RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 FAM135AQ9P2D6 1515 aa29.22■■■□□ 2.27
PCNX3-203ENST00000530174 EIF2AK4Q9P2K8 1649 aaKnown RBP29.2■■■□□ 2.27
PCNX3-203ENST00000530174 RNF17Q9BXT8 1623 aaKnown RBP29.2■■■□□ 2.26
PCNX3-203ENST00000530174 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.26
PCNX3-203ENST00000530174 KIF15Q9NS87 1388 aa29.17■■■□□ 2.26
PCNX3-203ENST00000530174 WASHC2CQ9Y4E1 1318 aa29.17■■■□□ 2.26
PCNX3-203ENST00000530174 MYO3AQ8NEV4 1616 aa29.15■■■□□ 2.26
PCNX3-203ENST00000530174 STRCQ7RTU9 1775 aa29.14■■■□□ 2.26
PCNX3-203ENST00000530174 RRP7BPQ9NSQ0 103 aa29.14■■■□□ 2.26
PCNX3-203ENST00000530174 FAM50AQ14320 339 aaKnown RBP29.13■■■□□ 2.25
PCNX3-203ENST00000530174 MROH1Q8NDA8 1641 aa29.12■■■□□ 2.25
PCNX3-203ENST00000530174 PZPP20742 1482 aa29.11■■■□□ 2.25
PCNX3-203ENST00000530174 CHIC2Q9UKJ5 165 aa29.11■■■□□ 2.25
PCNX3-203ENST00000530174 ERBINQ96RT1 1412 aa29.11■■■□□ 2.25
PCNX3-203ENST00000530174 ZNF142P52746 1687 aaPredicted RBP29.1■■■□□ 2.25
PCNX3-203ENST00000530174 ABCC3O15438 1527 aa29.1■■■□□ 2.25
PCNX3-203ENST00000530174 ANKRD30AQ9BXX3 1397 aa29.09■■■□□ 2.25
PCNX3-203ENST00000530174 ZC3H13Q5T200 1668 aaKnown RBP29.09■■■□□ 2.25
PCNX3-203ENST00000530174 FBXO31Q5XUX0 539 aaPredicted RBP29.08■■■□□ 2.25
PCNX3-203ENST00000530174 CEP170BQ9Y4F5 1589 aaPredicted RBP29.08■■■□□ 2.25
PCNX3-203ENST00000530174 NCOA1Q15788 1441 aa29.05■■■□□ 2.24
PCNX3-203ENST00000530174 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
PCNX3-203ENST00000530174 CAMSAP1Q5T5Y3 1602 aa29.05■■■□□ 2.24
PCNX3-203ENST00000530174 TNRQ92752 1358 aa29.04■■■□□ 2.24
PCNX3-203ENST00000530174 ILDR1Q86SU0 546 aaPredicted RBP29.04■■■□□ 2.24
PCNX3-203ENST00000530174 ADGRL2O95490 1459 aa29.04■■■□□ 2.24
PCNX3-203ENST00000530174 DMRT2Q9Y5R5 561 aa29.03■■■□□ 2.24
PCNX3-203ENST00000530174 PRDM15P57071 1507 aaPredicted RBP29.03■■■□□ 2.24
PCNX3-203ENST00000530174 CEP152O94986 1710 aa29.02■■■□□ 2.24
PCNX3-203ENST00000530174 A2ML1A8K2U0 1454 aa29■■■□□ 2.23
PCNX3-203ENST00000530174 DEPDC5O75140 1603 aa28.99■■■□□ 2.23
PCNX3-203ENST00000530174 PTPRTO14522 1441 aa28.98■■■□□ 2.23
PCNX3-203ENST00000530174 PLA2R1Q13018 1463 aa28.96■■■□□ 2.23
PCNX3-203ENST00000530174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.95■■■□□ 2.22
PCNX3-203ENST00000530174 SPATA31D1Q6ZQQ2 1576 aa28.94■■■□□ 2.22
PCNX3-203ENST00000530174 ERVK-7P63135 1459 aa28.92■■■□□ 2.22
PCNX3-203ENST00000530174 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
PCNX3-203ENST00000530174 NLRP1Q9C000 1473 aa28.91■■■□□ 2.22
PCNX3-203ENST00000530174 KANK1Q14678 1352 aa28.9■■■□□ 2.22
PCNX3-203ENST00000530174 ANKRD50Q9ULJ7 1429 aa28.89■■■□□ 2.22
PCNX3-203ENST00000530174 ARHGAP31Q2M1Z3 1444 aa28.88■■■□□ 2.21
PCNX3-203ENST00000530174 PKD2Q13563 968 aa28.88■■■□□ 2.21
PCNX3-203ENST00000530174 VWDEQ8N2E2 1590 aa28.88■■■□□ 2.21
PCNX3-203ENST00000530174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.87■■■□□ 2.21
PCNX3-203ENST00000530174 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
PCNX3-203ENST00000530174 FBXO41Q8TF61 875 aa28.86■■■□□ 2.21
PCNX3-203ENST00000530174 CERKQ8TCT0 537 aa28.85■■■□□ 2.21
PCNX3-203ENST00000530174 LMTK2Q8IWU2 1503 aa28.84■■■□□ 2.21
PCNX3-203ENST00000530174 UGGT1Q9NYU2 1555 aa28.84■■■□□ 2.21
PCNX3-203ENST00000530174 ROCK1Q13464 1354 aa28.84■■■□□ 2.21
PCNX3-203ENST00000530174 ITGAEP38570 1179 aa28.82■■■□□ 2.2
PCNX3-203ENST00000530174 THEMISQ8N1K5 641 aaPredicted RBP28.8■■■□□ 2.2
PCNX3-203ENST00000530174 POLR1AO95602 1720 aaPredicted RBP28.79■■■□□ 2.2
PCNX3-203ENST00000530174 RRBP1Q9P2E9 1410 aaKnown RBP28.78■■■□□ 2.2
PCNX3-203ENST00000530174 NEURL4Q96JN8 1562 aa28.76■■■□□ 2.19
PCNX3-203ENST00000530174 EFCAB6Q5THR3 1501 aa28.76■■■□□ 2.19
PCNX3-203ENST00000530174 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.19
PCNX3-203ENST00000530174 UNC13BO14795 1591 aa28.74■■■□□ 2.19
PCNX3-203ENST00000530174 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
PCNX3-203ENST00000530174 ANKLE2Q86XL3 938 aa28.72■■■□□ 2.19
PCNX3-203ENST00000530174 ZNF335Q9H4Z2 1342 aaPredicted RBP28.7■■■□□ 2.19
PCNX3-203ENST00000530174 NOS1P29475 1434 aa28.68■■■□□ 2.18
PCNX3-203ENST00000530174 TET3O43151 1660 aa28.67■■■□□ 2.18
PCNX3-203ENST00000530174 SYNMO15061 1565 aa28.67■■■□□ 2.18
PCNX3-203ENST00000530174 PIK3C2BO00750 1634 aa28.67■■■□□ 2.18
PCNX3-203ENST00000530174 MED14O60244 1454 aa28.66■■■□□ 2.18
PCNX3-203ENST00000530174 RPRD2Q5VT52 1461 aaKnown RBP28.66■■■□□ 2.18
PCNX3-203ENST00000530174 NPHP4O75161 1426 aaPredicted RBP28.64■■■□□ 2.18
PCNX3-203ENST00000530174 GCC2Q8IWJ2 1684 aa28.63■■■□□ 2.17
PCNX3-203ENST00000530174 IQGAP3Q86VI3 1631 aa28.61■■■□□ 2.17
PCNX3-203ENST00000530174 IDI1Q13907 227 aa28.61■■■□□ 2.17
PCNX3-203ENST00000530174 ARHGAP23Q9P227 1491 aa28.6■■■□□ 2.17
PCNX3-203ENST00000530174 SLIT1O75093 1534 aa28.6■■■□□ 2.17
PCNX3-203ENST00000530174 IQGAP1P46940 1657 aa28.6■■■□□ 2.17
PCNX3-203ENST00000530174 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
PCNX3-203ENST00000530174 STAG3Q9UJ98 1225 aa28.58■■■□□ 2.17
PCNX3-203ENST00000530174 NUP155O75694 1391 aa28.58■■■□□ 2.17
PCNX3-203ENST00000530174 SCAF11Q99590 1463 aaKnown RBP28.58■■■□□ 2.17
PCNX3-203ENST00000530174 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.16
PCNX3-203ENST00000530174 E9PCH4 1651 aa28.56■■■□□ 2.16
PCNX3-203ENST00000530174 ADGRB3O60242 1522 aa28.54■■■□□ 2.16
PCNX3-203ENST00000530174 TMEM2Q9UHN6 1383 aa28.54■■■□□ 2.16
PCNX3-203ENST00000530174 LTKP29376 864 aa28.54■■■□□ 2.16
PCNX3-203ENST00000530174 SLC52A1Q9NWF4 448 aa28.54■■■□□ 2.16
PCNX3-203ENST00000530174 NAIPQ13075 1403 aa28.53■■■□□ 2.16
PCNX3-203ENST00000530174 TXNDC2Q86VQ3 553 aa28.53■■■□□ 2.16
PCNX3-203ENST00000530174 EID1Q9Y6B2 187 aa28.5■■■□□ 2.15
PCNX3-203ENST00000530174 CPS1P31327 1500 aa28.48■■■□□ 2.15
PCNX3-203ENST00000530174 HFM1A2PYH4 1435 aa28.46■■■□□ 2.15
PCNX3-203ENST00000530174 MYO5BQ9ULV0 1848 aa28.42■■■□□ 2.14
PCNX3-203ENST00000530174 TMEM131LA2VDJ0 1609 aa28.42■■■□□ 2.14
PCNX3-203ENST00000530174 STRCP1A6NGW2 1772 aa28.4■■■□□ 2.14
PCNX3-203ENST00000530174 UBAP1LF5GYI3 381 aa28.37■■■□□ 2.13
PCNX3-203ENST00000530174 ZFYVE9O95405 1425 aa28.36■■■□□ 2.13
PCNX3-203ENST00000530174 SPHKAPQ2M3C7 1700 aa28.36■■■□□ 2.13
PCNX3-203ENST00000530174 CHGAP10645 457 aaKnown RBP28.36■■■□□ 2.13
PCNX3-203ENST00000530174 RIMS2Q9UQ26 1411 aa28.35■■■□□ 2.13
PCNX3-203ENST00000530174 TRIM52Q96A61 297 aa28.32■■■□□ 2.12
PCNX3-203ENST00000530174 LRRC7Q96NW7 1537 aa28.32■■■□□ 2.12
PCNX3-203ENST00000530174 SLC26A8Q96RN1 970 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms