RNA–Protein interactions for RNA: ENST00000537369.2

TRAV8-5-201, Transcript of T cell receptor alpha variable 8-5 (pseudogene), humanhuman

BASIC

Gene TRAV8-5, Length 341 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-5-201ENST00000537369 SHANK2Q9UPX8 1470 aa6.89□□□□□ -1.31
TRAV8-5-201ENST00000537369 ZNF142P52746 1687 aaPredicted RBP6.88□□□□□ -1.31
TRAV8-5-201ENST00000537369 ZC3H13Q5T200 1668 aaKnown RBP6.88□□□□□ -1.31
TRAV8-5-201ENST00000537369 CAMSAP1Q5T5Y3 1602 aa6.88□□□□□ -1.31
TRAV8-5-201ENST00000537369 PPARGC1BQ86YN6 1023 aaKnown RBP6.88□□□□□ -1.31
TRAV8-5-201ENST00000537369 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
TRAV8-5-201ENST00000537369 MYO3AQ8NEV4 1616 aa6.87□□□□□ -1.31
TRAV8-5-201ENST00000537369 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
TRAV8-5-201ENST00000537369 ADGRL2O95490 1459 aa6.87□□□□□ -1.31
TRAV8-5-201ENST00000537369 LMTK3Q96Q04 1460 aa6.87□□□□□ -1.31
TRAV8-5-201ENST00000537369 SPAG9O60271 1321 aaKnown RBP6.87□□□□□ -1.31
TRAV8-5-201ENST00000537369 PRDM15P57071 1507 aaPredicted RBP6.86□□□□□ -1.31
TRAV8-5-201ENST00000537369 MYO5BQ9ULV0 1848 aa6.86□□□□□ -1.31
TRAV8-5-201ENST00000537369 UNC13BO14795 1591 aa6.86□□□□□ -1.31
TRAV8-5-201ENST00000537369 DUOX2Q9NRD8 1548 aa6.85□□□□□ -1.31
TRAV8-5-201ENST00000537369 RRBP1Q9P2E9 1410 aaKnown RBP6.84□□□□□ -1.31
TRAV8-5-201ENST00000537369 DHX29Q7Z478 1369 aaKnown RBP6.84□□□□□ -1.31
TRAV8-5-201ENST00000537369 SETD1BQ9UPS6 1966 aaKnown RBP6.84□□□□□ -1.31
TRAV8-5-201ENST00000537369 ABCC3O15438 1527 aa6.84□□□□□ -1.31
TRAV8-5-201ENST00000537369 KDM5DQ9BY66 1539 aa6.84□□□□□ -1.31
TRAV8-5-201ENST00000537369 E9PCH4 1651 aa6.84□□□□□ -1.32
TRAV8-5-201ENST00000537369 MLECQ14165 292 aa6.83□□□□□ -1.32
TRAV8-5-201ENST00000537369 NCOA1Q15788 1441 aa6.83□□□□□ -1.32
TRAV8-5-201ENST00000537369 ARID4BQ4LE39 1312 aaPredicted RBP6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 FAM135AQ9P2D6 1515 aa6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 POLR1AO95602 1720 aaPredicted RBP6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 UBR1Q8IWV7 1749 aa6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 CEBPAP49715 358 aaPredicted RBP6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 RTN4Q9NQC3 1192 aaKnown RBP6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 IQGAP3Q86VI3 1631 aa6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 SYNMO15061 1565 aa6.82□□□□□ -1.32
TRAV8-5-201ENST00000537369 TET3O43151 1660 aa6.81□□□□□ -1.32
TRAV8-5-201ENST00000537369 ERBINQ96RT1 1412 aa6.81□□□□□ -1.32
TRAV8-5-201ENST00000537369 SPATA31D1Q6ZQQ2 1576 aa6.81□□□□□ -1.32
TRAV8-5-201ENST00000537369 KIF15Q9NS87 1388 aa6.81□□□□□ -1.32
TRAV8-5-201ENST00000537369 CEP170BQ9Y4F5 1589 aaPredicted RBP6.8□□□□□ -1.32
TRAV8-5-201ENST00000537369 EFCAB6Q5THR3 1501 aa6.8□□□□□ -1.32
TRAV8-5-201ENST00000537369 LMTK2Q8IWU2 1503 aa6.8□□□□□ -1.32
TRAV8-5-201ENST00000537369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAV8-5-201ENST00000537369 PIK3C2BO00750 1634 aa6.79□□□□□ -1.32
TRAV8-5-201ENST00000537369 PZPP20742 1482 aa6.79□□□□□ -1.32
TRAV8-5-201ENST00000537369 NEURL4Q96JN8 1562 aa6.79□□□□□ -1.32
TRAV8-5-201ENST00000537369 APLP2Q06481 763 aa6.79□□□□□ -1.32
TRAV8-5-201ENST00000537369 RSPH4AQ5TD94 716 aa6.79□□□□□ -1.32
TRAV8-5-201ENST00000537369 SPHKAPQ2M3C7 1700 aa6.79□□□□□ -1.32
TRAV8-5-201ENST00000537369 CNTLNQ9NXG0 1405 aa6.78□□□□□ -1.32
TRAV8-5-201ENST00000537369 STRCP1A6NGW2 1772 aa6.78□□□□□ -1.32
TRAV8-5-201ENST00000537369 SLC24A1O60721 1099 aa6.78□□□□□ -1.32
TRAV8-5-201ENST00000537369 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
TRAV8-5-201ENST00000537369 MYT1LQ9UL68 1186 aa6.78□□□□□ -1.32
TRAV8-5-201ENST00000537369 ZMYM3Q14202 1370 aa6.78□□□□□ -1.32
TRAV8-5-201ENST00000537369 KIF3BO15066 747 aa6.77□□□□□ -1.33
TRAV8-5-201ENST00000537369 RRP7BPQ9NSQ0 103 aa6.77□□□□□ -1.33
TRAV8-5-201ENST00000537369 RNF216Q9NWF9 866 aaPredicted RBP6.77□□□□□ -1.33
TRAV8-5-201ENST00000537369 ERVK-7P63135 1459 aa6.77□□□□□ -1.33
TRAV8-5-201ENST00000537369 KDM5AP29375 1690 aaKnown RBP6.77□□□□□ -1.33
TRAV8-5-201ENST00000537369 NAIPQ13075 1403 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 NPATQ14207 1427 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 FAM50AQ14320 339 aaKnown RBP6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 FBXO31Q5XUX0 539 aaPredicted RBP6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 GGT6Q6P531 493 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 ROCK1Q13464 1354 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 ANKRD30AQ9BXX3 1397 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 UGGT1Q9NYU2 1555 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 XIRP1Q702N8 1843 aaKnown RBP6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 ANKRD50Q9ULJ7 1429 aa6.76□□□□□ -1.33
TRAV8-5-201ENST00000537369 MSH5O43196 834 aa6.75□□□□□ -1.33
TRAV8-5-201ENST00000537369 TSPY4P0CV99 314 aa6.75□□□□□ -1.33
TRAV8-5-201ENST00000537369 TSPY10P0CW01 314 aa6.75□□□□□ -1.33
TRAV8-5-201ENST00000537369 HSPA2P54652 639 aa6.75□□□□□ -1.33
TRAV8-5-201ENST00000537369 ARHGAP31Q2M1Z3 1444 aa6.75□□□□□ -1.33
TRAV8-5-201ENST00000537369 TMEM131LA2VDJ0 1609 aa6.74□□□□□ -1.33
TRAV8-5-201ENST00000537369 CLTCL1P53675 1640 aa6.74□□□□□ -1.33
TRAV8-5-201ENST00000537369 A2ML1A8K2U0 1454 aa6.73□□□□□ -1.33
TRAV8-5-201ENST00000537369 NOS1P29475 1434 aa6.73□□□□□ -1.33
TRAV8-5-201ENST00000537369 UHRF1BP1Q6BDS2 1440 aa6.73□□□□□ -1.33
TRAV8-5-201ENST00000537369 IFT172Q9UG01 1749 aa6.73□□□□□ -1.33
TRAV8-5-201ENST00000537369 IQGAP1P46940 1657 aa6.72□□□□□ -1.33
TRAV8-5-201ENST00000537369 SLC4A2P04920 1241 aa6.72□□□□□ -1.33
TRAV8-5-201ENST00000537369 HFM1A2PYH4 1435 aa6.72□□□□□ -1.33
TRAV8-5-201ENST00000537369 LTBP4Q8N2S1 1624 aa6.72□□□□□ -1.33
TRAV8-5-201ENST00000537369 SETD1AO15047 1707 aaKnown RBP6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 ITGAEP38570 1179 aa6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 NRXN3Q9Y4C0 1643 aa6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 PLA2R1Q13018 1463 aa6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 ARHGAP23Q9P227 1491 aa6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 KIF1BO60333 1816 aa6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 ADGRB3O60242 1522 aa6.71□□□□□ -1.34
TRAV8-5-201ENST00000537369 TNRQ92752 1358 aa6.7□□□□□ -1.34
TRAV8-5-201ENST00000537369 PPLO60437 1756 aa6.7□□□□□ -1.34
TRAV8-5-201ENST00000537369 AMER1Q5JTC6 1135 aaPredicted RBP6.7□□□□□ -1.34
TRAV8-5-201ENST00000537369 NLRP1Q9C000 1473 aa6.7□□□□□ -1.34
TRAV8-5-201ENST00000537369 WASHC2CQ9Y4E1 1318 aa6.7□□□□□ -1.34
TRAV8-5-201ENST00000537369 SLIT1O75093 1534 aa6.7□□□□□ -1.34
TRAV8-5-201ENST00000537369 RPRD2Q5VT52 1461 aaKnown RBP6.69□□□□□ -1.34
TRAV8-5-201ENST00000537369 ALKQ9UM73 1620 aa6.68□□□□□ -1.34
TRAV8-5-201ENST00000537369 TRPM2O94759 1503 aa6.68□□□□□ -1.34
TRAV8-5-201ENST00000537369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRAV8-5-201ENST00000537369 CHD2O14647 1828 aaKnown RBP6.68□□□□□ -1.34
TRAV8-5-201ENST00000537369 PTPRTO14522 1441 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms