RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 RNF17Q9BXT8 1623 aaKnown RBP34.8■■■■□ 3.16
LMNB2-204ENST00000527409 KDM5DQ9BY66 1539 aa34.79■■■■□ 3.16
LMNB2-204ENST00000527409 HSPA2P54652 639 aa34.76■■■■□ 3.16
LMNB2-204ENST00000527409 KIF15Q9NS87 1388 aa34.75■■■■□ 3.15
LMNB2-204ENST00000527409 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
LMNB2-204ENST00000527409 PTPRKQ15262 1439 aa34.71■■■■□ 3.15
LMNB2-204ENST00000527409 ERBINQ96RT1 1412 aa34.71■■■■□ 3.15
LMNB2-204ENST00000527409 ZC3H13Q5T200 1668 aaKnown RBP34.7■■■■□ 3.15
LMNB2-204ENST00000527409 ANKRD30AQ9BXX3 1397 aa34.7■■■■□ 3.15
LMNB2-204ENST00000527409 WASHC2CQ9Y4E1 1318 aa34.69■■■■□ 3.14
LMNB2-204ENST00000527409 RRP7BPQ9NSQ0 103 aa34.67■■■■□ 3.14
LMNB2-204ENST00000527409 MROH1Q8NDA8 1641 aa34.66■■■■□ 3.14
LMNB2-204ENST00000527409 ADGRL2O95490 1459 aa34.66■■■■□ 3.14
LMNB2-204ENST00000527409 MYO3AQ8NEV4 1616 aa34.64■■■■□ 3.14
LMNB2-204ENST00000527409 CHIC2Q9UKJ5 165 aa34.64■■■■□ 3.14
LMNB2-204ENST00000527409 PZPP20742 1482 aa34.64■■■■□ 3.14
LMNB2-204ENST00000527409 NCOA1Q15788 1441 aa34.64■■■■□ 3.14
LMNB2-204ENST00000527409 ZNF142P52746 1687 aaPredicted RBP34.62■■■■□ 3.13
LMNB2-204ENST00000527409 ABCC3O15438 1527 aa34.61■■■■□ 3.13
LMNB2-204ENST00000527409 PPARGC1BQ86YN6 1023 aaKnown RBP34.61■■■■□ 3.13
LMNB2-204ENST00000527409 PRDM15P57071 1507 aaPredicted RBP34.6■■■■□ 3.13
LMNB2-204ENST00000527409 DEPDC5O75140 1603 aa34.59■■■■□ 3.13
LMNB2-204ENST00000527409 CEP152O94986 1710 aa34.56■■■■□ 3.12
LMNB2-204ENST00000527409 STRCQ7RTU9 1775 aa34.56■■■■□ 3.12
LMNB2-204ENST00000527409 CEP170BQ9Y4F5 1589 aaPredicted RBP34.55■■■■□ 3.12
LMNB2-204ENST00000527409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.55■■■■□ 3.12
LMNB2-204ENST00000527409 CAMSAP1Q5T5Y3 1602 aa34.53■■■■□ 3.12
LMNB2-204ENST00000527409 TNRQ92752 1358 aa34.49■■■■□ 3.11
LMNB2-204ENST00000527409 FBXO31Q5XUX0 539 aaPredicted RBP34.49■■■■□ 3.11
LMNB2-204ENST00000527409 A2ML1A8K2U0 1454 aa34.46■■■■□ 3.11
LMNB2-204ENST00000527409 KANK1Q14678 1352 aa34.46■■■■□ 3.11
LMNB2-204ENST00000527409 DMRT2Q9Y5R5 561 aa34.45■■■■□ 3.11
LMNB2-204ENST00000527409 ROCK1Q13464 1354 aa34.45■■■■□ 3.11
LMNB2-204ENST00000527409 ANKRD50Q9ULJ7 1429 aa34.44■■■■□ 3.1
LMNB2-204ENST00000527409 SPATA31D1Q6ZQQ2 1576 aa34.44■■■■□ 3.1
LMNB2-204ENST00000527409 RRBP1Q9P2E9 1410 aaKnown RBP34.42■■■■□ 3.1
LMNB2-204ENST00000527409 VWDEQ8N2E2 1590 aa34.41■■■■□ 3.1
LMNB2-204ENST00000527409 NLRP1Q9C000 1473 aa34.41■■■■□ 3.1
LMNB2-204ENST00000527409 ARHGAP31Q2M1Z3 1444 aa34.41■■■■□ 3.1
LMNB2-204ENST00000527409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.41■■■■□ 3.13e-10■■■□□ 16.9
LMNB2-204ENST00000527409 PLA2R1Q13018 1463 aa34.4■■■■□ 3.1
LMNB2-204ENST00000527409 ERVK-7P63135 1459 aa34.39■■■■□ 3.1
LMNB2-204ENST00000527409 LMTK2Q8IWU2 1503 aa34.39■■■■□ 3.1
LMNB2-204ENST00000527409 PTPRTO14522 1441 aa34.38■■■■□ 3.09
LMNB2-204ENST00000527409 CFAP65Q6ZU64 1925 aaKnown RBP34.36■■■■□ 3.09
LMNB2-204ENST00000527409 ITGAEP38570 1179 aa34.34■■■■□ 3.09
LMNB2-204ENST00000527409 UNC13BO14795 1591 aa34.3■■■■□ 3.08
LMNB2-204ENST00000527409 UGGT1Q9NYU2 1555 aa34.3■■■■□ 3.08
LMNB2-204ENST00000527409 PKD2Q13563 968 aa34.29■■■■□ 3.08
LMNB2-204ENST00000527409 EFCAB6Q5THR3 1501 aa34.29■■■■□ 3.08
LMNB2-204ENST00000527409 POLR1AO95602 1720 aaPredicted RBP34.25■■■■□ 3.07
LMNB2-204ENST00000527409 NCKAP5LQ9HCH0 1330 aa34.24■■■■□ 3.07
LMNB2-204ENST00000527409 THEMISQ8N1K5 641 aaPredicted RBP34.23■■■■□ 3.07
LMNB2-204ENST00000527409 TET3O43151 1660 aa34.22■■■■□ 3.07
LMNB2-204ENST00000527409 GCC2Q8IWJ2 1684 aa34.19■■■■□ 3.06
LMNB2-204ENST00000527409 UBR1Q8IWV7 1749 aa34.18■■■■□ 3.06
LMNB2-204ENST00000527409 RPRD2Q5VT52 1461 aaKnown RBP34.18■■■■□ 3.06
LMNB2-204ENST00000527409 IQGAP3Q86VI3 1631 aa34.16■■■■□ 3.06
LMNB2-204ENST00000527409 ILDR1Q86SU0 546 aaPredicted RBP34.14■■■■□ 3.06
LMNB2-204ENST00000527409 NEURL4Q96JN8 1562 aa34.14■■■■□ 3.06
LMNB2-204ENST00000527409 NOS1P29475 1434 aa34.13■■■■□ 3.05
LMNB2-204ENST00000527409 SYNMO15061 1565 aa34.12■■■■□ 3.05
LMNB2-204ENST00000527409 ANKLE2Q86XL3 938 aa34.12■■■■□ 3.05
LMNB2-204ENST00000527409 PIK3C2BO00750 1634 aa34.12■■■■□ 3.05
LMNB2-204ENST00000527409 CERKQ8TCT0 537 aa34.11■■■■□ 3.05
LMNB2-204ENST00000527409 KDM5AP29375 1690 aaKnown RBP34.1■■■■□ 3.05
LMNB2-204ENST00000527409 FBXO41Q8TF61 875 aa34.08■■■■□ 3.05
LMNB2-204ENST00000527409 NUP155O75694 1391 aa34.07■■■■□ 3.04
LMNB2-204ENST00000527409 LTBP4Q8N2S1 1624 aa34.07■■■■□ 3.04
LMNB2-204ENST00000527409 NAIPQ13075 1403 aa34.06■■■■□ 3.04
LMNB2-204ENST00000527409 MED14O60244 1454 aa34.06■■■■□ 3.04
LMNB2-204ENST00000527409 E9PCH4 1651 aa34.06■■■■□ 3.04
LMNB2-204ENST00000527409 SLIT1O75093 1534 aa34.03■■■■□ 3.04
LMNB2-204ENST00000527409 HFM1A2PYH4 1435 aa34.02■■■■□ 3.04
LMNB2-204ENST00000527409 ARHGAP23Q9P227 1491 aa34.01■■■■□ 3.04
LMNB2-204ENST00000527409 IQGAP1P46940 1657 aa34■■■■□ 3.03
LMNB2-204ENST00000527409 NPHP4O75161 1426 aaPredicted RBP34■■■■□ 3.03
LMNB2-204ENST00000527409 IDI1Q13907 227 aa34■■■■□ 3.03
LMNB2-204ENST00000527409 SLC52A1Q9NWF4 448 aa34■■■■□ 3.03
LMNB2-204ENST00000527409 STAG3Q9UJ98 1225 aa33.99■■■■□ 3.03
LMNB2-204ENST00000527409 ADGRB3O60242 1522 aa33.99■■■■□ 3.03
LMNB2-204ENST00000527409 SCAF11Q99590 1463 aaKnown RBP33.97■■■■□ 3.03
LMNB2-204ENST00000527409 ZNF335Q9H4Z2 1342 aaPredicted RBP33.97■■■■□ 3.03
LMNB2-204ENST00000527409 IQSEC2Q5JU85 1478 aa33.94■■■■□ 3.02
LMNB2-204ENST00000527409 TMEM2Q9UHN6 1383 aa33.93■■■■□ 3.02
LMNB2-204ENST00000527409 EID1Q9Y6B2 187 aa33.9■■■■□ 3.02
LMNB2-204ENST00000527409 TXNDC2Q86VQ3 553 aa33.89■■■■□ 3.02
LMNB2-204ENST00000527409 LTKP29376 864 aa33.86■■■■□ 3.01
LMNB2-204ENST00000527409 SPHKAPQ2M3C7 1700 aa33.86■■■■□ 3.01
LMNB2-204ENST00000527409 TMEM131LA2VDJ0 1609 aa33.86■■■■□ 3.01
LMNB2-204ENST00000527409 MYO5BQ9ULV0 1848 aa33.86■■■■□ 3.01
LMNB2-204ENST00000527409 CPS1P31327 1500 aa33.84■■■■□ 3.01
LMNB2-204ENST00000527409 TRIM52Q96A61 297 aa33.77■■■■□ 3
LMNB2-204ENST00000527409 ZFYVE9O95405 1425 aa33.74■■■□□ 2.99
LMNB2-204ENST00000527409 STRCP1A6NGW2 1772 aa33.71■■■□□ 2.99
LMNB2-204ENST00000527409 TRPM2O94759 1503 aa33.71■■■□□ 2.99
LMNB2-204ENST00000527409 CHGAP10645 457 aaKnown RBP33.71■■■□□ 2.99
LMNB2-204ENST00000527409 RIMS2Q9UQ26 1411 aa33.7■■■□□ 2.99
LMNB2-204ENST00000527409 HDGFP51858 240 aaKnown RBP33.7■■■□□ 2.99
LMNB2-204ENST00000527409 SLC4A1APQ9BWU0 796 aaKnown RBP33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms