RNA–Protein interactions for RNA: ENST00000537369.2

TRAV8-5-201, Transcript of T cell receptor alpha variable 8-5 (pseudogene), humanhuman

BASIC

Gene TRAV8-5, Length 341 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-5-201ENST00000537369 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
TRAV8-5-201ENST00000537369 CHIC1Q5VXU3 224 aa9.96□□□□□ -0.82
TRAV8-5-201ENST00000537369 AEBP2Q6ZN18 517 aaPredicted RBP9.86□□□□□ -0.83
TRAV8-5-201ENST00000537369 CCDC180Q9P1Z9 1646 aa9.8□□□□□ -0.84
TRAV8-5-201ENST00000537369 ABCC9O60706 1549 aa9.49□□□□□ -0.89
TRAV8-5-201ENST00000537369 UNC13AQ9UPW8 1703 aa9.18□□□□□ -0.94
TRAV8-5-201ENST00000537369 ZCCHC6Q5VYS8 1495 aaKnown RBP9.14□□□□□ -0.95
TRAV8-5-201ENST00000537369 RB1CC1Q8TDY2 1594 aa9.12□□□□□ -0.95
TRAV8-5-201ENST00000537369 NACADO15069 1562 aa9.12□□□□□ -0.95
TRAV8-5-201ENST00000537369 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
TRAV8-5-201ENST00000537369 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
TRAV8-5-201ENST00000537369 BICRAQ9NZM4 1560 aa8.99□□□□□ -0.97
TRAV8-5-201ENST00000537369 DCAF8L2P0C7V8 631 aa8.92□□□□□ -0.98
TRAV8-5-201ENST00000537369 SCRIBQ14160 1630 aa8.91□□□□□ -0.98
TRAV8-5-201ENST00000537369 PHF23Q9BUL5 403 aaPredicted RBP8.87□□□□□ -0.99
TRAV8-5-201ENST00000537369 PABPN1Q86U42 306 aaKnown RBP eCLIP8.8□□□□□ -1
TRAV8-5-201ENST00000537369 DNAJC5BQ9UF47 199 aa8.75□□□□□ -1.01
TRAV8-5-201ENST00000537369 SHROOM4Q9ULL8 1493 aa8.72□□□□□ -1.01
TRAV8-5-201ENST00000537369 EIF4G1Q04637 1599 aaKnown RBP8.67□□□□□ -1.02
TRAV8-5-201ENST00000537369 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.03
TRAV8-5-201ENST00000537369 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
TRAV8-5-201ENST00000537369 SMARCA4P51532 1647 aa8.54□□□□□ -1.04
TRAV8-5-201ENST00000537369 MROH2BQ7Z745 1585 aa8.48□□□□□ -1.05
TRAV8-5-201ENST00000537369 PEG3Q9GZU2 1588 aa8.45□□□□□ -1.06
TRAV8-5-201ENST00000537369 BAZ1AQ9NRL2 1556 aaPredicted RBP8.45□□□□□ -1.06
TRAV8-5-201ENST00000537369 WIZO95785 1651 aa8.43□□□□□ -1.06
TRAV8-5-201ENST00000537369 ATAD2BQ9ULI0 1458 aa8.42□□□□□ -1.06
TRAV8-5-201ENST00000537369 HMGXB3Q12766 1538 aa8.4□□□□□ -1.06
TRAV8-5-201ENST00000537369 NCAPD3P42695 1498 aa8.39□□□□□ -1.07
TRAV8-5-201ENST00000537369 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
TRAV8-5-201ENST00000537369 BAZ1BQ9UIG0 1483 aaKnown RBP8.32□□□□□ -1.08
TRAV8-5-201ENST00000537369 RSF1Q96T23 1441 aaPredicted RBP8.31□□□□□ -1.08
TRAV8-5-201ENST00000537369 NESP48681 1621 aa8.28□□□□□ -1.08
TRAV8-5-201ENST00000537369 TOP2AP11388 1531 aaKnown RBP8.26□□□□□ -1.09
TRAV8-5-201ENST00000537369 KIF21AQ7Z4S6 1674 aa8.26□□□□□ -1.09
TRAV8-5-201ENST00000537369 PRDM2Q13029 1718 aa8.24□□□□□ -1.09
TRAV8-5-201ENST00000537369 PLPPR3Q6T4P5 718 aa8.22□□□□□ -1.09
TRAV8-5-201ENST00000537369 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.1
TRAV8-5-201ENST00000537369 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
TRAV8-5-201ENST00000537369 SENP3Q9H4L4 574 aaPredicted RBP8.17□□□□□ -1.1
TRAV8-5-201ENST00000537369 CCDC88BA6NC98 1476 aa8.14□□□□□ -1.11
TRAV8-5-201ENST00000537369 CFTRP13569 1480 aa8.11□□□□□ -1.11
TRAV8-5-201ENST00000537369 CADPSQ9ULU8 1353 aa8.1□□□□□ -1.11
TRAV8-5-201ENST00000537369 ERCC6Q03468 1493 aa8.08□□□□□ -1.12
TRAV8-5-201ENST00000537369 WDR62O43379 1518 aa8.07□□□□□ -1.12
TRAV8-5-201ENST00000537369 CUX2O14529 1486 aa8.05□□□□□ -1.12
TRAV8-5-201ENST00000537369 FANCD2Q9BXW9 1451 aa8.05□□□□□ -1.12
TRAV8-5-201ENST00000537369 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
TRAV8-5-201ENST00000537369 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
TRAV8-5-201ENST00000537369 MRC2Q9UBG0 1479 aa8.03□□□□□ -1.12
TRAV8-5-201ENST00000537369 CEP164Q9UPV0 1460 aa8.03□□□□□ -1.12
TRAV8-5-201ENST00000537369 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
TRAV8-5-201ENST00000537369 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
TRAV8-5-201ENST00000537369 WDR97A6NE52 1622 aa7.96□□□□□ -1.13
TRAV8-5-201ENST00000537369 TOPBP1Q92547 1522 aa7.96□□□□□ -1.14
TRAV8-5-201ENST00000537369 TARBP1Q13395 1621 aaKnown RBP7.96□□□□□ -1.14
TRAV8-5-201ENST00000537369 CUX1P39880 1505 aa7.94□□□□□ -1.14
TRAV8-5-201ENST00000537369 BIVM-ERCC5R4GMW8 1640 aa7.92□□□□□ -1.14
TRAV8-5-201ENST00000537369 SYNJ1O43426 1573 aa7.91□□□□□ -1.14
TRAV8-5-201ENST00000537369 EIF4G3O43432 1585 aaKnown RBP7.91□□□□□ -1.14
TRAV8-5-201ENST00000537369 ABCC8Q09428 1581 aa7.91□□□□□ -1.14
TRAV8-5-201ENST00000537369 ZNF608Q9ULD9 1512 aaPredicted RBP7.9□□□□□ -1.14
TRAV8-5-201ENST00000537369 POLA1P09884 1462 aaPredicted RBP7.89□□□□□ -1.15
TRAV8-5-201ENST00000537369 CHD1O14646 1710 aa7.87□□□□□ -1.15
TRAV8-5-201ENST00000537369 PBRM1Q86U86 1689 aa7.87□□□□□ -1.15
TRAV8-5-201ENST00000537369 TOP2BQ02880 1626 aa7.87□□□□□ -1.15
TRAV8-5-201ENST00000537369 FGD5Q6ZNL6 1462 aa7.87□□□□□ -1.15
TRAV8-5-201ENST00000537369 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
TRAV8-5-201ENST00000537369 IFT140Q96RY7 1462 aa7.85□□□□□ -1.15
TRAV8-5-201ENST00000537369 ABCA5Q8WWZ7 1642 aa7.85□□□□□ -1.15
TRAV8-5-201ENST00000537369 ADRA2BP18089 450 aa7.82□□□□□ -1.16
TRAV8-5-201ENST00000537369 AQRO60306 1485 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRAV8-5-201ENST00000537369 SOGA1O94964 1423 aa7.78□□□□□ -1.16
TRAV8-5-201ENST00000537369 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
TRAV8-5-201ENST00000537369 ABCA10Q8WWZ4 1543 aa7.78□□□□□ -1.16
TRAV8-5-201ENST00000537369 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
TRAV8-5-201ENST00000537369 TDRD9Q8NDG6 1382 aaKnown RBP7.75□□□□□ -1.17
TRAV8-5-201ENST00000537369 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
TRAV8-5-201ENST00000537369 ADAMTS12P58397 1594 aa7.74□□□□□ -1.17
TRAV8-5-201ENST00000537369 CLASP1Q7Z460 1538 aa7.73□□□□□ -1.17
TRAV8-5-201ENST00000537369 RIMBP3CA6NJZ7 1639 aa7.71□□□□□ -1.17
TRAV8-5-201ENST00000537369 RIMBP3BA6NNM3 1639 aa7.71□□□□□ -1.17
TRAV8-5-201ENST00000537369 RIMBP3Q9UFD9 1639 aa7.71□□□□□ -1.17
TRAV8-5-201ENST00000537369 GAPVD1Q14C86 1478 aa7.71□□□□□ -1.18
TRAV8-5-201ENST00000537369 PPP6R1Q9UPN7 881 aa7.71□□□□□ -1.18
TRAV8-5-201ENST00000537369 GRIN2BQ13224 1484 aa7.7□□□□□ -1.18
TRAV8-5-201ENST00000537369 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
TRAV8-5-201ENST00000537369 MAGI1Q96QZ7 1491 aaPredicted RBP7.69□□□□□ -1.18
TRAV8-5-201ENST00000537369 KCNA4P22459 653 aa7.69□□□□□ -1.18
TRAV8-5-201ENST00000537369 ERICH3Q5RHP9 1530 aa7.68□□□□□ -1.18
TRAV8-5-201ENST00000537369 SYNJ2O15056 1496 aa7.68□□□□□ -1.18
TRAV8-5-201ENST00000537369 RUSC2Q8N2Y8 1516 aa7.68□□□□□ -1.18
TRAV8-5-201ENST00000537369 SHROOM2Q13796 1616 aa7.67□□□□□ -1.18
TRAV8-5-201ENST00000537369 EHMT2Q96KQ7 1210 aa7.66□□□□□ -1.18
TRAV8-5-201ENST00000537369 ERCC6L2Q5T890 1561 aa7.66□□□□□ -1.18
TRAV8-5-201ENST00000537369 CUL7Q14999 1698 aa7.66□□□□□ -1.18
TRAV8-5-201ENST00000537369 GRIN2AQ12879 1464 aa7.65□□□□□ -1.18
TRAV8-5-201ENST00000537369 ARHGEF11O15085 1522 aa7.64□□□□□ -1.19
TRAV8-5-201ENST00000537369 NUP160Q12769 1436 aa7.62□□□□□ -1.19
TRAV8-5-201ENST00000537369 FOXD1Q16676 465 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms