RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
CLNS1A-211ENST00000532069 ABCC9O60706 1549 aa31.26■■■□□ 2.59
CLNS1A-211ENST00000532069 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
CLNS1A-211ENST00000532069 DNAJC5BQ9UF47 199 aa29.91■■■□□ 2.38
CLNS1A-211ENST00000532069 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
CLNS1A-211ENST00000532069 NACADO15069 1562 aa29.12■■■□□ 2.25
CLNS1A-211ENST00000532069 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
CLNS1A-211ENST00000532069 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
CLNS1A-211ENST00000532069 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
CLNS1A-211ENST00000532069 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
CLNS1A-211ENST00000532069 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.15
CLNS1A-211ENST00000532069 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
CLNS1A-211ENST00000532069 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
CLNS1A-211ENST00000532069 DNAJC5Q9H3Z4 198 aa28.26■■■□□ 2.11
CLNS1A-211ENST00000532069 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
CLNS1A-211ENST00000532069 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
CLNS1A-211ENST00000532069 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
CLNS1A-211ENST00000532069 SCRIBQ14160 1630 aa27.7■■■□□ 2.03
CLNS1A-211ENST00000532069 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
CLNS1A-211ENST00000532069 CUX2O14529 1486 aa27.44■■□□□ 1.98
CLNS1A-211ENST00000532069 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
CLNS1A-211ENST00000532069 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
CLNS1A-211ENST00000532069 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
CLNS1A-211ENST00000532069 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
CLNS1A-211ENST00000532069 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
CLNS1A-211ENST00000532069 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
CLNS1A-211ENST00000532069 THOC2Q8NI27 1593 aaKnown RBP26.57■■□□□ 1.84
CLNS1A-211ENST00000532069 NESP48681 1621 aa26.56■■□□□ 1.84
CLNS1A-211ENST00000532069 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
CLNS1A-211ENST00000532069 SMARCA4P51532 1647 aa26.39■■□□□ 1.81
CLNS1A-211ENST00000532069 BAZ1BQ9UIG0 1483 aaKnown RBP26.35■■□□□ 1.81
CLNS1A-211ENST00000532069 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
CLNS1A-211ENST00000532069 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
CLNS1A-211ENST00000532069 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
CLNS1A-211ENST00000532069 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
CLNS1A-211ENST00000532069 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
CLNS1A-211ENST00000532069 WDR62O43379 1518 aa26.04■■□□□ 1.76
CLNS1A-211ENST00000532069 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
CLNS1A-211ENST00000532069 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
CLNS1A-211ENST00000532069 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
CLNS1A-211ENST00000532069 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
CLNS1A-211ENST00000532069 RIMBP3CA6NJZ7 1639 aa25.72■■□□□ 1.71
CLNS1A-211ENST00000532069 RIMBP3BA6NNM3 1639 aa25.72■■□□□ 1.71
CLNS1A-211ENST00000532069 RIMBP3Q9UFD9 1639 aa25.72■■□□□ 1.71
CLNS1A-211ENST00000532069 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
CLNS1A-211ENST00000532069 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
CLNS1A-211ENST00000532069 CFTRP13569 1480 aa25.48■■□□□ 1.67
CLNS1A-211ENST00000532069 WIZO95785 1651 aa25.45■■□□□ 1.67
CLNS1A-211ENST00000532069 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
CLNS1A-211ENST00000532069 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
CLNS1A-211ENST00000532069 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
CLNS1A-211ENST00000532069 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
CLNS1A-211ENST00000532069 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
CLNS1A-211ENST00000532069 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
CLNS1A-211ENST00000532069 ZNF608Q9ULD9 1512 aaPredicted RBP25.24■■□□□ 1.63
CLNS1A-211ENST00000532069 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
CLNS1A-211ENST00000532069 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
CLNS1A-211ENST00000532069 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
CLNS1A-211ENST00000532069 CHD1O14646 1710 aa25.15■■□□□ 1.62
CLNS1A-211ENST00000532069 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
CLNS1A-211ENST00000532069 ABCC8Q09428 1581 aa25.11■■□□□ 1.61
CLNS1A-211ENST00000532069 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
CLNS1A-211ENST00000532069 FBLN2P98095 1184 aa25■■□□□ 1.59
CLNS1A-211ENST00000532069 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
CLNS1A-211ENST00000532069 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.587e-8■■■■□ 26.4
CLNS1A-211ENST00000532069 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
CLNS1A-211ENST00000532069 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
CLNS1A-211ENST00000532069 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
CLNS1A-211ENST00000532069 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
CLNS1A-211ENST00000532069 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
CLNS1A-211ENST00000532069 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
CLNS1A-211ENST00000532069 CHMP7Q8WUX9 453 aaPredicted RBP24.72■■□□□ 1.55
CLNS1A-211ENST00000532069 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.55
CLNS1A-211ENST00000532069 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
CLNS1A-211ENST00000532069 SOGA1O94964 1423 aa24.65■■□□□ 1.54
CLNS1A-211ENST00000532069 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
CLNS1A-211ENST00000532069 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
CLNS1A-211ENST00000532069 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
CLNS1A-211ENST00000532069 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
CLNS1A-211ENST00000532069 GRIN2BQ13224 1484 aa24.58■■□□□ 1.52
CLNS1A-211ENST00000532069 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
CLNS1A-211ENST00000532069 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
CLNS1A-211ENST00000532069 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
CLNS1A-211ENST00000532069 KIF13AQ9H1H9 1805 aa24.33■■□□□ 1.49
CLNS1A-211ENST00000532069 CUX1P39880 1505 aa24.29■■□□□ 1.48
CLNS1A-211ENST00000532069 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
CLNS1A-211ENST00000532069 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
CLNS1A-211ENST00000532069 ILDR1Q86SU0 546 aaPredicted RBP24.25■■□□□ 1.47
CLNS1A-211ENST00000532069 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
CLNS1A-211ENST00000532069 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
CLNS1A-211ENST00000532069 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.46
CLNS1A-211ENST00000532069 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
CLNS1A-211ENST00000532069 NUP160Q12769 1436 aa24.17■■□□□ 1.46
CLNS1A-211ENST00000532069 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
CLNS1A-211ENST00000532069 ABCC10Q5T3U5 1492 aa24.1■■□□□ 1.45
CLNS1A-211ENST00000532069 NPM1P06748 294 aaKnown RBP eCLIP24.09■■□□□ 1.45
CLNS1A-211ENST00000532069 FAM69CQ0P6D2 419 aa24.09■■□□□ 1.45
CLNS1A-211ENST00000532069 KDM6BO15054 1643 aa24.09■■□□□ 1.45
CLNS1A-211ENST00000532069 KDM4FA0A1W2PPD8 638 aa24.06■■□□□ 1.44
CLNS1A-211ENST00000532069 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms