RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
RAB40C-205ENST00000539661 ZMYM4Q5VZL5 1548 aa23.34■■□□□ 1.33
RAB40C-205ENST00000539661 DDRGK1Q96HY6 314 aa23.34■■□□□ 1.33
RAB40C-205ENST00000539661 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
RAB40C-205ENST00000539661 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.33
RAB40C-205ENST00000539661 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-205ENST00000539661 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-205ENST00000539661 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
RAB40C-205ENST00000539661 ADCY10Q96PN6 1610 aa23.31■■□□□ 1.32
RAB40C-205ENST00000539661 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-205ENST00000539661 PARD3Q8TEW0 1356 aa23.3■■□□□ 1.32
RAB40C-205ENST00000539661 IL27Q8NEV9 243 aa23.3■■□□□ 1.32
RAB40C-205ENST00000539661 KDM5DQ9BY66 1539 aa23.3■■□□□ 1.32
RAB40C-205ENST00000539661 CFDP1Q9UEE9 299 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-205ENST00000539661 LAS1LQ9Y4W2 734 aaKnown RBP23.29■■□□□ 1.32
RAB40C-205ENST00000539661 PRG4Q92954 1404 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-205ENST00000539661 ANO8Q9HCE9 1232 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-205ENST00000539661 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
RAB40C-205ENST00000539661 ANKRD50Q9ULJ7 1429 aa23.29■■□□□ 1.32
RAB40C-205ENST00000539661 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
RAB40C-205ENST00000539661 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
RAB40C-205ENST00000539661 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
RAB40C-205ENST00000539661 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
RAB40C-205ENST00000539661 PLEKHH2Q8IVE3 1493 aa23.23■■□□□ 1.31
RAB40C-205ENST00000539661 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-205ENST00000539661 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-205ENST00000539661 NUP155O75694 1391 aa23.2■■□□□ 1.3
RAB40C-205ENST00000539661 PTPRGP23470 1445 aa23.17■■□□□ 1.3
RAB40C-205ENST00000539661 TRPM1Q7Z4N2 1603 aa23.16■■□□□ 1.3
RAB40C-205ENST00000539661 GSE1Q14687 1217 aa23.15■■□□□ 1.3
RAB40C-205ENST00000539661 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.3
RAB40C-205ENST00000539661 CDCA7LQ96GN5 454 aa23.14■■□□□ 1.29
RAB40C-205ENST00000539661 CDC42BPAQ5VT25 1732 aa23.14■■□□□ 1.29
RAB40C-205ENST00000539661 CRBNQ96SW2 442 aa23.13■■□□□ 1.29
RAB40C-205ENST00000539661 LAMC1P11047 1609 aa23.13■■□□□ 1.29
RAB40C-205ENST00000539661 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
RAB40C-205ENST00000539661 C9orf84Q5VXU9 1444 aa23.12■■□□□ 1.29
RAB40C-205ENST00000539661 KDM2AQ9Y2K7 1162 aa23.11■■□□□ 1.29
RAB40C-205ENST00000539661 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
RAB40C-205ENST00000539661 NUP160Q12769 1436 aa23.1■■□□□ 1.29
RAB40C-205ENST00000539661 RTN4Q9NQC3 1192 aaKnown RBP23.1■■□□□ 1.29
RAB40C-205ENST00000539661 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
RAB40C-205ENST00000539661 COL17A1Q9UMD9 1497 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-205ENST00000539661 GPRASP1Q5JY77 1395 aa23.09■■□□□ 1.29
RAB40C-205ENST00000539661 NFKBIBQ15653 356 aa23.09■■□□□ 1.29
RAB40C-205ENST00000539661 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-205ENST00000539661 PLIN1O60240 522 aa23.08■■□□□ 1.28
RAB40C-205ENST00000539661 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-205ENST00000539661 PRDM15P57071 1507 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-205ENST00000539661 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
RAB40C-205ENST00000539661 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
RAB40C-205ENST00000539661 FAM161AQ3B820 660 aa23.03■■□□□ 1.28
RAB40C-205ENST00000539661 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
RAB40C-205ENST00000539661 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
RAB40C-205ENST00000539661 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
RAB40C-205ENST00000539661 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
RAB40C-205ENST00000539661 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
RAB40C-205ENST00000539661 EIF2AK4Q9P2K8 1649 aaKnown RBP22.99■■□□□ 1.27
RAB40C-205ENST00000539661 BRPF3Q9ULD4 1205 aa22.98■■□□□ 1.27
RAB40C-205ENST00000539661 ATP10BO94823 1461 aa22.98■■□□□ 1.27
RAB40C-205ENST00000539661 CCDC144AA2RUR9 1427 aa22.98■■□□□ 1.27
RAB40C-205ENST00000539661 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
RAB40C-205ENST00000539661 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
RAB40C-205ENST00000539661 FRAT1Q92837 279 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-205ENST00000539661 C8orf34Q49A92 452 aa22.96■■□□□ 1.27
RAB40C-205ENST00000539661 SKAP1Q86WV1 359 aa22.96■■□□□ 1.27
RAB40C-205ENST00000539661 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-205ENST00000539661 TESK2Q96S53 571 aa22.96■■□□□ 1.27
RAB40C-205ENST00000539661 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
RAB40C-205ENST00000539661 CC2D1BQ5T0F9 858 aaKnown RBP22.95■■□□□ 1.27
RAB40C-205ENST00000539661 C20orf194Q5TEA3 1177 aa22.95■■□□□ 1.27
RAB40C-205ENST00000539661 DISP3Q9P2K9 1392 aa22.95■■□□□ 1.26
RAB40C-205ENST00000539661 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
RAB40C-205ENST00000539661 PANK3Q9H999 370 aa22.94■■□□□ 1.26
RAB40C-205ENST00000539661 CHD1O14646 1710 aa22.93■■□□□ 1.26
RAB40C-205ENST00000539661 DUSP27Q5VZP5 1158 aa22.92■■□□□ 1.26
RAB40C-205ENST00000539661 A2MP01023 1474 aa22.92■■□□□ 1.26
RAB40C-205ENST00000539661 TMF1P82094 1093 aa22.91■■□□□ 1.26
RAB40C-205ENST00000539661 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
RAB40C-205ENST00000539661 ABCA8O94911 1581 aa22.91■■□□□ 1.26
RAB40C-205ENST00000539661 SLC4A3P48751 1232 aa22.91■■□□□ 1.26
RAB40C-205ENST00000539661 EIF3AQ14152 1382 aaKnown RBP22.9■■□□□ 1.26
RAB40C-205ENST00000539661 ZNF521Q96K83 1311 aa22.9■■□□□ 1.26
RAB40C-205ENST00000539661 UNC13BO14795 1591 aa22.89■■□□□ 1.26
RAB40C-205ENST00000539661 ADAMTS8Q9UP79 889 aa22.89■■□□□ 1.26
RAB40C-205ENST00000539661 CCDC141Q6ZP82 1450 aa22.89■■□□□ 1.25
RAB40C-205ENST00000539661 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
RAB40C-205ENST00000539661 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-205ENST00000539661 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
RAB40C-205ENST00000539661 PLEKHH1Q9ULM0 1364 aa22.87■■□□□ 1.25
RAB40C-205ENST00000539661 GOLGA2Q08379 1002 aa22.86■■□□□ 1.25
RAB40C-205ENST00000539661 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
RAB40C-205ENST00000539661 PLA2R1Q13018 1463 aa22.86■■□□□ 1.25
RAB40C-205ENST00000539661 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
RAB40C-205ENST00000539661 WDR43Q15061 677 aaKnown RBP eCLIP22.84■■□□□ 1.25
RAB40C-205ENST00000539661 FAM43AQ8N2R8 423 aa22.83■■□□□ 1.25
RAB40C-205ENST00000539661 FRAT2O75474 233 aaPredicted RBP22.82■■□□□ 1.24
RAB40C-205ENST00000539661 ATP10AO60312 1499 aa22.81■■□□□ 1.24
RAB40C-205ENST00000539661 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
RAB40C-205ENST00000539661 PPP2R1AP30153 589 aa22.81■■□□□ 1.24
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