RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.48
TMEM258-205ENST00000540434 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
TMEM258-205ENST00000540434 TIAM1Q13009 1591 aa18.07■□□□□ 0.48
TMEM258-205ENST00000540434 INO80Q9ULG1 1556 aaPredicted RBP18.07■□□□□ 0.48
TMEM258-205ENST00000540434 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
TMEM258-205ENST00000540434 A2MP01023 1474 aa18.07■□□□□ 0.48
TMEM258-205ENST00000540434 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
TMEM258-205ENST00000540434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.483e-7■□□□□ 11
TMEM258-205ENST00000540434 MTUS2Q5JR59 1369 aa18.05■□□□□ 0.48
TMEM258-205ENST00000540434 STRCP1A6NGW2 1772 aa18.05■□□□□ 0.48
TMEM258-205ENST00000540434 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
TMEM258-205ENST00000540434 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
TMEM258-205ENST00000540434 ANKLE2Q86XL3 938 aa18.02■□□□□ 0.48
TMEM258-205ENST00000540434 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
TMEM258-205ENST00000540434 NPHP4O75161 1426 aaPredicted RBP18.01■□□□□ 0.47
TMEM258-205ENST00000540434 EHBP1L1Q8N3D4 1523 aa18.01■□□□□ 0.47
TMEM258-205ENST00000540434 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
TMEM258-205ENST00000540434 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
TMEM258-205ENST00000540434 TNRQ92752 1358 aa18■□□□□ 0.47
TMEM258-205ENST00000540434 NCOA2Q15596 1464 aa17.98■□□□□ 0.47
TMEM258-205ENST00000540434 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
TMEM258-205ENST00000540434 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
TMEM258-205ENST00000540434 MAP3K1Q13233 1512 aa17.97■□□□□ 0.47
TMEM258-205ENST00000540434 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
TMEM258-205ENST00000540434 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
TMEM258-205ENST00000540434 MED14O60244 1454 aa17.95■□□□□ 0.46
TMEM258-205ENST00000540434 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
TMEM258-205ENST00000540434 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
TMEM258-205ENST00000540434 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
TMEM258-205ENST00000540434 THEMISQ8N1K5 641 aaPredicted RBP17.92■□□□□ 0.46
TMEM258-205ENST00000540434 PZPP20742 1482 aa17.9■□□□□ 0.46
TMEM258-205ENST00000540434 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
TMEM258-205ENST00000540434 DHX29Q7Z478 1369 aaKnown RBP17.9■□□□□ 0.46
TMEM258-205ENST00000540434 MBD5Q9P267 1494 aa17.89■□□□□ 0.45
TMEM258-205ENST00000540434 SYNMO15061 1565 aa17.89■□□□□ 0.45
TMEM258-205ENST00000540434 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMEM258-205ENST00000540434 RTEL1-TNFRSF6BF6WH68 1400 aa17.88■□□□□ 0.45
TMEM258-205ENST00000540434 MIA2Q96PC5 1412 aa17.87■□□□□ 0.45
TMEM258-205ENST00000540434 FAM135AQ9P2D6 1515 aa17.87■□□□□ 0.45
TMEM258-205ENST00000540434 XIRP1Q702N8 1843 aaKnown RBP17.86■□□□□ 0.45
TMEM258-205ENST00000540434 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
TMEM258-205ENST00000540434 KIF3BO15066 747 aa17.85■□□□□ 0.45
TMEM258-205ENST00000540434 APLP2Q06481 763 aa17.85■□□□□ 0.45
TMEM258-205ENST00000540434 KDM5DQ9BY66 1539 aa17.85■□□□□ 0.45
TMEM258-205ENST00000540434 NLRP1Q9C000 1473 aa17.85■□□□□ 0.45
TMEM258-205ENST00000540434 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
TMEM258-205ENST00000540434 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
TMEM258-205ENST00000540434 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
TMEM258-205ENST00000540434 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
TMEM258-205ENST00000540434 CAMSAP2Q08AD1 1489 aa17.81■□□□□ 0.44
TMEM258-205ENST00000540434 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
TMEM258-205ENST00000540434 MYOM3Q5VTT5 1437 aa17.8■□□□□ 0.44
TMEM258-205ENST00000540434 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
TMEM258-205ENST00000540434 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
TMEM258-205ENST00000540434 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
TMEM258-205ENST00000540434 LTKP29376 864 aa17.76■□□□□ 0.43
TMEM258-205ENST00000540434 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
TMEM258-205ENST00000540434 UBR1Q8IWV7 1749 aa17.72■□□□□ 0.43
TMEM258-205ENST00000540434 CCDC141Q6ZP82 1450 aa17.72■□□□□ 0.43
TMEM258-205ENST00000540434 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
TMEM258-205ENST00000540434 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
TMEM258-205ENST00000540434 ARHGEF5Q12774 1597 aa17.7■□□□□ 0.42
TMEM258-205ENST00000540434 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
TMEM258-205ENST00000540434 LRP6O75581 1613 aa17.7■□□□□ 0.42
TMEM258-205ENST00000540434 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
TMEM258-205ENST00000540434 ABCC3O15438 1527 aa17.69■□□□□ 0.42
TMEM258-205ENST00000540434 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
TMEM258-205ENST00000540434 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
TMEM258-205ENST00000540434 JCADQ9P266 1359 aa17.67■□□□□ 0.42
TMEM258-205ENST00000540434 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
TMEM258-205ENST00000540434 ABCC5O15440 1437 aa17.67■□□□□ 0.42
TMEM258-205ENST00000540434 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
TMEM258-205ENST00000540434 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
TMEM258-205ENST00000540434 PROSER2Q86WR7 435 aaPredicted RBP17.65■□□□□ 0.42
TMEM258-205ENST00000540434 SLIT1O75093 1534 aa17.65■□□□□ 0.42
TMEM258-205ENST00000540434 MROH1Q8NDA8 1641 aa17.64■□□□□ 0.41
TMEM258-205ENST00000540434 CEP152O94986 1710 aa17.64■□□□□ 0.41
TMEM258-205ENST00000540434 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
TMEM258-205ENST00000540434 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
TMEM258-205ENST00000540434 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
TMEM258-205ENST00000540434 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
TMEM258-205ENST00000540434 RXRBP28702 533 aa17.61■□□□□ 0.41
TMEM258-205ENST00000540434 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
TMEM258-205ENST00000540434 DAPK1P53355 1430 aa17.61■□□□□ 0.41
TMEM258-205ENST00000540434 KCNA6P17658 529 aa17.6■□□□□ 0.41
TMEM258-205ENST00000540434 SLC26A8Q96RN1 970 aa17.6■□□□□ 0.41
TMEM258-205ENST00000540434 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
TMEM258-205ENST00000540434 CHIC2Q9UKJ5 165 aa17.6■□□□□ 0.41
TMEM258-205ENST00000540434 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
TMEM258-205ENST00000540434 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
TMEM258-205ENST00000540434 CROCC2H7BZ55 1655 aa17.58■□□□□ 0.41
TMEM258-205ENST00000540434 EID1Q9Y6B2 187 aa17.58■□□□□ 0.4
TMEM258-205ENST00000540434 RRP7BPQ9NSQ0 103 aa17.56■□□□□ 0.4
TMEM258-205ENST00000540434 PIK3C2BO00750 1634 aa17.55■□□□□ 0.4
TMEM258-205ENST00000540434 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
TMEM258-205ENST00000540434 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
TMEM258-205ENST00000540434 NUTM2BA6NNL0 878 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-205ENST00000540434 NUTM2EB1AL46 878 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-205ENST00000540434 NUTM2AQ8IVF1 878 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-205ENST00000540434 TET3O43151 1660 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms