RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 MYT1Q01538 1121 aa25.77■■□□□ 1.72
COPS7A-204ENST00000534947 ERICH6BQ5W0A0 696 aa25.77■■□□□ 1.72
COPS7A-204ENST00000534947 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.72
COPS7A-204ENST00000534947 PLCH2O75038 1416 aa25.76■■□□□ 1.71
COPS7A-204ENST00000534947 ERBINQ96RT1 1412 aa25.76■■□□□ 1.71
COPS7A-204ENST00000534947 BCANQ96GW7 911 aa25.76■■□□□ 1.71
COPS7A-204ENST00000534947 CCDC144AA2RUR9 1427 aa25.76■■□□□ 1.71
COPS7A-204ENST00000534947 CARD11Q9BXL7 1154 aa25.75■■□□□ 1.71
COPS7A-204ENST00000534947 ATP10AO60312 1499 aa25.74■■□□□ 1.71
COPS7A-204ENST00000534947 TRPM1Q7Z4N2 1603 aa25.74■■□□□ 1.71
COPS7A-204ENST00000534947 LAMC1P11047 1609 aa25.73■■□□□ 1.71
COPS7A-204ENST00000534947 ARAP3Q8WWN8 1544 aa25.73■■□□□ 1.71
COPS7A-204ENST00000534947 KTN1Q86UP2 1357 aaKnown RBP25.71■■□□□ 1.71
COPS7A-204ENST00000534947 PRAG1Q86YV5 1406 aa25.71■■□□□ 1.71
COPS7A-204ENST00000534947 ABCC1P33527 1531 aa25.7■■□□□ 1.71
COPS7A-204ENST00000534947 DCAF11Q8TEB1 546 aa25.7■■□□□ 1.7
COPS7A-204ENST00000534947 E9PCH4 1651 aa25.69■■□□□ 1.7
COPS7A-204ENST00000534947 PLA2R1Q13018 1463 aa25.68■■□□□ 1.7
COPS7A-204ENST00000534947 FAM9BQ8IZU0 186 aa25.68■■□□□ 1.7
COPS7A-204ENST00000534947 GPRASP1Q5JY77 1395 aa25.67■■□□□ 1.7
COPS7A-204ENST00000534947 EIF2AK4Q9P2K8 1649 aaKnown RBP25.67■■□□□ 1.7
COPS7A-204ENST00000534947 EFCAB2Q5VUJ9 269 aa25.66■■□□□ 1.7
COPS7A-204ENST00000534947 A2MP01023 1474 aa25.62■■□□□ 1.69
COPS7A-204ENST00000534947 KDM2AQ9Y2K7 1162 aa25.62■■□□□ 1.69
COPS7A-204ENST00000534947 RTEL1-TNFRSF6BF6WH68 1400 aa25.62■■□□□ 1.69
COPS7A-204ENST00000534947 ST20-MTHFSA0A0A6YYL1 179 aa25.61■■□□□ 1.69
COPS7A-204ENST00000534947 PRDM15P57071 1507 aaPredicted RBP25.59■■□□□ 1.69
COPS7A-204ENST00000534947 RALBP1Q15311 655 aa25.55■■□□□ 1.68
COPS7A-204ENST00000534947 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
COPS7A-204ENST00000534947 BRD4O60885 1362 aaPredicted RBP25.54■■□□□ 1.68
COPS7A-204ENST00000534947 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
COPS7A-204ENST00000534947 TRAPPC8Q9Y2L5 1435 aa25.53■■□□□ 1.68
COPS7A-204ENST00000534947 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
COPS7A-204ENST00000534947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.53■■□□□ 1.68
COPS7A-204ENST00000534947 DEPDC5O75140 1603 aa25.52■■□□□ 1.68
COPS7A-204ENST00000534947 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
COPS7A-204ENST00000534947 COL17A1Q9UMD9 1497 aaPredicted RBP25.51■■□□□ 1.67
COPS7A-204ENST00000534947 ABCA9Q8IUA7 1624 aa25.5■■□□□ 1.67
COPS7A-204ENST00000534947 MYBBP1AQ9BQG0 1328 aaKnown RBP25.5■■□□□ 1.67
COPS7A-204ENST00000534947 PNISRQ8TF01 805 aaKnown RBP25.49■■□□□ 1.67
COPS7A-204ENST00000534947 PPP4R2Q9NY27 417 aa25.49■■□□□ 1.67
COPS7A-204ENST00000534947 WDR7Q9Y4E6 1490 aa25.49■■□□□ 1.67
COPS7A-204ENST00000534947 LRPPRCP42704 1394 aaKnown RBP25.48■■□□□ 1.67
COPS7A-204ENST00000534947 TRPM2O94759 1503 aa25.47■■□□□ 1.67
COPS7A-204ENST00000534947 STAC3Q96MF2 364 aa25.47■■□□□ 1.67
COPS7A-204ENST00000534947 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
COPS7A-204ENST00000534947 WASHC2CQ9Y4E1 1318 aa25.46■■□□□ 1.67
COPS7A-204ENST00000534947 TMC1Q8TDI8 760 aa25.46■■□□□ 1.67
COPS7A-204ENST00000534947 INO80Q9ULG1 1556 aaPredicted RBP25.45■■□□□ 1.67
COPS7A-204ENST00000534947 RGL3Q3MIN7 710 aa25.45■■□□□ 1.66
COPS7A-204ENST00000534947 CEP152O94986 1710 aa25.44■■□□□ 1.66
COPS7A-204ENST00000534947 TET3O43151 1660 aa25.44■■□□□ 1.66
COPS7A-204ENST00000534947 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
COPS7A-204ENST00000534947 PTPRTO14522 1441 aa25.43■■□□□ 1.66
COPS7A-204ENST00000534947 PARD3Q8TEW0 1356 aa25.43■■□□□ 1.66
COPS7A-204ENST00000534947 NEURL4Q96JN8 1562 aa25.42■■□□□ 1.66
COPS7A-204ENST00000534947 NBPF1Q3BBV0 1214 aa25.42■■□□□ 1.66
COPS7A-204ENST00000534947 NUDCQ9Y266 331 aa25.42■■□□□ 1.66
COPS7A-204ENST00000534947 VWDEQ8N2E2 1590 aa25.41■■□□□ 1.66
COPS7A-204ENST00000534947 ATP7AQ04656 1500 aa25.41■■□□□ 1.66
COPS7A-204ENST00000534947 MADDQ8WXG6 1647 aa25.4■■□□□ 1.66
COPS7A-204ENST00000534947 TESK2Q96S53 571 aa25.39■■□□□ 1.66
COPS7A-204ENST00000534947 IRX6P78412 446 aaPredicted RBP25.39■■□□□ 1.65
COPS7A-204ENST00000534947 RBM19Q9Y4C8 960 aaKnown RBP25.39■■□□□ 1.65
COPS7A-204ENST00000534947 RNF123Q5XPI4 1314 aa25.39■■□□□ 1.65
COPS7A-204ENST00000534947 FANCAO15360 1455 aa25.38■■□□□ 1.65
COPS7A-204ENST00000534947 ZMYM4Q5VZL5 1548 aa25.38■■□□□ 1.65
COPS7A-204ENST00000534947 INSRP06213 1382 aa25.37■■□□□ 1.65
COPS7A-204ENST00000534947 IQGAP1P46940 1657 aa25.37■■□□□ 1.65
COPS7A-204ENST00000534947 NLRP13Q86W25 1043 aa25.37■■□□□ 1.65
COPS7A-204ENST00000534947 PER1O15534 1290 aaPredicted RBP25.36■■□□□ 1.65
COPS7A-204ENST00000534947 TMF1P82094 1093 aa25.34■■□□□ 1.65
COPS7A-204ENST00000534947 KANK1Q14678 1352 aa25.34■■□□□ 1.65
COPS7A-204ENST00000534947 SCAPERQ9BY12 1400 aa25.33■■□□□ 1.65
COPS7A-204ENST00000534947 DISP3Q9P2K9 1392 aa25.33■■□□□ 1.65
COPS7A-204ENST00000534947 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.64
COPS7A-204ENST00000534947 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
COPS7A-204ENST00000534947 AFAP1Q8N556 730 aa25.32■■□□□ 1.64
COPS7A-204ENST00000534947 ADGRL1O94910 1474 aa25.3■■□□□ 1.64
COPS7A-204ENST00000534947 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
COPS7A-204ENST00000534947 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
COPS7A-204ENST00000534947 SCAF11Q99590 1463 aaKnown RBP25.25■■□□□ 1.63
COPS7A-204ENST00000534947 ASXL2Q76L83 1435 aa25.24■■□□□ 1.63
COPS7A-204ENST00000534947 PDE3BQ13370 1112 aa25.23■■□□□ 1.63
COPS7A-204ENST00000534947 CDCA8Q53HL2 280 aa25.22■■□□□ 1.63
COPS7A-204ENST00000534947 SYNMO15061 1565 aa25.21■■□□□ 1.63
COPS7A-204ENST00000534947 CFAP74Q9C0B2 1584 aa25.21■■□□□ 1.63
COPS7A-204ENST00000534947 LMTK2Q8IWU2 1503 aa25.2■■□□□ 1.63
COPS7A-204ENST00000534947 MYOM2P54296 1465 aa25.2■■□□□ 1.63
COPS7A-204ENST00000534947 KIDINS220Q9ULH0 1771 aa25.2■■□□□ 1.62
COPS7A-204ENST00000534947 EFCAB6Q5THR3 1501 aa25.2■■□□□ 1.62
COPS7A-204ENST00000534947 PANK3Q9H999 370 aa25.2■■□□□ 1.62
COPS7A-204ENST00000534947 ZNF518AQ6AHZ1 1483 aa25.19■■□□□ 1.62
COPS7A-204ENST00000534947 EIF3AQ14152 1382 aaKnown RBP25.19■■□□□ 1.62
COPS7A-204ENST00000534947 FANCIQ9NVI1 1328 aa25.18■■□□□ 1.62
COPS7A-204ENST00000534947 KIF1BO60333 1816 aa25.18■■□□□ 1.62
COPS7A-204ENST00000534947 BLMP54132 1417 aaPredicted RBP25.18■■□□□ 1.62
COPS7A-204ENST00000534947 SLC24A1O60721 1099 aa25.17■■□□□ 1.62
COPS7A-204ENST00000534947 ANP32EQ9BTT0 268 aa25.17■■□□□ 1.62
COPS7A-204ENST00000534947 MAP3K4Q9Y6R4 1608 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms