RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CASKIN1Q8WXD9 1431 aa14.4□□□□□ -0.1
PTPRK-221ENST00000532331 RGS3P49796 1198 aa14.4□□□□□ -0.1
PTPRK-221ENST00000532331 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
PTPRK-221ENST00000532331 FGD1P98174 961 aa14.4□□□□□ -0.1
PTPRK-221ENST00000532331 RAPGEF3O95398 923 aa14.4□□□□□ -0.1
PTPRK-221ENST00000532331 ZRSR1Q15695 479 aaKnown RBP14.4□□□□□ -0.1
PTPRK-221ENST00000532331 DHX57Q6P158 1386 aaKnown RBP14.4□□□□□ -0.1
PTPRK-221ENST00000532331 TAF7LQ5H9L4 462 aa14.39□□□□□ -0.11
PTPRK-221ENST00000532331 ISY1Q9ULR0 285 aaKnown RBP14.38□□□□□ -0.11
PTPRK-221ENST00000532331 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
PTPRK-221ENST00000532331 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
PTPRK-221ENST00000532331 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
PTPRK-221ENST00000532331 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-221ENST00000532331 FYCO1Q9BQS8 1478 aa14.37□□□□□ -0.11
PTPRK-221ENST00000532331 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
PTPRK-221ENST00000532331 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
PTPRK-221ENST00000532331 CGNL1Q0VF96 1302 aa14.37□□□□□ -0.11
PTPRK-221ENST00000532331 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
PTPRK-221ENST00000532331 ANKLE2Q86XL3 938 aa14.36□□□□□ -0.11
PTPRK-221ENST00000532331 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
PTPRK-221ENST00000532331 ANKRD50Q9ULJ7 1429 aa14.36□□□□□ -0.11
PTPRK-221ENST00000532331 SYTL4Q96C24 671 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-221ENST00000532331 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
PTPRK-221ENST00000532331 KIAA0586Q9BVV6 1533 aa14.35□□□□□ -0.11
PTPRK-221ENST00000532331 ST20-MTHFSA0A0A6YYL1 179 aa14.35□□□□□ -0.11
PTPRK-221ENST00000532331 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
PTPRK-221ENST00000532331 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
PTPRK-221ENST00000532331 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-221ENST00000532331 NCOA2Q15596 1464 aa14.34□□□□□ -0.11
PTPRK-221ENST00000532331 NAP1L2Q9ULW6 460 aaPredicted RBP14.34□□□□□ -0.11
PTPRK-221ENST00000532331 GORABQ5T7V8 394 aa14.33□□□□□ -0.12
PTPRK-221ENST00000532331 TTC5Q8N0Z6 440 aa14.32□□□□□ -0.12
PTPRK-221ENST00000532331 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
PTPRK-221ENST00000532331 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
PTPRK-221ENST00000532331 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-221ENST00000532331 TEFQ10587 303 aa14.32□□□□□ -0.12
PTPRK-221ENST00000532331 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
PTPRK-221ENST00000532331 ESCO1Q5FWF5 840 aa14.31□□□□□ -0.12
PTPRK-221ENST00000532331 GLIPR1L2Q4G1C9 344 aa14.31□□□□□ -0.12
PTPRK-221ENST00000532331 CENPJQ9HC77 1338 aaPredicted RBP14.31□□□□□ -0.12
PTPRK-221ENST00000532331 CD109Q6YHK3 1445 aa14.31□□□□□ -0.12
PTPRK-221ENST00000532331 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
PTPRK-221ENST00000532331 PANK3Q9H999 370 aa14.3□□□□□ -0.12
PTPRK-221ENST00000532331 LRRC9Q6ZRR7 1453 aa14.3□□□□□ -0.12
PTPRK-221ENST00000532331 TROQ12816 1431 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-221ENST00000532331 PIP4K2BP78356 416 aa14.3□□□□□ -0.12
PTPRK-221ENST00000532331 KIF21BO75037 1637 aa14.29□□□□□ -0.12
PTPRK-221ENST00000532331 PTMAP06454 111 aaKnown RBP14.29□□□□□ -0.12
PTPRK-221ENST00000532331 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
PTPRK-221ENST00000532331 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
PTPRK-221ENST00000532331 B4GALNT3Q6L9W6 998 aa14.29□□□□□ -0.12
PTPRK-221ENST00000532331 APBB1O00213 710 aa14.28□□□□□ -0.12
PTPRK-221ENST00000532331 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
PTPRK-221ENST00000532331 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
PTPRK-221ENST00000532331 KLHL34Q8N239 644 aa14.27□□□□□ -0.12
PTPRK-221ENST00000532331 HECW1Q76N89 1606 aa14.27□□□□□ -0.12
PTPRK-221ENST00000532331 FRAT2O75474 233 aaPredicted RBP14.27□□□□□ -0.13
PTPRK-221ENST00000532331 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
PTPRK-221ENST00000532331 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.13
PTPRK-221ENST00000532331 SLC52A1Q9NWF4 448 aa14.27□□□□□ -0.13
PTPRK-221ENST00000532331 NLRP2Q9NX02 1062 aa14.27□□□□□ -0.13
PTPRK-221ENST00000532331 SLC4A10Q6U841 1118 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-221ENST00000532331 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-221ENST00000532331 TMEM132EQ6IEE7 984 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-221ENST00000532331 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 NUTM2GQ5VZR2 741 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 GRIN2AQ12879 1464 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
PTPRK-221ENST00000532331 MIA2Q96PC5 1412 aa14.25□□□□□ -0.13
PTPRK-221ENST00000532331 NLRP6P59044 892 aa14.25□□□□□ -0.13
PTPRK-221ENST00000532331 SMC4Q9NTJ3 1288 aa14.25□□□□□ -0.13
PTPRK-221ENST00000532331 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
PTPRK-221ENST00000532331 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
PTPRK-221ENST00000532331 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
PTPRK-221ENST00000532331 IQGAP2Q13576 1575 aa14.24□□□□□ -0.13
PTPRK-221ENST00000532331 MCCP23508 829 aa14.24□□□□□ -0.13
PTPRK-221ENST00000532331 USP47Q96K76 1375 aa14.23□□□□□ -0.13
PTPRK-221ENST00000532331 EHBP1L1Q8N3D4 1523 aa14.23□□□□□ -0.13
PTPRK-221ENST00000532331 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
PTPRK-221ENST00000532331 HSCBQ8IWL3 235 aa14.22□□□□□ -0.13
PTPRK-221ENST00000532331 GPATCH3Q96I76 525 aa14.22□□□□□ -0.13
PTPRK-221ENST00000532331 DIAPH1O60610 1272 aaKnown RBP14.22□□□□□ -0.13
PTPRK-221ENST00000532331 USP35Q9P2H5 1018 aa14.21□□□□□ -0.13
PTPRK-221ENST00000532331 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
PTPRK-221ENST00000532331 HMMRO75330 724 aa14.21□□□□□ -0.14
PTPRK-221ENST00000532331 KIAA1211Q6ZU35 1233 aa14.21□□□□□ -0.14
PTPRK-221ENST00000532331 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.14
PTPRK-221ENST00000532331 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.14
PTPRK-221ENST00000532331 NOP58Q9Y2X3 529 aaKnown RBP14.2□□□□□ -0.14
PTPRK-221ENST00000532331 NGEFQ8N5V2 710 aa14.2□□□□□ -0.14
PTPRK-221ENST00000532331 PRXQ9BXM0 1461 aa14.19□□□□□ -0.14
PTPRK-221ENST00000532331 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
PTPRK-221ENST00000532331 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
PTPRK-221ENST00000532331 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
PTPRK-221ENST00000532331 RRP7AQ9Y3A4 280 aaKnown RBP14.19□□□□□ -0.14
PTPRK-221ENST00000532331 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-221ENST00000532331 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms