RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 CTTNBP2Q8WZ74 1663 aa8.02□□□□□ -1.13
CHD4-206ENST00000536999 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
CHD4-206ENST00000536999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHD4-206ENST00000536999 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
CHD4-206ENST00000536999 RAPGEF6Q8TEU7 1601 aa8□□□□□ -1.13
CHD4-206ENST00000536999 AGLP35573 1532 aa7.99□□□□□ -1.13
CHD4-206ENST00000536999 SUPT6HQ7KZ85 1726 aaKnown RBP7.99□□□□□ -1.13
CHD4-206ENST00000536999 ALKQ9UM73 1620 aa7.99□□□□□ -1.13
CHD4-206ENST00000536999 ZNF518AQ6AHZ1 1483 aa7.99□□□□□ -1.13
CHD4-206ENST00000536999 TONSLQ96HA7 1378 aa7.98□□□□□ -1.13
CHD4-206ENST00000536999 CEP170BQ9Y4F5 1589 aaPredicted RBP7.98□□□□□ -1.13
CHD4-206ENST00000536999 EFCAB2Q5VUJ9 269 aa7.98□□□□□ -1.13
CHD4-206ENST00000536999 ZMYM3Q14202 1370 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 MYO3AQ8NEV4 1616 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
CHD4-206ENST00000536999 AFAP1Q8N556 730 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 TRIM52Q96A61 297 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 BCL11AQ9H165 835 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 NUP153P49790 1475 aaKnown RBP7.97□□□□□ -1.13
CHD4-206ENST00000536999 LRRC9Q6ZRR7 1453 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 ZNF142P52746 1687 aaPredicted RBP7.97□□□□□ -1.13
CHD4-206ENST00000536999 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 REREQ9P2R6 1566 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 DIP2CQ9Y2E4 1556 aa7.97□□□□□ -1.13
CHD4-206ENST00000536999 PLCH2O75038 1416 aa7.96□□□□□ -1.13
CHD4-206ENST00000536999 ARHGAP35Q9NRY4 1499 aa7.96□□□□□ -1.13
CHD4-206ENST00000536999 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
CHD4-206ENST00000536999 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
CHD4-206ENST00000536999 RNF17Q9BXT8 1623 aaKnown RBP7.94□□□□□ -1.14
CHD4-206ENST00000536999 CCDC18Q5T9S5 1454 aa7.94□□□□□ -1.14
CHD4-206ENST00000536999 FYCO1Q9BQS8 1478 aa7.94□□□□□ -1.14
CHD4-206ENST00000536999 KDM5CP41229 1560 aa7.93□□□□□ -1.14
CHD4-206ENST00000536999 MROH2AA6NES4 1674 aa7.93□□□□□ -1.14
CHD4-206ENST00000536999 VWDEQ8N2E2 1590 aa7.93□□□□□ -1.14
CHD4-206ENST00000536999 ABCA6Q8N139 1617 aa7.92□□□□□ -1.14
CHD4-206ENST00000536999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.92□□□□□ -1.149e-12■■□□□ 13.2
CHD4-206ENST00000536999 RNF39Q9H2S5 420 aa7.92□□□□□ -1.14
CHD4-206ENST00000536999 CASKIN1Q8WXD9 1431 aa7.92□□□□□ -1.14
CHD4-206ENST00000536999 A2ML1A8K2U0 1454 aa7.92□□□□□ -1.14
CHD4-206ENST00000536999 FAM50AQ14320 339 aaKnown RBP7.91□□□□□ -1.14
CHD4-206ENST00000536999 ANKLE2Q86XL3 938 aa7.91□□□□□ -1.14
CHD4-206ENST00000536999 MLH3Q9UHC1 1453 aa7.91□□□□□ -1.14
CHD4-206ENST00000536999 LRRC7Q96NW7 1537 aa7.91□□□□□ -1.14
CHD4-206ENST00000536999 NEURL4Q96JN8 1562 aa7.91□□□□□ -1.14
CHD4-206ENST00000536999 POLR1AO95602 1720 aaPredicted RBP7.91□□□□□ -1.14
CHD4-206ENST00000536999 HFM1A2PYH4 1435 aa7.9□□□□□ -1.14
CHD4-206ENST00000536999 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
CHD4-206ENST00000536999 MEX3CQ5U5Q3 659 aaKnown RBP7.9□□□□□ -1.14
CHD4-206ENST00000536999 ZNF772Q68DY9 489 aaPredicted RBP7.9□□□□□ -1.14
CHD4-206ENST00000536999 ZRANB1Q9UGI0 708 aa7.9□□□□□ -1.14
CHD4-206ENST00000536999 DNMT1P26358 1616 aaKnown RBP7.89□□□□□ -1.15
CHD4-206ENST00000536999 ARHGAP5Q13017 1502 aa7.89□□□□□ -1.15
CHD4-206ENST00000536999 NPHP4O75161 1426 aaPredicted RBP7.89□□□□□ -1.15
CHD4-206ENST00000536999 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
CHD4-206ENST00000536999 SYNMO15061 1565 aa7.88□□□□□ -1.15
CHD4-206ENST00000536999 RXRBP28702 533 aa7.88□□□□□ -1.15
CHD4-206ENST00000536999 ITGAEP38570 1179 aa7.88□□□□□ -1.15
CHD4-206ENST00000536999 USP35Q9P2H5 1018 aa7.88□□□□□ -1.15
CHD4-206ENST00000536999 MYO5CQ9NQX4 1742 aa7.88□□□□□ -1.15
CHD4-206ENST00000536999 CLTCQ00610 1675 aaKnown RBP7.88□□□□□ -1.15
CHD4-206ENST00000536999 FAM135BQ49AJ0 1406 aa7.87□□□□□ -1.15
CHD4-206ENST00000536999 ZBED9Q6R2W3 1325 aa7.87□□□□□ -1.15
CHD4-206ENST00000536999 SLC4A2P04920 1241 aa7.87□□□□□ -1.15
CHD4-206ENST00000536999 ANP32AP39687 249 aaKnown RBP7.87□□□□□ -1.15
CHD4-206ENST00000536999 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHD4-206ENST00000536999 RBM33Q96EV2 1170 aaKnown RBP7.87□□□□□ -1.15
CHD4-206ENST00000536999 SAMD9Q5K651 1589 aa7.87□□□□□ -1.15
CHD4-206ENST00000536999 KTN1Q86UP2 1357 aaKnown RBP7.86□□□□□ -1.15
CHD4-206ENST00000536999 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
CHD4-206ENST00000536999 GGT6Q6P531 493 aa7.86□□□□□ -1.15
CHD4-206ENST00000536999 MTUS2Q5JR59 1369 aa7.85□□□□□ -1.15
CHD4-206ENST00000536999 CDK13Q14004 1512 aaKnown RBP7.85□□□□□ -1.15
CHD4-206ENST00000536999 THEMISQ8N1K5 641 aaPredicted RBP7.85□□□□□ -1.15
CHD4-206ENST00000536999 FGD6Q6ZV73 1430 aa7.85□□□□□ -1.15
CHD4-206ENST00000536999 TNRQ92752 1358 aa7.84□□□□□ -1.15
CHD4-206ENST00000536999 JCADQ9P266 1359 aa7.84□□□□□ -1.15
CHD4-206ENST00000536999 MED14O60244 1454 aa7.84□□□□□ -1.15
CHD4-206ENST00000536999 BCANQ96GW7 911 aa7.84□□□□□ -1.15
CHD4-206ENST00000536999 ABCC1P33527 1531 aa7.83□□□□□ -1.16
CHD4-206ENST00000536999 IFFO2Q5TF58 517 aa7.83□□□□□ -1.16
CHD4-206ENST00000536999 SETBP1Q9Y6X0 1596 aa7.83□□□□□ -1.16
CHD4-206ENST00000536999 ROCK2O75116 1388 aaKnown RBP7.83□□□□□ -1.16
CHD4-206ENST00000536999 FAM135AQ9P2D6 1515 aa7.83□□□□□ -1.16
CHD4-206ENST00000536999 IQGAP1P46940 1657 aa7.83□□□□□ -1.16
CHD4-206ENST00000536999 CDK12Q9NYV4 1490 aaPredicted RBP7.82□□□□□ -1.16
CHD4-206ENST00000536999 STRCP1A6NGW2 1772 aa7.82□□□□□ -1.16
CHD4-206ENST00000536999 NUTM2BA6NNL0 878 aaPredicted RBP7.82□□□□□ -1.16
CHD4-206ENST00000536999 NUTM2EB1AL46 878 aaPredicted RBP7.82□□□□□ -1.16
CHD4-206ENST00000536999 NUTM2DQ5VT03 806 aaPredicted RBP7.82□□□□□ -1.16
CHD4-206ENST00000536999 NUTM2AQ8IVF1 878 aaPredicted RBP7.82□□□□□ -1.16
CHD4-206ENST00000536999 MIA2Q96PC5 1412 aa7.82□□□□□ -1.16
CHD4-206ENST00000536999 SIN3AQ96ST3 1273 aa7.82□□□□□ -1.16
CHD4-206ENST00000536999 ATP1B4Q9UN42 357 aaPredicted RBP7.82□□□□□ -1.16
CHD4-206ENST00000536999 DEPDC5O75140 1603 aa7.81□□□□□ -1.16
CHD4-206ENST00000536999 NOP58Q9Y2X3 529 aaKnown RBP7.81□□□□□ -1.16
CHD4-206ENST00000536999 ITSN2Q9NZM3 1697 aa7.81□□□□□ -1.16
CHD4-206ENST00000536999 ROBO1Q9Y6N7 1651 aa7.81□□□□□ -1.16
CHD4-206ENST00000536999 KIDINS220Q9ULH0 1771 aa7.81□□□□□ -1.16
CHD4-206ENST00000536999 KIF14Q15058 1648 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms