RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 UHRF1BP1Q6BDS2 1440 aa15.95■□□□□ 0.14
C11orf54-214ENST00000540113 KCNA4P22459 653 aa15.95■□□□□ 0.14
C11orf54-214ENST00000540113 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
C11orf54-214ENST00000540113 ABCC1P33527 1531 aa15.94■□□□□ 0.14
C11orf54-214ENST00000540113 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
C11orf54-214ENST00000540113 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
C11orf54-214ENST00000540113 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
C11orf54-214ENST00000540113 MRS2Q9HD23 443 aa15.92■□□□□ 0.14
C11orf54-214ENST00000540113 USP47Q96K76 1375 aa15.91■□□□□ 0.14
C11orf54-214ENST00000540113 DUOX2Q9NRD8 1548 aa15.9■□□□□ 0.14
C11orf54-214ENST00000540113 TRAPPC8Q9Y2L5 1435 aa15.9■□□□□ 0.14
C11orf54-214ENST00000540113 PLA2R1Q13018 1463 aa15.89■□□□□ 0.13
C11orf54-214ENST00000540113 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
C11orf54-214ENST00000540113 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
C11orf54-214ENST00000540113 EFCAB2Q5VUJ9 269 aa15.87■□□□□ 0.13
C11orf54-214ENST00000540113 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
C11orf54-214ENST00000540113 ERBINQ96RT1 1412 aa15.86■□□□□ 0.13
C11orf54-214ENST00000540113 WDR7Q9Y4E6 1490 aa15.85■□□□□ 0.13
C11orf54-214ENST00000540113 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
C11orf54-214ENST00000540113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
C11orf54-214ENST00000540113 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
C11orf54-214ENST00000540113 ZFYVE16Q7Z3T8 1539 aa15.83■□□□□ 0.13
C11orf54-214ENST00000540113 ABCA9Q8IUA7 1624 aa15.83■□□□□ 0.13
C11orf54-214ENST00000540113 CARD11Q9BXL7 1154 aa15.83■□□□□ 0.12
C11orf54-214ENST00000540113 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.12
C11orf54-214ENST00000540113 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
C11orf54-214ENST00000540113 A2MP01023 1474 aa15.81■□□□□ 0.12
C11orf54-214ENST00000540113 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
C11orf54-214ENST00000540113 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
C11orf54-214ENST00000540113 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
C11orf54-214ENST00000540113 ATP10AO60312 1499 aa15.79■□□□□ 0.12
C11orf54-214ENST00000540113 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
C11orf54-214ENST00000540113 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
C11orf54-214ENST00000540113 AFAP1Q8N556 730 aa15.78■□□□□ 0.12
C11orf54-214ENST00000540113 RTEL1-TNFRSF6BF6WH68 1400 aa15.78■□□□□ 0.12
C11orf54-214ENST00000540113 ASXL2Q76L83 1435 aa15.78■□□□□ 0.12
C11orf54-214ENST00000540113 FANCAO15360 1455 aa15.78■□□□□ 0.12
C11orf54-214ENST00000540113 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
C11orf54-214ENST00000540113 E9PCH4 1651 aa15.77■□□□□ 0.12
C11orf54-214ENST00000540113 DEPDC5O75140 1603 aa15.77■□□□□ 0.11
C11orf54-214ENST00000540113 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
C11orf54-214ENST00000540113 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
C11orf54-214ENST00000540113 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
C11orf54-214ENST00000540113 LAMC1P11047 1609 aa15.73■□□□□ 0.11
C11orf54-214ENST00000540113 ZBED9Q6R2W3 1325 aa15.73■□□□□ 0.11
C11orf54-214ENST00000540113 NBPF1Q3BBV0 1214 aa15.73■□□□□ 0.11
C11orf54-214ENST00000540113 GPRASP1Q5JY77 1395 aa15.72■□□□□ 0.11
C11orf54-214ENST00000540113 ADGRL1O94910 1474 aa15.72■□□□□ 0.11
C11orf54-214ENST00000540113 PRDM15P57071 1507 aaPredicted RBP15.72■□□□□ 0.11
C11orf54-214ENST00000540113 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.11
C11orf54-214ENST00000540113 EIF2AK4Q9P2K8 1649 aaKnown RBP15.71■□□□□ 0.11
C11orf54-214ENST00000540113 SPHKAPQ2M3C7 1700 aa15.7■□□□□ 0.1
C11orf54-214ENST00000540113 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
C11orf54-214ENST00000540113 VWDEQ8N2E2 1590 aa15.7■□□□□ 0.1
C11orf54-214ENST00000540113 TET3O43151 1660 aa15.7■□□□□ 0.1
C11orf54-214ENST00000540113 TRPM2O94759 1503 aa15.7■□□□□ 0.1
C11orf54-214ENST00000540113 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
C11orf54-214ENST00000540113 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
C11orf54-214ENST00000540113 RIMBP3CA6NJZ7 1639 aa15.69■□□□□ 0.1
C11orf54-214ENST00000540113 RIMBP3BA6NNM3 1639 aa15.69■□□□□ 0.1
C11orf54-214ENST00000540113 RIMBP3Q9UFD9 1639 aa15.69■□□□□ 0.1
C11orf54-214ENST00000540113 CEP152O94986 1710 aa15.68■□□□□ 0.1
C11orf54-214ENST00000540113 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
C11orf54-214ENST00000540113 PTPRTO14522 1441 aa15.67■□□□□ 0.1
C11orf54-214ENST00000540113 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
C11orf54-214ENST00000540113 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
C11orf54-214ENST00000540113 MADDQ8WXG6 1647 aa15.66■□□□□ 0.1
C11orf54-214ENST00000540113 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
C11orf54-214ENST00000540113 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
C11orf54-214ENST00000540113 COL17A1Q9UMD9 1497 aaPredicted RBP15.64■□□□□ 0.09
C11orf54-214ENST00000540113 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
C11orf54-214ENST00000540113 TESK2Q96S53 571 aa15.62■□□□□ 0.09
C11orf54-214ENST00000540113 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
C11orf54-214ENST00000540113 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
C11orf54-214ENST00000540113 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
C11orf54-214ENST00000540113 KIF3BO15066 747 aa15.61■□□□□ 0.09
C11orf54-214ENST00000540113 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
C11orf54-214ENST00000540113 CD109Q6YHK3 1445 aa15.61■□□□□ 0.09
C11orf54-214ENST00000540113 IQGAP1P46940 1657 aa15.61■□□□□ 0.09
C11orf54-214ENST00000540113 KANK1Q14678 1352 aa15.6■□□□□ 0.09
C11orf54-214ENST00000540113 ZNF518AQ6AHZ1 1483 aa15.6■□□□□ 0.09
C11orf54-214ENST00000540113 UGGT1Q9NYU2 1555 aa15.59■□□□□ 0.09
C11orf54-214ENST00000540113 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
C11orf54-214ENST00000540113 PPRC1Q5VV67 1664 aaKnown RBP15.59■□□□□ 0.09
C11orf54-214ENST00000540113 EFCAB6Q5THR3 1501 aa15.59■□□□□ 0.09
C11orf54-214ENST00000540113 CFAP74Q9C0B2 1584 aa15.59■□□□□ 0.09
C11orf54-214ENST00000540113 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.08
C11orf54-214ENST00000540113 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
C11orf54-214ENST00000540113 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
C11orf54-214ENST00000540113 SMG6Q86US8 1419 aaKnown RBP15.57■□□□□ 0.08
C11orf54-214ENST00000540113 FRMPD1Q5SYB0 1578 aa15.57■□□□□ 0.08
C11orf54-214ENST00000540113 CC2D1BQ5T0F9 858 aaKnown RBP15.57■□□□□ 0.08
C11orf54-214ENST00000540113 NEURL4Q96JN8 1562 aa15.56■□□□□ 0.08
C11orf54-214ENST00000540113 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
C11orf54-214ENST00000540113 PER1O15534 1290 aaPredicted RBP15.55■□□□□ 0.08
C11orf54-214ENST00000540113 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
C11orf54-214ENST00000540113 LMTK2Q8IWU2 1503 aa15.54■□□□□ 0.08
C11orf54-214ENST00000540113 RALBP1Q15311 655 aa15.54■□□□□ 0.08
C11orf54-214ENST00000540113 GLI2P10070 1586 aa15.54■□□□□ 0.08
C11orf54-214ENST00000540113 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms