RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
C11orf54-209ENST00000530620 SPAG9O60271 1321 aaKnown RBP17.23■□□□□ 0.35
C11orf54-209ENST00000530620 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.35
C11orf54-209ENST00000530620 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
C11orf54-209ENST00000530620 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
C11orf54-209ENST00000530620 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
C11orf54-209ENST00000530620 A2MP01023 1474 aa17.21■□□□□ 0.35
C11orf54-209ENST00000530620 CERKQ8TCT0 537 aa17.21■□□□□ 0.35
C11orf54-209ENST00000530620 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
C11orf54-209ENST00000530620 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
C11orf54-209ENST00000530620 NPATQ14207 1427 aa17.18■□□□□ 0.34
C11orf54-209ENST00000530620 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
C11orf54-209ENST00000530620 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
C11orf54-209ENST00000530620 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
C11orf54-209ENST00000530620 PTPRTO14522 1441 aa17.15■□□□□ 0.34
C11orf54-209ENST00000530620 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
C11orf54-209ENST00000530620 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
C11orf54-209ENST00000530620 CAMSAP2Q08AD1 1489 aa17.13■□□□□ 0.33
C11orf54-209ENST00000530620 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
C11orf54-209ENST00000530620 CEP170BQ9Y4F5 1589 aaPredicted RBP17.13■□□□□ 0.33
C11orf54-209ENST00000530620 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
C11orf54-209ENST00000530620 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
C11orf54-209ENST00000530620 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
C11orf54-209ENST00000530620 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
C11orf54-209ENST00000530620 RTEL1-TNFRSF6BF6WH68 1400 aa17.1■□□□□ 0.33
C11orf54-209ENST00000530620 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.32
C11orf54-209ENST00000530620 GGT6Q6P531 493 aa17.08■□□□□ 0.32
C11orf54-209ENST00000530620 POLR1AO95602 1720 aaPredicted RBP17.06■□□□□ 0.32
C11orf54-209ENST00000530620 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
C11orf54-209ENST00000530620 KDM5DQ9BY66 1539 aa17.05■□□□□ 0.32
C11orf54-209ENST00000530620 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
C11orf54-209ENST00000530620 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
C11orf54-209ENST00000530620 DNMT1P26358 1616 aaKnown RBP17.04■□□□□ 0.32
C11orf54-209ENST00000530620 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
C11orf54-209ENST00000530620 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
C11orf54-209ENST00000530620 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
C11orf54-209ENST00000530620 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.32
C11orf54-209ENST00000530620 A2ML1A8K2U0 1454 aa17.01■□□□□ 0.31
C11orf54-209ENST00000530620 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
C11orf54-209ENST00000530620 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
C11orf54-209ENST00000530620 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
C11orf54-209ENST00000530620 PZPP20742 1482 aa16.99■□□□□ 0.31
C11orf54-209ENST00000530620 ZC3H13Q5T200 1668 aaKnown RBP16.99■□□□□ 0.31
C11orf54-209ENST00000530620 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
C11orf54-209ENST00000530620 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
C11orf54-209ENST00000530620 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
C11orf54-209ENST00000530620 KIF3BO15066 747 aa16.97■□□□□ 0.31
C11orf54-209ENST00000530620 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
C11orf54-209ENST00000530620 CEP152O94986 1710 aa16.96■□□□□ 0.31
C11orf54-209ENST00000530620 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
C11orf54-209ENST00000530620 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.3
C11orf54-209ENST00000530620 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.3
C11orf54-209ENST00000530620 TNRQ92752 1358 aa16.95■□□□□ 0.3
C11orf54-209ENST00000530620 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
C11orf54-209ENST00000530620 PKD2Q13563 968 aa16.94■□□□□ 0.3
C11orf54-209ENST00000530620 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
C11orf54-209ENST00000530620 FBXO31Q5XUX0 539 aaPredicted RBP16.93■□□□□ 0.3
C11orf54-209ENST00000530620 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
C11orf54-209ENST00000530620 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
C11orf54-209ENST00000530620 ABCC3O15438 1527 aa16.92■□□□□ 0.3
C11orf54-209ENST00000530620 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
C11orf54-209ENST00000530620 MKRN4PQ13434 485 aaPredicted RBP16.91■□□□□ 0.3
C11orf54-209ENST00000530620 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
C11orf54-209ENST00000530620 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
C11orf54-209ENST00000530620 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
C11orf54-209ENST00000530620 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
C11orf54-209ENST00000530620 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
C11orf54-209ENST00000530620 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
C11orf54-209ENST00000530620 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
C11orf54-209ENST00000530620 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
C11orf54-209ENST00000530620 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
C11orf54-209ENST00000530620 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
C11orf54-209ENST00000530620 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
C11orf54-209ENST00000530620 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
C11orf54-209ENST00000530620 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
C11orf54-209ENST00000530620 UBR1Q8IWV7 1749 aa16.85■□□□□ 0.29
C11orf54-209ENST00000530620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.85■□□□□ 0.29
C11orf54-209ENST00000530620 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
C11orf54-209ENST00000530620 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
C11orf54-209ENST00000530620 CPS1P31327 1500 aa16.85■□□□□ 0.29
C11orf54-209ENST00000530620 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
C11orf54-209ENST00000530620 MED14O60244 1454 aa16.82■□□□□ 0.28
C11orf54-209ENST00000530620 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
C11orf54-209ENST00000530620 ABCC5O15440 1437 aa16.8■□□□□ 0.28
C11orf54-209ENST00000530620 NPHP4O75161 1426 aaPredicted RBP16.8■□□□□ 0.28
C11orf54-209ENST00000530620 ILDR2Q71H61 639 aa16.8■□□□□ 0.28
C11orf54-209ENST00000530620 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
C11orf54-209ENST00000530620 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
C11orf54-209ENST00000530620 ANKLE2Q86XL3 938 aa16.78■□□□□ 0.28
C11orf54-209ENST00000530620 THEMISQ8N1K5 641 aaPredicted RBP16.78■□□□□ 0.28
C11orf54-209ENST00000530620 DAPK1P53355 1430 aa16.78■□□□□ 0.28
C11orf54-209ENST00000530620 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
C11orf54-209ENST00000530620 SYNMO15061 1565 aa16.77■□□□□ 0.28
C11orf54-209ENST00000530620 PIK3C2BO00750 1634 aa16.76■□□□□ 0.27
C11orf54-209ENST00000530620 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
C11orf54-209ENST00000530620 ARHGAP31Q2M1Z3 1444 aa16.73■□□□□ 0.27
C11orf54-209ENST00000530620 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
C11orf54-209ENST00000530620 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
C11orf54-209ENST00000530620 SLIT1O75093 1534 aa16.72■□□□□ 0.27
C11orf54-209ENST00000530620 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 610.7 ms