RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
CLNS1A-211ENST00000532069 KIAA1107Q9UPP5 1409 aa21.53■■□□□ 1.04
CLNS1A-211ENST00000532069 MED14O60244 1454 aa21.52■■□□□ 1.03
CLNS1A-211ENST00000532069 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
CLNS1A-211ENST00000532069 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
CLNS1A-211ENST00000532069 HNRNPMP52272 730 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLNS1A-211ENST00000532069 IQGAP1P46940 1657 aa21.49■■□□□ 1.03
CLNS1A-211ENST00000532069 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
CLNS1A-211ENST00000532069 NLRP1Q9C000 1473 aa21.47■■□□□ 1.03
CLNS1A-211ENST00000532069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
CLNS1A-211ENST00000532069 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
CLNS1A-211ENST00000532069 PZPP20742 1482 aa21.46■■□□□ 1.03
CLNS1A-211ENST00000532069 UGGT1Q9NYU2 1555 aa21.46■■□□□ 1.03
CLNS1A-211ENST00000532069 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
CLNS1A-211ENST00000532069 LRRC7Q96NW7 1537 aa21.45■■□□□ 1.02
CLNS1A-211ENST00000532069 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
CLNS1A-211ENST00000532069 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
CLNS1A-211ENST00000532069 CFDP1Q9UEE9 299 aaPredicted RBP21.42■■□□□ 1.02
CLNS1A-211ENST00000532069 STRCP1A6NGW2 1772 aa21.39■■□□□ 1.01
CLNS1A-211ENST00000532069 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
CLNS1A-211ENST00000532069 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
CLNS1A-211ENST00000532069 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
CLNS1A-211ENST00000532069 DHX29Q7Z478 1369 aaKnown RBP21.37■■□□□ 1.01
CLNS1A-211ENST00000532069 FYCO1Q9BQS8 1478 aa21.37■■□□□ 1.01
CLNS1A-211ENST00000532069 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
CLNS1A-211ENST00000532069 WASHC2CQ9Y4E1 1318 aa21.36■■□□□ 1.01
CLNS1A-211ENST00000532069 POTEAQ6S8J7 498 aa21.34■■□□□ 1.01
CLNS1A-211ENST00000532069 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
CLNS1A-211ENST00000532069 KIF3BO15066 747 aa21.32■■□□□ 1
CLNS1A-211ENST00000532069 FAM135BQ49AJ0 1406 aa21.31■■□□□ 1
CLNS1A-211ENST00000532069 ZC3H13Q5T200 1668 aaKnown RBP21.29■■□□□ 1
CLNS1A-211ENST00000532069 SETD1AO15047 1707 aaKnown RBP21.28■■□□□ 1
CLNS1A-211ENST00000532069 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
CLNS1A-211ENST00000532069 MBD5Q9P267 1494 aa21.24■□□□□ 0.99
CLNS1A-211ENST00000532069 SCAF11Q99590 1463 aaKnown RBP21.23■□□□□ 0.99
CLNS1A-211ENST00000532069 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
CLNS1A-211ENST00000532069 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
CLNS1A-211ENST00000532069 RSPH4AQ5TD94 716 aa21.2■□□□□ 0.98
CLNS1A-211ENST00000532069 ROBO1Q9Y6N7 1651 aa21.2■□□□□ 0.98
CLNS1A-211ENST00000532069 CCDC141Q6ZP82 1450 aa21.2■□□□□ 0.98
CLNS1A-211ENST00000532069 UBR1Q8IWV7 1749 aa21.19■□□□□ 0.98
CLNS1A-211ENST00000532069 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
CLNS1A-211ENST00000532069 EID1Q9Y6B2 187 aa21.16■□□□□ 0.98
CLNS1A-211ENST00000532069 ERVK-7P63135 1459 aa21.15■□□□□ 0.98
CLNS1A-211ENST00000532069 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
CLNS1A-211ENST00000532069 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLNS1A-211ENST00000532069 SLIT1O75093 1534 aa21.14■□□□□ 0.98
CLNS1A-211ENST00000532069 JCADQ9P266 1359 aa21.14■□□□□ 0.98
CLNS1A-211ENST00000532069 TXNDC2Q86VQ3 553 aa21.13■□□□□ 0.97
CLNS1A-211ENST00000532069 ABCC3O15438 1527 aa21.12■□□□□ 0.97
CLNS1A-211ENST00000532069 EHBP1L1Q8N3D4 1523 aa21.12■□□□□ 0.97
CLNS1A-211ENST00000532069 ARHGAP23Q9P227 1491 aa21.12■□□□□ 0.97
CLNS1A-211ENST00000532069 PHLPP1O60346 1717 aa21.12■□□□□ 0.97
CLNS1A-211ENST00000532069 ZNF772Q68DY9 489 aaPredicted RBP21.11■□□□□ 0.97
CLNS1A-211ENST00000532069 TMEM94Q12767 1356 aa21.1■□□□□ 0.97
CLNS1A-211ENST00000532069 EIF2AK4Q9P2K8 1649 aaKnown RBP21.08■□□□□ 0.97
CLNS1A-211ENST00000532069 TSPY4P0CV99 314 aa21.08■□□□□ 0.97
CLNS1A-211ENST00000532069 TSPY10P0CW01 314 aa21.08■□□□□ 0.97
CLNS1A-211ENST00000532069 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
CLNS1A-211ENST00000532069 LTKP29376 864 aa21.06■□□□□ 0.96
CLNS1A-211ENST00000532069 CAMSAP2Q08AD1 1489 aa21.06■□□□□ 0.96
CLNS1A-211ENST00000532069 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
CLNS1A-211ENST00000532069 CFAP65Q6ZU64 1925 aaKnown RBP21.06■□□□□ 0.96
CLNS1A-211ENST00000532069 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
CLNS1A-211ENST00000532069 MSH6P52701 1360 aa21.05■□□□□ 0.96
CLNS1A-211ENST00000532069 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
CLNS1A-211ENST00000532069 SPATA31A6Q5VVP1 1343 aa21.04■□□□□ 0.96
CLNS1A-211ENST00000532069 KCNA6P17658 529 aa21.04■□□□□ 0.96
CLNS1A-211ENST00000532069 PROSER2Q86WR7 435 aaPredicted RBP21.04■□□□□ 0.96
CLNS1A-211ENST00000532069 NKTRP30414 1462 aaKnown RBP21.03■□□□□ 0.96
CLNS1A-211ENST00000532069 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
CLNS1A-211ENST00000532069 CEP152O94986 1710 aa21.03■□□□□ 0.96
CLNS1A-211ENST00000532069 MAP3K1Q13233 1512 aa21.03■□□□□ 0.96
CLNS1A-211ENST00000532069 PRDM15P57071 1507 aaPredicted RBP21.02■□□□□ 0.96
CLNS1A-211ENST00000532069 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
CLNS1A-211ENST00000532069 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
CLNS1A-211ENST00000532069 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
CLNS1A-211ENST00000532069 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
CLNS1A-211ENST00000532069 TMEM2Q9UHN6 1383 aa20.99■□□□□ 0.95
CLNS1A-211ENST00000532069 RXRBP28702 533 aa20.99■□□□□ 0.95
CLNS1A-211ENST00000532069 FOXD1Q16676 465 aa20.98■□□□□ 0.95
CLNS1A-211ENST00000532069 SLAIN2Q9P270 581 aa20.98■□□□□ 0.95
CLNS1A-211ENST00000532069 COL16A1Q07092 1604 aaPredicted RBP20.97■□□□□ 0.95
CLNS1A-211ENST00000532069 NWD1Q149M9 1564 aa20.97■□□□□ 0.95
CLNS1A-211ENST00000532069 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
CLNS1A-211ENST00000532069 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
CLNS1A-211ENST00000532069 PIK3C2BO00750 1634 aa20.96■□□□□ 0.95
CLNS1A-211ENST00000532069 MROH1Q8NDA8 1641 aa20.94■□□□□ 0.94
CLNS1A-211ENST00000532069 SHPRHQ149N8 1683 aa20.94■□□□□ 0.94
CLNS1A-211ENST00000532069 EFCAB6Q5THR3 1501 aa20.94■□□□□ 0.94
CLNS1A-211ENST00000532069 LRP6O75581 1613 aa20.93■□□□□ 0.94
CLNS1A-211ENST00000532069 TET3O43151 1660 aa20.9■□□□□ 0.94
CLNS1A-211ENST00000532069 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.93
CLNS1A-211ENST00000532069 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
CLNS1A-211ENST00000532069 AHDC1Q5TGY3 1603 aaPredicted RBP20.87■□□□□ 0.93
CLNS1A-211ENST00000532069 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
CLNS1A-211ENST00000532069 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
CLNS1A-211ENST00000532069 BCANQ96GW7 911 aa20.86■□□□□ 0.93
CLNS1A-211ENST00000532069 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.93
CLNS1A-211ENST00000532069 KANK1Q14678 1352 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms