC2Q5JU85 1478 aa7.87□□□□□ -1.15
SNHG1-214ENST00000540865 UHRF1BP1Q6BDS2 1440 aa7.87□□□□□ -1.15
SNHG1-214ENST00000540865 CTTNBP2Q8WZ74 1663 aa7.87□□□□□ -1.15
SNHG1-214ENST00000540865 GOLGA2Q08379 1002 aa7.87□□□□□ -1.15
SNHG1-214ENST00000540865 ARHGEF12Q9NZN5 1544 aa7.87□□□□□ -1.15
SNHG1-214ENST00000540865 NUP153P49790 1475 aaKnown RBP7.87□□□□□ -1.15
SNHG1-214ENST00000540865 MKRN3Q13064 507 aaKnown RBP7.86□□□□□ -1.15
SNHG1-214ENST00000540865 ATP10AO60312 1499 aa7.86□□□□□ -1.15
SNHG1-214ENST00000540865 RICTORQ6R327 1708 aa7.86□□□□□ -1.15
SNHG1-214ENST00000540865 SCAPERQ9BY12 1400 aa7.86□□□□□ -1.15
SNHG1-214ENST00000540865 C9orf84Q5VXU9 1444 aa7.85□□□□□ -1.15
SNHG1-214ENST00000540865 RAPGEF6Q8TEU7 1601 aa7.85□□□□□ -1.15
SNHG1-214ENST00000540865 CFAP74Q9C0B2 1584 aa7.84□□□□□ -1.15
SNHG1-214ENST00000540865 BBXQ8WY36 941 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-214ENST00000540865 L3MBTL3Q96JM7 780 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-214ENST00000540865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.15
SNHG1-214ENST00000540865 HECW1Q76N89 1606 aa7.83□□□□□ -1.16
SNHG1-214ENST00000540865 LTBP4Q8N2S1 1624 aa7.83□□□□□ -1.16
SNHG1-214ENST00000540865 NKX1-1Q15270 411 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-214ENST00000540865 PLCH2O75038 1416 aa7.83□□□□□ -1.16
SNHG1-214ENST00000540865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNHG1-214ENST00000540865 PREX1Q8TCU6 1659 aa7.83□□□□□ -1.16
SNHG1-214ENST00000540865 SAMD9Q5K651 1589 aa7.82□□□□□ -1.16
SNHG1-214ENST00000540865 EFCAB2Q5VUJ9 269 aa7.82□□□□□ -1.16
SNHG1-214ENST00000540865 SIGLEC1Q9BZZ2 1709 aa7.82□□□□□ -1.16
SNHG1-214ENST00000540865 CABP2Q9NPB3 220 aa7.82□□□□□ -1.16
SNHG1-214ENST00000540865 STRCQ7RTU9 1775 aa7.82□□□□□ -1.16
SNHG1-214ENST00000540865 TRAPPC8Q9Y2L5 1435 aa7.81□□□□□ -1.16
SNHG1-214ENST00000540865 UBAP1LF5GYI3 381 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms