RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 NEURL4Q96JN8 1562 aa19.07■□□□□ 0.64
AMBRA1-207ENST00000529553 MED14O60244 1454 aa19.07■□□□□ 0.64
AMBRA1-207ENST00000529553 RTEL1-TNFRSF6BF6WH68 1400 aa19.07■□□□□ 0.64
AMBRA1-207ENST00000529553 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
AMBRA1-207ENST00000529553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
AMBRA1-207ENST00000529553 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
AMBRA1-207ENST00000529553 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
AMBRA1-207ENST00000529553 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
AMBRA1-207ENST00000529553 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
AMBRA1-207ENST00000529553 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
AMBRA1-207ENST00000529553 RGS17Q9UGC6 210 aaPredicted RBP19.03■□□□□ 0.64
AMBRA1-207ENST00000529553 PZPP20742 1482 aa19.03■□□□□ 0.64
AMBRA1-207ENST00000529553 WASHC2CQ9Y4E1 1318 aa19.02■□□□□ 0.64
AMBRA1-207ENST00000529553 KIF3BO15066 747 aa19.02■□□□□ 0.64
AMBRA1-207ENST00000529553 POLR1AO95602 1720 aaPredicted RBP19.02■□□□□ 0.63
AMBRA1-207ENST00000529553 NLRP1Q9C000 1473 aa19.02■□□□□ 0.63
AMBRA1-207ENST00000529553 ADGBQ8N7X0 1667 aa19.01■□□□□ 0.63
AMBRA1-207ENST00000529553 FAM135AQ9P2D6 1515 aa19.01■□□□□ 0.63
AMBRA1-207ENST00000529553 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
AMBRA1-207ENST00000529553 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
AMBRA1-207ENST00000529553 RSPH4AQ5TD94 716 aa18.98■□□□□ 0.63
AMBRA1-207ENST00000529553 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
AMBRA1-207ENST00000529553 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
AMBRA1-207ENST00000529553 UGGT1Q9NYU2 1555 aa18.97■□□□□ 0.63
AMBRA1-207ENST00000529553 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
AMBRA1-207ENST00000529553 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
AMBRA1-207ENST00000529553 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
AMBRA1-207ENST00000529553 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.62
AMBRA1-207ENST00000529553 POTEAQ6S8J7 498 aa18.89■□□□□ 0.61
AMBRA1-207ENST00000529553 FAM135BQ49AJ0 1406 aa18.89■□□□□ 0.61
AMBRA1-207ENST00000529553 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
AMBRA1-207ENST00000529553 SYNMO15061 1565 aa18.88■□□□□ 0.61
AMBRA1-207ENST00000529553 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
AMBRA1-207ENST00000529553 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
AMBRA1-207ENST00000529553 TSPY10P0CW01 314 aa18.84■□□□□ 0.61
AMBRA1-207ENST00000529553 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.6
AMBRA1-207ENST00000529553 CEP162Q5TB80 1403 aa18.83■□□□□ 0.6
AMBRA1-207ENST00000529553 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
AMBRA1-207ENST00000529553 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
AMBRA1-207ENST00000529553 TXNDC2Q86VQ3 553 aa18.81■□□□□ 0.6
AMBRA1-207ENST00000529553 LTKP29376 864 aa18.8■□□□□ 0.6
AMBRA1-207ENST00000529553 SCAF11Q99590 1463 aaKnown RBP18.79■□□□□ 0.6
AMBRA1-207ENST00000529553 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
AMBRA1-207ENST00000529553 ERVK-7P63135 1459 aa18.77■□□□□ 0.6
AMBRA1-207ENST00000529553 EHBP1L1Q8N3D4 1523 aa18.76■□□□□ 0.59
AMBRA1-207ENST00000529553 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
AMBRA1-207ENST00000529553 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
AMBRA1-207ENST00000529553 ABCC3O15438 1527 aa18.75■□□□□ 0.59
AMBRA1-207ENST00000529553 SLIT1O75093 1534 aa18.74■□□□□ 0.59
AMBRA1-207ENST00000529553 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
AMBRA1-207ENST00000529553 KCNA6P17658 529 aa18.74■□□□□ 0.59
AMBRA1-207ENST00000529553 CAMSAP2Q08AD1 1489 aa18.73■□□□□ 0.59
AMBRA1-207ENST00000529553 TMEM94Q12767 1356 aa18.71■□□□□ 0.59
AMBRA1-207ENST00000529553 ARHGEF5Q12774 1597 aa18.7■□□□□ 0.58
AMBRA1-207ENST00000529553 PROSER2Q86WR7 435 aaPredicted RBP18.69■□□□□ 0.58
AMBRA1-207ENST00000529553 UBR1Q8IWV7 1749 aa18.69■□□□□ 0.58
AMBRA1-207ENST00000529553 ARHGAP31Q2M1Z3 1444 aa18.68■□□□□ 0.58
AMBRA1-207ENST00000529553 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
AMBRA1-207ENST00000529553 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
AMBRA1-207ENST00000529553 JCADQ9P266 1359 aa18.67■□□□□ 0.58
AMBRA1-207ENST00000529553 LRRC9Q6ZRR7 1453 aa18.66■□□□□ 0.58
AMBRA1-207ENST00000529553 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
AMBRA1-207ENST00000529553 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
AMBRA1-207ENST00000529553 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
AMBRA1-207ENST00000529553 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
AMBRA1-207ENST00000529553 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
AMBRA1-207ENST00000529553 MAST1Q9Y2H9 1570 aa18.62■□□□□ 0.57
AMBRA1-207ENST00000529553 ROBO1Q9Y6N7 1651 aa18.62■□□□□ 0.57
AMBRA1-207ENST00000529553 MSH6P52701 1360 aa18.61■□□□□ 0.57
AMBRA1-207ENST00000529553 PRDM15P57071 1507 aaPredicted RBP18.6■□□□□ 0.57
AMBRA1-207ENST00000529553 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
AMBRA1-207ENST00000529553 SLC26A8Q96RN1 970 aa18.6■□□□□ 0.57
AMBRA1-207ENST00000529553 MROH1Q8NDA8 1641 aa18.6■□□□□ 0.57
AMBRA1-207ENST00000529553 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
AMBRA1-207ENST00000529553 IDI1Q13907 227 aa18.58■□□□□ 0.56
AMBRA1-207ENST00000529553 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.56
AMBRA1-207ENST00000529553 TET3O43151 1660 aa18.57■□□□□ 0.56
AMBRA1-207ENST00000529553 DUOX2Q9NRD8 1548 aa18.57■□□□□ 0.56
AMBRA1-207ENST00000529553 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
AMBRA1-207ENST00000529553 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
AMBRA1-207ENST00000529553 RXRBP28702 533 aa18.54■□□□□ 0.56
AMBRA1-207ENST00000529553 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
AMBRA1-207ENST00000529553 EFCAB6Q5THR3 1501 aa18.54■□□□□ 0.56
AMBRA1-207ENST00000529553 NCOA3Q9Y6Q9 1424 aa18.53■□□□□ 0.56
AMBRA1-207ENST00000529553 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
AMBRA1-207ENST00000529553 SETD1AO15047 1707 aaKnown RBP18.52■□□□□ 0.56
AMBRA1-207ENST00000529553 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.56
AMBRA1-207ENST00000529553 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
AMBRA1-207ENST00000529553 SLC52A1Q9NWF4 448 aa18.52■□□□□ 0.56
AMBRA1-207ENST00000529553 KANK1Q14678 1352 aa18.52■□□□□ 0.55
AMBRA1-207ENST00000529553 PIK3C2BO00750 1634 aa18.52■□□□□ 0.55
AMBRA1-207ENST00000529553 CFAP65Q6ZU64 1925 aaKnown RBP18.51■□□□□ 0.55
AMBRA1-207ENST00000529553 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
AMBRA1-207ENST00000529553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
AMBRA1-207ENST00000529553 CEP152O94986 1710 aa18.51■□□□□ 0.55
AMBRA1-207ENST00000529553 PHLPP1O60346 1717 aa18.5■□□□□ 0.55
AMBRA1-207ENST00000529553 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
AMBRA1-207ENST00000529553 BCANQ96GW7 911 aa18.5■□□□□ 0.55
AMBRA1-207ENST00000529553 NWD1Q149M9 1564 aa18.5■□□□□ 0.55
AMBRA1-207ENST00000529553 KIF15Q9NS87 1388 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms