RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
CHD7-206ENST00000527900 CAMSAP1Q5T5Y3 1602 aa13.47□□□□□ -0.25
CHD7-206ENST00000527900 MYO3AQ8NEV4 1616 aa13.47□□□□□ -0.25
CHD7-206ENST00000527900 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
CHD7-206ENST00000527900 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
CHD7-206ENST00000527900 FAM135AQ9P2D6 1515 aa13.47□□□□□ -0.25
CHD7-206ENST00000527900 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
CHD7-206ENST00000527900 LTBP4Q8N2S1 1624 aa13.45□□□□□ -0.26
CHD7-206ENST00000527900 PLA2R1Q13018 1463 aa13.44□□□□□ -0.26
CHD7-206ENST00000527900 KDM5DQ9BY66 1539 aa13.44□□□□□ -0.26
CHD7-206ENST00000527900 PZPP20742 1482 aa13.43□□□□□ -0.26
CHD7-206ENST00000527900 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
CHD7-206ENST00000527900 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
CHD7-206ENST00000527900 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
CHD7-206ENST00000527900 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
CHD7-206ENST00000527900 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CHD7-206ENST00000527900 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
CHD7-206ENST00000527900 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
CHD7-206ENST00000527900 PKD2Q13563 968 aa13.41□□□□□ -0.26
CHD7-206ENST00000527900 MROH1Q8NDA8 1641 aa13.4□□□□□ -0.26
CHD7-206ENST00000527900 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
CHD7-206ENST00000527900 ABCC5O15440 1437 aa13.39□□□□□ -0.27
CHD7-206ENST00000527900 TNRQ92752 1358 aa13.39□□□□□ -0.27
CHD7-206ENST00000527900 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
CHD7-206ENST00000527900 ABCC3O15438 1527 aa13.38□□□□□ -0.27
CHD7-206ENST00000527900 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
CHD7-206ENST00000527900 IQSEC2Q5JU85 1478 aa13.37□□□□□ -0.27
CHD7-206ENST00000527900 SHANK2Q9UPX8 1470 aa13.37□□□□□ -0.27
CHD7-206ENST00000527900 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
CHD7-206ENST00000527900 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
CHD7-206ENST00000527900 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
CHD7-206ENST00000527900 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
CHD7-206ENST00000527900 APLP2Q06481 763 aa13.35□□□□□ -0.27
CHD7-206ENST00000527900 DAPK1P53355 1430 aa13.35□□□□□ -0.27
CHD7-206ENST00000527900 SPATA31D1Q6ZQQ2 1576 aa13.35□□□□□ -0.27
CHD7-206ENST00000527900 NEURL4Q96JN8 1562 aa13.35□□□□□ -0.27
CHD7-206ENST00000527900 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
CHD7-206ENST00000527900 KIF15Q9NS87 1388 aa13.33□□□□□ -0.27
CHD7-206ENST00000527900 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.27
CHD7-206ENST00000527900 CEP152O94986 1710 aa13.33□□□□□ -0.28
CHD7-206ENST00000527900 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
CHD7-206ENST00000527900 ERVK-7P63135 1459 aa13.32□□□□□ -0.28
CHD7-206ENST00000527900 THEMISQ8N1K5 641 aaPredicted RBP13.32□□□□□ -0.28
CHD7-206ENST00000527900 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
CHD7-206ENST00000527900 PRDM15P57071 1507 aaPredicted RBP13.32□□□□□ -0.28
CHD7-206ENST00000527900 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
CHD7-206ENST00000527900 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
CHD7-206ENST00000527900 ARHGAP31Q2M1Z3 1444 aa13.31□□□□□ -0.28
CHD7-206ENST00000527900 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
CHD7-206ENST00000527900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHD7-206ENST00000527900 MED14O60244 1454 aa13.3□□□□□ -0.28
CHD7-206ENST00000527900 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
CHD7-206ENST00000527900 ANKLE2Q86XL3 938 aa13.29□□□□□ -0.28
CHD7-206ENST00000527900 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
CHD7-206ENST00000527900 ADGRL2O95490 1459 aa13.28□□□□□ -0.28
CHD7-206ENST00000527900 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
CHD7-206ENST00000527900 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.29
CHD7-206ENST00000527900 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
CHD7-206ENST00000527900 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
CHD7-206ENST00000527900 NPHP4O75161 1426 aaPredicted RBP13.25□□□□□ -0.29
CHD7-206ENST00000527900 CPS1P31327 1500 aa13.23□□□□□ -0.29
CHD7-206ENST00000527900 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
CHD7-206ENST00000527900 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
CHD7-206ENST00000527900 SLIT1O75093 1534 aa13.23□□□□□ -0.29
CHD7-206ENST00000527900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.294e-7■■□□□ 14
CHD7-206ENST00000527900 STRCP1A6NGW2 1772 aa13.22□□□□□ -0.29
CHD7-206ENST00000527900 KANK1Q14678 1352 aa13.21□□□□□ -0.29
CHD7-206ENST00000527900 UBAP1LF5GYI3 381 aa13.21□□□□□ -0.29
CHD7-206ENST00000527900 LTKP29376 864 aa13.21□□□□□ -0.29
CHD7-206ENST00000527900 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
CHD7-206ENST00000527900 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
CHD7-206ENST00000527900 NOS1P29475 1434 aa13.2□□□□□ -0.3
CHD7-206ENST00000527900 PIK3C2BO00750 1634 aa13.2□□□□□ -0.3
CHD7-206ENST00000527900 IDI1Q13907 227 aa13.19□□□□□ -0.3
CHD7-206ENST00000527900 ANKRD50Q9ULJ7 1429 aa13.19□□□□□ -0.3
CHD7-206ENST00000527900 SYNMO15061 1565 aa13.19□□□□□ -0.3
CHD7-206ENST00000527900 EFCAB6Q5THR3 1501 aa13.18□□□□□ -0.3
CHD7-206ENST00000527900 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
CHD7-206ENST00000527900 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
CHD7-206ENST00000527900 TXNDC2Q86VQ3 553 aa13.17□□□□□ -0.3
CHD7-206ENST00000527900 TMEM2Q9UHN6 1383 aa13.17□□□□□ -0.3
CHD7-206ENST00000527900 ROCK1Q13464 1354 aa13.16□□□□□ -0.3
CHD7-206ENST00000527900 LRRC7Q96NW7 1537 aa13.15□□□□□ -0.3
CHD7-206ENST00000527900 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
CHD7-206ENST00000527900 TOM1O60784 492 aa13.14□□□□□ -0.31
CHD7-206ENST00000527900 UNC13BO14795 1591 aa13.14□□□□□ -0.31
CHD7-206ENST00000527900 TET3O43151 1660 aa13.13□□□□□ -0.31
CHD7-206ENST00000527900 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
CHD7-206ENST00000527900 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
CHD7-206ENST00000527900 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
CHD7-206ENST00000527900 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
CHD7-206ENST00000527900 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
CHD7-206ENST00000527900 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
CHD7-206ENST00000527900 ADGRB3O60242 1522 aa13.11□□□□□ -0.31
CHD7-206ENST00000527900 HSPA1LP34931 641 aa13.1□□□□□ -0.31
CHD7-206ENST00000527900 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
CHD7-206ENST00000527900 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
CHD7-206ENST00000527900 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
CHD7-206ENST00000527900 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
CHD7-206ENST00000527900 IQGAP3Q86VI3 1631 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 994.9 ms