RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PPP6R1Q9UPN7 881 aa29.53■■■□□ 2.32
DDX55-207ENST00000540763 CNTLNQ9NXG0 1405 aa29.53■■■□□ 2.32
DDX55-207ENST00000540763 MLECQ14165 292 aa29.52■■■□□ 2.32
DDX55-207ENST00000540763 ZC3H13Q5T200 1668 aaKnown RBP29.51■■■□□ 2.31
DDX55-207ENST00000540763 GCC2Q8IWJ2 1684 aa29.51■■■□□ 2.31
DDX55-207ENST00000540763 MROH1Q8NDA8 1641 aa29.5■■■□□ 2.31
DDX55-207ENST00000540763 KIF3BO15066 747 aa29.5■■■□□ 2.31
DDX55-207ENST00000540763 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
DDX55-207ENST00000540763 ANKRD50Q9ULJ7 1429 aa29.48■■■□□ 2.31
DDX55-207ENST00000540763 CLTCQ00610 1675 aaKnown RBP29.48■■■□□ 2.31
DDX55-207ENST00000540763 KDM5DQ9BY66 1539 aa29.47■■■□□ 2.31
DDX55-207ENST00000540763 ITGAEP38570 1179 aa29.47■■■□□ 2.31
DDX55-207ENST00000540763 LMTK3Q96Q04 1460 aa29.46■■■□□ 2.31
DDX55-207ENST00000540763 C3P01024 1663 aa29.44■■■□□ 2.3
DDX55-207ENST00000540763 GGT6Q6P531 493 aa29.43■■■□□ 2.3
DDX55-207ENST00000540763 UNC13BO14795 1591 aa29.41■■■□□ 2.3
DDX55-207ENST00000540763 ESF1Q9H501 851 aaKnown RBP29.41■■■□□ 2.3
DDX55-207ENST00000540763 HFM1A2PYH4 1435 aa29.4■■■□□ 2.3
DDX55-207ENST00000540763 CEP152O94986 1710 aa29.39■■■□□ 2.3
DDX55-207ENST00000540763 VWDEQ8N2E2 1590 aa29.39■■■□□ 2.29
DDX55-207ENST00000540763 NAIPQ13075 1403 aa29.37■■■□□ 2.29
DDX55-207ENST00000540763 ABCC3O15438 1527 aa29.37■■■□□ 2.29
DDX55-207ENST00000540763 PLPPR3Q6T4P5 718 aa29.34■■■□□ 2.29
DDX55-207ENST00000540763 CAMSAP1Q5T5Y3 1602 aa29.34■■■□□ 2.29
DDX55-207ENST00000540763 FBXO41Q8TF61 875 aa29.33■■■□□ 2.29
DDX55-207ENST00000540763 LMTK2Q8IWU2 1503 aa29.33■■■□□ 2.29
DDX55-207ENST00000540763 ZMYM3Q14202 1370 aa29.31■■■□□ 2.28
DDX55-207ENST00000540763 KANK1Q14678 1352 aa29.31■■■□□ 2.28
DDX55-207ENST00000540763 WASHC2CQ9Y4E1 1318 aa29.31■■■□□ 2.28
DDX55-207ENST00000540763 SETD1BQ9UPS6 1966 aaKnown RBP29.3■■■□□ 2.28
DDX55-207ENST00000540763 IQGAP3Q86VI3 1631 aa29.28■■■□□ 2.28
DDX55-207ENST00000540763 PZPP20742 1482 aa29.28■■■□□ 2.28
DDX55-207ENST00000540763 NPATQ14207 1427 aa29.28■■■□□ 2.28
DDX55-207ENST00000540763 HSPA2P54652 639 aa29.26■■■□□ 2.27
DDX55-207ENST00000540763 TET3O43151 1660 aa29.25■■■□□ 2.27
DDX55-207ENST00000540763 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
DDX55-207ENST00000540763 ARHGAP31Q2M1Z3 1444 aa29.24■■■□□ 2.27
DDX55-207ENST00000540763 EFCAB6Q5THR3 1501 aa29.22■■■□□ 2.27
DDX55-207ENST00000540763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.2■■■□□ 2.267e-10■■■■□ 26.7
DDX55-207ENST00000540763 CEBPAP49715 358 aaPredicted RBP29.19■■■□□ 2.26
DDX55-207ENST00000540763 SPATA31D1Q6ZQQ2 1576 aa29.18■■■□□ 2.26
DDX55-207ENST00000540763 ACIN1Q9UKV3 1341 aaKnown RBP29.16■■■□□ 2.26
DDX55-207ENST00000540763 RPRD2Q5VT52 1461 aaKnown RBP29.16■■■□□ 2.26
DDX55-207ENST00000540763 SETD5Q9C0A6 1442 aa29.15■■■□□ 2.26
DDX55-207ENST00000540763 MYO3AQ8NEV4 1616 aa29.15■■■□□ 2.26
DDX55-207ENST00000540763 ZNF142P52746 1687 aaPredicted RBP29.14■■■□□ 2.26
DDX55-207ENST00000540763 NUP155O75694 1391 aa29.13■■■□□ 2.25
DDX55-207ENST00000540763 ERVK-7P63135 1459 aa29.12■■■□□ 2.25
DDX55-207ENST00000540763 CFAP65Q6ZU64 1925 aaKnown RBP29.11■■■□□ 2.25
DDX55-207ENST00000540763 E9PCH4 1651 aa29.11■■■□□ 2.25
DDX55-207ENST00000540763 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
DDX55-207ENST00000540763 TNRQ92752 1358 aa29.06■■■□□ 2.24
DDX55-207ENST00000540763 CEP170BQ9Y4F5 1589 aaPredicted RBP29.04■■■□□ 2.24
DDX55-207ENST00000540763 NLRP1Q9C000 1473 aa29.04■■■□□ 2.24
DDX55-207ENST00000540763 FBXO31Q5XUX0 539 aaPredicted RBP29.03■■■□□ 2.24
DDX55-207ENST00000540763 RAB3GAP2Q9H2M9 1393 aa29.02■■■□□ 2.24
DDX55-207ENST00000540763 NOS1P29475 1434 aa29.02■■■□□ 2.24
DDX55-207ENST00000540763 TRIM26Q12899 539 aaPredicted RBP29■■■□□ 2.23
DDX55-207ENST00000540763 SYNMO15061 1565 aa29■■■□□ 2.23
DDX55-207ENST00000540763 A2ML1A8K2U0 1454 aa28.99■■■□□ 2.23
DDX55-207ENST00000540763 HRCP23327 699 aa28.99■■■□□ 2.23
DDX55-207ENST00000540763 SPHKAPQ2M3C7 1700 aa28.99■■■□□ 2.23
DDX55-207ENST00000540763 KDM5AP29375 1690 aaKnown RBP28.98■■■□□ 2.23
DDX55-207ENST00000540763 CERKQ8TCT0 537 aa28.97■■■□□ 2.23
DDX55-207ENST00000540763 TRIM52Q96A61 297 aa28.97■■■□□ 2.23
DDX55-207ENST00000540763 STRCQ7RTU9 1775 aa28.96■■■□□ 2.23
DDX55-207ENST00000540763 PIK3C2BO00750 1634 aa28.94■■■□□ 2.22
DDX55-207ENST00000540763 DMRT2Q9Y5R5 561 aa28.92■■■□□ 2.22
DDX55-207ENST00000540763 UBR1Q8IWV7 1749 aa28.91■■■□□ 2.22
DDX55-207ENST00000540763 UGGT1Q9NYU2 1555 aa28.9■■■□□ 2.22
DDX55-207ENST00000540763 PTPRTO14522 1441 aa28.89■■■□□ 2.22
DDX55-207ENST00000540763 SLC4A1APQ9BWU0 796 aaKnown RBP28.88■■■□□ 2.21
DDX55-207ENST00000540763 TRPM2O94759 1503 aa28.88■■■□□ 2.21
DDX55-207ENST00000540763 PLA2R1Q13018 1463 aa28.86■■■□□ 2.21
DDX55-207ENST00000540763 SLC52A1Q9NWF4 448 aa28.86■■■□□ 2.21
DDX55-207ENST00000540763 ADGRB3O60242 1522 aa28.84■■■□□ 2.21
DDX55-207ENST00000540763 PKD2Q13563 968 aa28.83■■■□□ 2.21
DDX55-207ENST00000540763 MPHOSPH9Q99550 1183 aa28.82■■■□□ 2.2
DDX55-207ENST00000540763 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
DDX55-207ENST00000540763 TMEM131LA2VDJ0 1609 aa28.79■■■□□ 2.2
DDX55-207ENST00000540763 MYO5BQ9ULV0 1848 aa28.78■■■□□ 2.2
DDX55-207ENST00000540763 IDI1Q13907 227 aa28.78■■■□□ 2.2
DDX55-207ENST00000540763 CLTCL1P53675 1640 aa28.77■■■□□ 2.2
DDX55-207ENST00000540763 THEMISQ8N1K5 641 aaPredicted RBP28.77■■■□□ 2.2
DDX55-207ENST00000540763 KIF1BO60333 1816 aa28.76■■■□□ 2.19
DDX55-207ENST00000540763 SLIT1O75093 1534 aa28.76■■■□□ 2.19
DDX55-207ENST00000540763 ARHGAP23Q9P227 1491 aa28.73■■■□□ 2.19
DDX55-207ENST00000540763 NEURL4Q96JN8 1562 aa28.67■■■□□ 2.18
DDX55-207ENST00000540763 STAG3Q9UJ98 1225 aa28.67■■■□□ 2.18
DDX55-207ENST00000540763 TMEM2Q9UHN6 1383 aa28.66■■■□□ 2.18
DDX55-207ENST00000540763 CCDC144AA2RUR9 1427 aa28.65■■■□□ 2.18
DDX55-207ENST00000540763 FOXD1Q16676 465 aa28.64■■■□□ 2.18
DDX55-207ENST00000540763 MED14O60244 1454 aa28.64■■■□□ 2.17
DDX55-207ENST00000540763 LTBP4Q8N2S1 1624 aa28.63■■■□□ 2.17
DDX55-207ENST00000540763 SCAF11Q99590 1463 aaKnown RBP28.63■■■□□ 2.17
DDX55-207ENST00000540763 ANKLE2Q86XL3 938 aa28.61■■■□□ 2.17
DDX55-207ENST00000540763 IQGAP1P46940 1657 aa28.61■■■□□ 2.17
DDX55-207ENST00000540763 ZFYVE9O95405 1425 aa28.6■■■□□ 2.17
DDX55-207ENST00000540763 ANKRD30BQ9BXX2 1392 aa28.6■■■□□ 2.17
DDX55-207ENST00000540763 IQSEC2Q5JU85 1478 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms