RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 CDC42BPBQ9Y5S2 1711 aa24.39■■□□□ 1.49
PCDHB18P-201ENST00000524813 PKD2Q13563 968 aa24.37■■□□□ 1.49
PCDHB18P-201ENST00000524813 LRPPRCP42704 1394 aaKnown RBP24.36■■□□□ 1.49
PCDHB18P-201ENST00000524813 KIF15Q9NS87 1388 aa24.36■■□□□ 1.49
PCDHB18P-201ENST00000524813 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
PCDHB18P-201ENST00000524813 RRP1P56182 461 aaKnown RBP24.35■■□□□ 1.49
PCDHB18P-201ENST00000524813 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
PCDHB18P-201ENST00000524813 EXOC6Q8TAG9 804 aa24.32■■□□□ 1.48
PCDHB18P-201ENST00000524813 NPM2Q86SE8 214 aaKnown RBP24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 CARD11Q9BXL7 1154 aa24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 BRD4O60885 1362 aaPredicted RBP24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 MYBBP1AQ9BQG0 1328 aaKnown RBP24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 UHRF1BP1Q6BDS2 1440 aa24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 RALGAPBQ86X10 1494 aa24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
PCDHB18P-201ENST00000524813 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
PCDHB18P-201ENST00000524813 SAMD9LQ8IVG5 1584 aa24.3■■□□□ 1.48
PCDHB18P-201ENST00000524813 TCERG1O14776 1098 aaKnown RBP24.29■■□□□ 1.48
PCDHB18P-201ENST00000524813 RALBP1Q15311 655 aa24.28■■□□□ 1.48
PCDHB18P-201ENST00000524813 RCAN3Q9UKA8 241 aa24.28■■□□□ 1.48
PCDHB18P-201ENST00000524813 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
PCDHB18P-201ENST00000524813 ADGRL2O95490 1459 aa24.26■■□□□ 1.47
PCDHB18P-201ENST00000524813 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
PCDHB18P-201ENST00000524813 ST20-MTHFSA0A0A6YYL1 179 aa24.25■■□□□ 1.47
PCDHB18P-201ENST00000524813 PDE4AP27815 886 aa24.25■■□□□ 1.47
PCDHB18P-201ENST00000524813 ANKRD30AQ9BXX3 1397 aa24.23■■□□□ 1.47
PCDHB18P-201ENST00000524813 SALL2Q9Y467 1007 aaPredicted RBP24.23■■□□□ 1.47
PCDHB18P-201ENST00000524813 ASXL2Q76L83 1435 aa24.22■■□□□ 1.47
PCDHB18P-201ENST00000524813 HNRNPMP52272 730 aaKnown RBP eCLIP24.22■■□□□ 1.47
PCDHB18P-201ENST00000524813 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
PCDHB18P-201ENST00000524813 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
PCDHB18P-201ENST00000524813 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
PCDHB18P-201ENST00000524813 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
PCDHB18P-201ENST00000524813 KDM2AQ9Y2K7 1162 aa24.21■■□□□ 1.47
PCDHB18P-201ENST00000524813 ANKRD50Q9ULJ7 1429 aa24.2■■□□□ 1.47
PCDHB18P-201ENST00000524813 BACH2Q9BYV9 841 aa24.2■■□□□ 1.46
PCDHB18P-201ENST00000524813 ARHGEF12Q9NZN5 1544 aa24.19■■□□□ 1.46
PCDHB18P-201ENST00000524813 NPM1P06748 294 aaKnown RBP eCLIP24.19■■□□□ 1.46
PCDHB18P-201ENST00000524813 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
PCDHB18P-201ENST00000524813 MS4A1P11836 297 aa24.18■■□□□ 1.46
PCDHB18P-201ENST00000524813 NUP155O75694 1391 aa24.18■■□□□ 1.46
PCDHB18P-201ENST00000524813 ARHGEF5Q12774 1597 aa24.18■■□□□ 1.46
PCDHB18P-201ENST00000524813 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
PCDHB18P-201ENST00000524813 E9PCH4 1651 aa24.17■■□□□ 1.46
PCDHB18P-201ENST00000524813 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
PCDHB18P-201ENST00000524813 PLCH2O75038 1416 aa24.16■■□□□ 1.46
PCDHB18P-201ENST00000524813 NEFMP07197 916 aa24.15■■□□□ 1.46
PCDHB18P-201ENST00000524813 NLRP13Q86W25 1043 aa24.15■■□□□ 1.46
PCDHB18P-201ENST00000524813 CCDC141Q6ZP82 1450 aa24.15■■□□□ 1.46
PCDHB18P-201ENST00000524813 SHANK2Q9UPX8 1470 aa24.15■■□□□ 1.46
PCDHB18P-201ENST00000524813 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.46
PCDHB18P-201ENST00000524813 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
PCDHB18P-201ENST00000524813 ABCA9Q8IUA7 1624 aa24.14■■□□□ 1.45
PCDHB18P-201ENST00000524813 USP35Q9P2H5 1018 aa24.13■■□□□ 1.45
PCDHB18P-201ENST00000524813 CDCA7LQ96GN5 454 aa24.12■■□□□ 1.45
PCDHB18P-201ENST00000524813 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
PCDHB18P-201ENST00000524813 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
PCDHB18P-201ENST00000524813 PARD3Q8TEW0 1356 aa24.11■■□□□ 1.45
PCDHB18P-201ENST00000524813 IL27Q8NEV9 243 aa24.1■■□□□ 1.45
PCDHB18P-201ENST00000524813 ABCC1P33527 1531 aa24.08■■□□□ 1.45
PCDHB18P-201ENST00000524813 EFCAB2Q5VUJ9 269 aa24.08■■□□□ 1.45
PCDHB18P-201ENST00000524813 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
PCDHB18P-201ENST00000524813 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
PCDHB18P-201ENST00000524813 PLIN1O60240 522 aa24.07■■□□□ 1.44
PCDHB18P-201ENST00000524813 ARAP3Q8WWN8 1544 aa24.04■■□□□ 1.44
PCDHB18P-201ENST00000524813 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
PCDHB18P-201ENST00000524813 FANCAO15360 1455 aa24.03■■□□□ 1.44
PCDHB18P-201ENST00000524813 SKAP1Q86WV1 359 aa24.03■■□□□ 1.44
PCDHB18P-201ENST00000524813 CRBNQ96SW2 442 aa24.03■■□□□ 1.44
PCDHB18P-201ENST00000524813 ANO8Q9HCE9 1232 aaPredicted RBP24.03■■□□□ 1.44
PCDHB18P-201ENST00000524813 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
PCDHB18P-201ENST00000524813 RSPH4AQ5TD94 716 aa24■■□□□ 1.43
PCDHB18P-201ENST00000524813 MAST1Q9Y2H9 1570 aa24■■□□□ 1.43
PCDHB18P-201ENST00000524813 DDRGK1Q96HY6 314 aa24■■□□□ 1.43
PCDHB18P-201ENST00000524813 TRAPPC8Q9Y2L5 1435 aa23.99■■□□□ 1.43
PCDHB18P-201ENST00000524813 RTN4Q9NQC3 1192 aaKnown RBP23.99■■□□□ 1.43
PCDHB18P-201ENST00000524813 WASHC2CQ9Y4E1 1318 aa23.99■■□□□ 1.43
PCDHB18P-201ENST00000524813 CC2D1BQ5T0F9 858 aaKnown RBP23.98■■□□□ 1.43
PCDHB18P-201ENST00000524813 BLMP54132 1417 aaPredicted RBP23.98■■□□□ 1.43
PCDHB18P-201ENST00000524813 PRAG1Q86YV5 1406 aa23.96■■□□□ 1.43
PCDHB18P-201ENST00000524813 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.43
PCDHB18P-201ENST00000524813 INSRP06213 1382 aa23.95■■□□□ 1.42
PCDHB18P-201ENST00000524813 NBPF1Q3BBV0 1214 aa23.94■■□□□ 1.42
PCDHB18P-201ENST00000524813 PLXNC1O60486 1568 aa23.94■■□□□ 1.42
PCDHB18P-201ENST00000524813 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
PCDHB18P-201ENST00000524813 CD109Q6YHK3 1445 aa23.93■■□□□ 1.42
PCDHB18P-201ENST00000524813 ZMYM4Q5VZL5 1548 aa23.92■■□□□ 1.42
PCDHB18P-201ENST00000524813 AFAP1Q8N556 730 aa23.92■■□□□ 1.42
PCDHB18P-201ENST00000524813 C20orf194Q5TEA3 1177 aa23.91■■□□□ 1.42
PCDHB18P-201ENST00000524813 COL17A1Q9UMD9 1497 aaPredicted RBP23.91■■□□□ 1.42
PCDHB18P-201ENST00000524813 PRKCSHP14314 528 aaPredicted RBP23.9■■□□□ 1.42
PCDHB18P-201ENST00000524813 PANK3Q9H999 370 aa23.9■■□□□ 1.42
PCDHB18P-201ENST00000524813 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
PCDHB18P-201ENST00000524813 RGL3Q3MIN7 710 aa23.89■■□□□ 1.42
PCDHB18P-201ENST00000524813 SCAPERQ9BY12 1400 aa23.89■■□□□ 1.42
PCDHB18P-201ENST00000524813 FAM135AQ9P2D6 1515 aa23.88■■□□□ 1.41
PCDHB18P-201ENST00000524813 CCDC144AA2RUR9 1427 aa23.88■■□□□ 1.41
PCDHB18P-201ENST00000524813 ZFYVE16Q7Z3T8 1539 aa23.88■■□□□ 1.41
PCDHB18P-201ENST00000524813 KDM2BQ8NHM5 1336 aa23.88■■□□□ 1.41
PCDHB18P-201ENST00000524813 GPRASP1Q5JY77 1395 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms