RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PLEKHD1A6NEE1 506 aa22.37■■□□□ 1.17
CTSB-228ENST00000533455 JPH4Q96JJ6 628 aa22.35■■□□□ 1.17
CTSB-228ENST00000533455 ST20-MTHFSA0A0A6YYL1 179 aa22.35■■□□□ 1.17
CTSB-228ENST00000533455 CNGB1Q14028 1251 aaPredicted RBP22.35■■□□□ 1.17
CTSB-228ENST00000533455 LAMC1P11047 1609 aa22.34■■□□□ 1.17
CTSB-228ENST00000533455 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
CTSB-228ENST00000533455 TSPY4P0CV99 314 aa22.33■■□□□ 1.16
CTSB-228ENST00000533455 TSPY10P0CW01 314 aa22.33■■□□□ 1.16
CTSB-228ENST00000533455 PREX2Q70Z35 1606 aa22.32■■□□□ 1.16
CTSB-228ENST00000533455 SAMD9LQ8IVG5 1584 aa22.31■■□□□ 1.16
CTSB-228ENST00000533455 CCDC141Q6ZP82 1450 aa22.31■■□□□ 1.16
CTSB-228ENST00000533455 CDC42BPBQ9Y5S2 1711 aa22.31■■□□□ 1.16
CTSB-228ENST00000533455 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
CTSB-228ENST00000533455 PRAG1Q86YV5 1406 aa22.3■■□□□ 1.16
CTSB-228ENST00000533455 UNC13BO14795 1591 aa22.3■■□□□ 1.16
CTSB-228ENST00000533455 DCAF11Q8TEB1 546 aa22.29■■□□□ 1.16
CTSB-228ENST00000533455 FBLN2P98095 1184 aa22.28■■□□□ 1.16
CTSB-228ENST00000533455 MAST1Q9Y2H9 1570 aa22.28■■□□□ 1.16
CTSB-228ENST00000533455 ZMYM4Q5VZL5 1548 aa22.27■■□□□ 1.16
CTSB-228ENST00000533455 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
CTSB-228ENST00000533455 KDM2AQ9Y2K7 1162 aa22.27■■□□□ 1.16
CTSB-228ENST00000533455 GPRASP1Q5JY77 1395 aa22.27■■□□□ 1.16
CTSB-228ENST00000533455 INSRP06213 1382 aa22.26■■□□□ 1.15
CTSB-228ENST00000533455 ANP32AP39687 249 aaKnown RBP22.26■■□□□ 1.15
CTSB-228ENST00000533455 NLRP13Q86W25 1043 aa22.26■■□□□ 1.15
CTSB-228ENST00000533455 PDE3BQ13370 1112 aa22.25■■□□□ 1.15
CTSB-228ENST00000533455 IPO9Q96P70 1041 aaKnown RBP22.25■■□□□ 1.15
CTSB-228ENST00000533455 PRDM15P57071 1507 aaPredicted RBP22.25■■□□□ 1.15
CTSB-228ENST00000533455 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
CTSB-228ENST00000533455 COL17A1Q9UMD9 1497 aaPredicted RBP22.24■■□□□ 1.15
CTSB-228ENST00000533455 CCDC144AA2RUR9 1427 aa22.23■■□□□ 1.15
CTSB-228ENST00000533455 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
CTSB-228ENST00000533455 HNRNPMP52272 730 aaKnown RBP eCLIP22.23■■□□□ 1.15
CTSB-228ENST00000533455 EIF2AK4Q9P2K8 1649 aaKnown RBP22.23■■□□□ 1.15
CTSB-228ENST00000533455 RSPH4AQ5TD94 716 aa22.21■■□□□ 1.15
CTSB-228ENST00000533455 IQGAP3Q86VI3 1631 aa22.21■■□□□ 1.15
CTSB-228ENST00000533455 DEKP35659 375 aaKnown RBP22.2■■□□□ 1.14
CTSB-228ENST00000533455 RCAN3Q9UKA8 241 aa22.2■■□□□ 1.14
CTSB-228ENST00000533455 A2MP01023 1474 aa22.2■■□□□ 1.14
CTSB-228ENST00000533455 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
CTSB-228ENST00000533455 PLXNC1O60486 1568 aa22.19■■□□□ 1.14
CTSB-228ENST00000533455 PLA2R1Q13018 1463 aa22.19■■□□□ 1.14
CTSB-228ENST00000533455 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
CTSB-228ENST00000533455 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
CTSB-228ENST00000533455 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
CTSB-228ENST00000533455 TCERG1O14776 1098 aaKnown RBP22.16■■□□□ 1.14
CTSB-228ENST00000533455 EXOC6Q8TAG9 804 aa22.16■■□□□ 1.14
CTSB-228ENST00000533455 SYCP2Q9BX26 1530 aa22.16■■□□□ 1.14
CTSB-228ENST00000533455 RNF17Q9BXT8 1623 aaKnown RBP22.15■■□□□ 1.14
CTSB-228ENST00000533455 PLEKHH2Q8IVE3 1493 aa22.15■■□□□ 1.14
CTSB-228ENST00000533455 ZBTB47Q9UFB7 747 aaPredicted RBP22.13■■□□□ 1.13
CTSB-228ENST00000533455 ATP10AO60312 1499 aa22.13■■□□□ 1.13
CTSB-228ENST00000533455 MAGI2Q86UL8 1455 aa22.12■■□□□ 1.13
CTSB-228ENST00000533455 TESK2Q96S53 571 aa22.11■■□□□ 1.13
CTSB-228ENST00000533455 TTC37Q6PGP7 1564 aa22.11■■□□□ 1.13
CTSB-228ENST00000533455 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
CTSB-228ENST00000533455 ERBINQ96RT1 1412 aa22.11■■□□□ 1.13
CTSB-228ENST00000533455 DISP3Q9P2K9 1392 aa22.1■■□□□ 1.13
CTSB-228ENST00000533455 MS4A1P11836 297 aa22.09■■□□□ 1.13
CTSB-228ENST00000533455 NBR1Q14596 966 aa22.09■■□□□ 1.13
CTSB-228ENST00000533455 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.12
CTSB-228ENST00000533455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.125e-6■□□□□ 9.5
CTSB-228ENST00000533455 DUOX2Q9NRD8 1548 aa22.07■■□□□ 1.12
CTSB-228ENST00000533455 PDE4AP27815 886 aa22.03■■□□□ 1.12
CTSB-228ENST00000533455 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
CTSB-228ENST00000533455 CDCA7LQ96GN5 454 aa22.03■■□□□ 1.12
CTSB-228ENST00000533455 BACH2Q9BYV9 841 aa22.02■■□□□ 1.12
CTSB-228ENST00000533455 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
CTSB-228ENST00000533455 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
CTSB-228ENST00000533455 TMF1P82094 1093 aa22.01■■□□□ 1.11
CTSB-228ENST00000533455 PANK3Q9H999 370 aa22.01■■□□□ 1.11
CTSB-228ENST00000533455 SHROOM2Q13796 1616 aa22■■□□□ 1.11
CTSB-228ENST00000533455 RTL5Q5HYW3 569 aaPredicted RBP22■■□□□ 1.11
CTSB-228ENST00000533455 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
CTSB-228ENST00000533455 MADDQ8WXG6 1647 aa21.99■■□□□ 1.11
CTSB-228ENST00000533455 WDR7Q9Y4E6 1490 aa21.97■■□□□ 1.11
CTSB-228ENST00000533455 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
CTSB-228ENST00000533455 SYNMO15061 1565 aa21.96■■□□□ 1.11
CTSB-228ENST00000533455 SPHKAPQ2M3C7 1700 aa21.95■■□□□ 1.1
CTSB-228ENST00000533455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.1
CTSB-228ENST00000533455 CHD1O14646 1710 aa21.94■■□□□ 1.1
CTSB-228ENST00000533455 ABCC2Q92887 1545 aa21.94■■□□□ 1.1
CTSB-228ENST00000533455 CRBNQ96SW2 442 aa21.94■■□□□ 1.1
CTSB-228ENST00000533455 CEP152O94986 1710 aa21.93■■□□□ 1.1
CTSB-228ENST00000533455 NPM2Q86SE8 214 aaKnown RBP21.92■■□□□ 1.1
CTSB-228ENST00000533455 PLIN1O60240 522 aa21.91■■□□□ 1.1
CTSB-228ENST00000533455 TRPM2O94759 1503 aa21.9■■□□□ 1.1
CTSB-228ENST00000533455 ABCC1P33527 1531 aa21.89■■□□□ 1.1
CTSB-228ENST00000533455 MYOM1P52179 1685 aa21.89■■□□□ 1.09
CTSB-228ENST00000533455 USP35Q9P2H5 1018 aa21.88■■□□□ 1.09
CTSB-228ENST00000533455 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
CTSB-228ENST00000533455 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
CTSB-228ENST00000533455 KDM2BQ8NHM5 1336 aa21.87■■□□□ 1.09
CTSB-228ENST00000533455 PLCH2O75038 1416 aa21.87■■□□□ 1.09
CTSB-228ENST00000533455 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
CTSB-228ENST00000533455 PPP2R1AP30153 589 aa21.86■■□□□ 1.09
CTSB-228ENST00000533455 ZNF521Q96K83 1311 aa21.86■■□□□ 1.09
CTSB-228ENST00000533455 PLEKHH1Q9ULM0 1364 aa21.86■■□□□ 1.09
CTSB-228ENST00000533455 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
CTSB-228ENST00000533455 SCAF11Q99590 1463 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms