RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 FAM135AQ9P2D6 1515 aa29.03■■■□□ 2.24
LMNB2-205ENST00000532465 STRCQ7RTU9 1775 aa29.03■■■□□ 2.24
LMNB2-205ENST00000532465 RNF17Q9BXT8 1623 aaKnown RBP29.02■■■□□ 2.24
LMNB2-205ENST00000532465 WASHC2CQ9Y4E1 1318 aa29.02■■■□□ 2.24
LMNB2-205ENST00000532465 ILDR1Q86SU0 546 aaPredicted RBP29.02■■■□□ 2.24
LMNB2-205ENST00000532465 EIF2AK4Q9P2K8 1649 aaKnown RBP29.02■■■□□ 2.24
LMNB2-205ENST00000532465 DUOX2Q9NRD8 1548 aa29.01■■■□□ 2.23
LMNB2-205ENST00000532465 MYO3AQ8NEV4 1616 aa29.01■■■□□ 2.23
LMNB2-205ENST00000532465 KIF15Q9NS87 1388 aa29.01■■■□□ 2.23
LMNB2-205ENST00000532465 RRP7BPQ9NSQ0 103 aa28.99■■■□□ 2.23
LMNB2-205ENST00000532465 MROH1Q8NDA8 1641 aa28.96■■■□□ 2.23
LMNB2-205ENST00000532465 FBXO31Q5XUX0 539 aaPredicted RBP28.96■■■□□ 2.23
LMNB2-205ENST00000532465 CHIC2Q9UKJ5 165 aa28.96■■■□□ 2.23
LMNB2-205ENST00000532465 PZPP20742 1482 aa28.96■■■□□ 2.23
LMNB2-205ENST00000532465 FAM50AQ14320 339 aaKnown RBP28.95■■■□□ 2.22
LMNB2-205ENST00000532465 ZNF142P52746 1687 aaPredicted RBP28.95■■■□□ 2.22
LMNB2-205ENST00000532465 CEP170BQ9Y4F5 1589 aaPredicted RBP28.94■■■□□ 2.22
LMNB2-205ENST00000532465 NCOA1Q15788 1441 aa28.94■■■□□ 2.22
LMNB2-205ENST00000532465 CAMSAP1Q5T5Y3 1602 aa28.93■■■□□ 2.22
LMNB2-205ENST00000532465 ABCC3O15438 1527 aa28.93■■■□□ 2.22
LMNB2-205ENST00000532465 ERBINQ96RT1 1412 aa28.93■■■□□ 2.22
LMNB2-205ENST00000532465 DMRT2Q9Y5R5 561 aa28.91■■■□□ 2.22
LMNB2-205ENST00000532465 TNRQ92752 1358 aa28.9■■■□□ 2.22
LMNB2-205ENST00000532465 ANKRD30AQ9BXX3 1397 aa28.9■■■□□ 2.22
LMNB2-205ENST00000532465 ZC3H13Q5T200 1668 aaKnown RBP28.9■■■□□ 2.22
LMNB2-205ENST00000532465 PPARGC1BQ86YN6 1023 aaKnown RBP28.9■■■□□ 2.22
LMNB2-205ENST00000532465 CEP152O94986 1710 aa28.86■■■□□ 2.21
LMNB2-205ENST00000532465 A2ML1A8K2U0 1454 aa28.86■■■□□ 2.21
LMNB2-205ENST00000532465 PTPRTO14522 1441 aa28.86■■■□□ 2.21
LMNB2-205ENST00000532465 ADGRL2O95490 1459 aa28.85■■■□□ 2.21
LMNB2-205ENST00000532465 PRDM15P57071 1507 aaPredicted RBP28.84■■■□□ 2.21
LMNB2-205ENST00000532465 NCKAP5LQ9HCH0 1330 aa28.82■■■□□ 2.2
LMNB2-205ENST00000532465 PLA2R1Q13018 1463 aa28.82■■■□□ 2.2
LMNB2-205ENST00000532465 DEPDC5O75140 1603 aa28.81■■■□□ 2.2
LMNB2-205ENST00000532465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.81■■■□□ 2.2
LMNB2-205ENST00000532465 FBXO41Q8TF61 875 aa28.8■■■□□ 2.2
LMNB2-205ENST00000532465 SPATA31D1Q6ZQQ2 1576 aa28.78■■■□□ 2.2
LMNB2-205ENST00000532465 ERVK-7P63135 1459 aa28.78■■■□□ 2.2
LMNB2-205ENST00000532465 CERKQ8TCT0 537 aa28.77■■■□□ 2.2
LMNB2-205ENST00000532465 NLRP1Q9C000 1473 aa28.76■■■□□ 2.19
LMNB2-205ENST00000532465 PKD2Q13563 968 aa28.74■■■□□ 2.19
LMNB2-205ENST00000532465 KANK1Q14678 1352 aa28.74■■■□□ 2.19
LMNB2-205ENST00000532465 CFAP65Q6ZU64 1925 aaKnown RBP28.73■■■□□ 2.19
LMNB2-205ENST00000532465 ARHGAP31Q2M1Z3 1444 aa28.71■■■□□ 2.19
LMNB2-205ENST00000532465 ANKRD50Q9ULJ7 1429 aa28.71■■■□□ 2.19
LMNB2-205ENST00000532465 VWDEQ8N2E2 1590 aa28.71■■■□□ 2.19
LMNB2-205ENST00000532465 UGGT1Q9NYU2 1555 aa28.71■■■□□ 2.19
LMNB2-205ENST00000532465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.181e-6■□□□□ 8.8
LMNB2-205ENST00000532465 LMTK2Q8IWU2 1503 aa28.67■■■□□ 2.18
LMNB2-205ENST00000532465 ITGAEP38570 1179 aa28.66■■■□□ 2.18
LMNB2-205ENST00000532465 THEMISQ8N1K5 641 aaPredicted RBP28.66■■■□□ 2.18
LMNB2-205ENST00000532465 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
LMNB2-205ENST00000532465 POLR1AO95602 1720 aaPredicted RBP28.64■■■□□ 2.18
LMNB2-205ENST00000532465 ROCK1Q13464 1354 aa28.63■■■□□ 2.17
LMNB2-205ENST00000532465 NEURL4Q96JN8 1562 aa28.63■■■□□ 2.17
LMNB2-205ENST00000532465 ZNF335Q9H4Z2 1342 aaPredicted RBP28.61■■■□□ 2.17
LMNB2-205ENST00000532465 EFCAB6Q5THR3 1501 aa28.59■■■□□ 2.17
LMNB2-205ENST00000532465 ANKLE2Q86XL3 938 aa28.59■■■□□ 2.17
LMNB2-205ENST00000532465 RRBP1Q9P2E9 1410 aaKnown RBP28.57■■■□□ 2.16
LMNB2-205ENST00000532465 UBR1Q8IWV7 1749 aa28.57■■■□□ 2.16
LMNB2-205ENST00000532465 UNC13BO14795 1591 aa28.55■■■□□ 2.16
LMNB2-205ENST00000532465 SYNMO15061 1565 aa28.52■■■□□ 2.16
LMNB2-205ENST00000532465 MED14O60244 1454 aa28.52■■■□□ 2.16
LMNB2-205ENST00000532465 NPHP4O75161 1426 aaPredicted RBP28.52■■■□□ 2.16
LMNB2-205ENST00000532465 NOS1P29475 1434 aa28.52■■■□□ 2.16
LMNB2-205ENST00000532465 PIK3C2BO00750 1634 aa28.51■■■□□ 2.15
LMNB2-205ENST00000532465 TET3O43151 1660 aa28.5■■■□□ 2.15
LMNB2-205ENST00000532465 IDI1Q13907 227 aa28.48■■■□□ 2.15
LMNB2-205ENST00000532465 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
LMNB2-205ENST00000532465 IQGAP1P46940 1657 aa28.46■■■□□ 2.15
LMNB2-205ENST00000532465 IQSEC2Q5JU85 1478 aa28.46■■■□□ 2.15
LMNB2-205ENST00000532465 ARHGAP23Q9P227 1491 aa28.46■■■□□ 2.15
LMNB2-205ENST00000532465 SLIT1O75093 1534 aa28.45■■■□□ 2.15
LMNB2-205ENST00000532465 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.14
LMNB2-205ENST00000532465 STAG3Q9UJ98 1225 aa28.44■■■□□ 2.14
LMNB2-205ENST00000532465 SCAF11Q99590 1463 aaKnown RBP28.43■■■□□ 2.14
LMNB2-205ENST00000532465 IQGAP3Q86VI3 1631 aa28.43■■■□□ 2.14
LMNB2-205ENST00000532465 LTKP29376 864 aa28.42■■■□□ 2.14
LMNB2-205ENST00000532465 NUP155O75694 1391 aa28.41■■■□□ 2.14
LMNB2-205ENST00000532465 TXNDC2Q86VQ3 553 aa28.41■■■□□ 2.14
LMNB2-205ENST00000532465 TMEM2Q9UHN6 1383 aa28.39■■■□□ 2.14
LMNB2-205ENST00000532465 E9PCH4 1651 aa28.39■■■□□ 2.14
LMNB2-205ENST00000532465 KDM5AP29375 1690 aaKnown RBP28.39■■■□□ 2.14
LMNB2-205ENST00000532465 SLC52A1Q9NWF4 448 aa28.39■■■□□ 2.14
LMNB2-205ENST00000532465 ADGRB3O60242 1522 aa28.38■■■□□ 2.13
LMNB2-205ENST00000532465 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
LMNB2-205ENST00000532465 CPS1P31327 1500 aa28.36■■■□□ 2.13
LMNB2-205ENST00000532465 NAIPQ13075 1403 aa28.35■■■□□ 2.13
LMNB2-205ENST00000532465 STRCP1A6NGW2 1772 aa28.29■■■□□ 2.12
LMNB2-205ENST00000532465 UBAP1LF5GYI3 381 aa28.28■■■□□ 2.12
LMNB2-205ENST00000532465 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
LMNB2-205ENST00000532465 HFM1A2PYH4 1435 aa28.26■■■□□ 2.12
LMNB2-205ENST00000532465 TMEM131LA2VDJ0 1609 aa28.26■■■□□ 2.11
LMNB2-205ENST00000532465 CHGAP10645 457 aaKnown RBP28.23■■■□□ 2.11
LMNB2-205ENST00000532465 ZFYVE9O95405 1425 aa28.22■■■□□ 2.11
LMNB2-205ENST00000532465 RIMS2Q9UQ26 1411 aa28.2■■■□□ 2.11
LMNB2-205ENST00000532465 LRRC7Q96NW7 1537 aa28.2■■■□□ 2.1
LMNB2-205ENST00000532465 SLC26A8Q96RN1 970 aa28.18■■■□□ 2.1
LMNB2-205ENST00000532465 SPHKAPQ2M3C7 1700 aa28.18■■■□□ 2.1
LMNB2-205ENST00000532465 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms