RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
PCDHB18P-201ENST00000524813 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
PCDHB18P-201ENST00000524813 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
PCDHB18P-201ENST00000524813 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
PCDHB18P-201ENST00000524813 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
PCDHB18P-201ENST00000524813 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
PCDHB18P-201ENST00000524813 ABCC9O60706 1549 aa30.75■■■□□ 2.51
PCDHB18P-201ENST00000524813 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
PCDHB18P-201ENST00000524813 HRCP23327 699 aa30.46■■■□□ 2.47
PCDHB18P-201ENST00000524813 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
PCDHB18P-201ENST00000524813 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
PCDHB18P-201ENST00000524813 NACADO15069 1562 aa30.12■■■□□ 2.41
PCDHB18P-201ENST00000524813 PCGF6Q9BYE7 350 aa30.06■■■□□ 2.4
PCDHB18P-201ENST00000524813 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
PCDHB18P-201ENST00000524813 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
PCDHB18P-201ENST00000524813 PPARGC1BQ86YN6 1023 aaKnown RBP29.78■■■□□ 2.36
PCDHB18P-201ENST00000524813 LOC105371045A0A1W2PR82 267 aa29.52■■■□□ 2.32
PCDHB18P-201ENST00000524813 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
PCDHB18P-201ENST00000524813 TRIM26Q12899 539 aaPredicted RBP29.3■■■□□ 2.28
PCDHB18P-201ENST00000524813 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
PCDHB18P-201ENST00000524813 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
PCDHB18P-201ENST00000524813 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
PCDHB18P-201ENST00000524813 ZEB1P37275 1124 aaPredicted RBP28.91■■■□□ 2.22
PCDHB18P-201ENST00000524813 RSF1Q96T23 1441 aaPredicted RBP28.89■■■□□ 2.21
PCDHB18P-201ENST00000524813 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
PCDHB18P-201ENST00000524813 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
PCDHB18P-201ENST00000524813 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
PCDHB18P-201ENST00000524813 WIZO95785 1651 aa28.64■■■□□ 2.17
PCDHB18P-201ENST00000524813 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
PCDHB18P-201ENST00000524813 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
PCDHB18P-201ENST00000524813 PELP1Q8IZL8 1130 aaKnown RBP28.57■■■□□ 2.16
PCDHB18P-201ENST00000524813 SCAF1Q9H7N4 1312 aaKnown RBP28.48■■■□□ 2.15
PCDHB18P-201ENST00000524813 EHMT2Q96KQ7 1210 aa28.39■■■□□ 2.14
PCDHB18P-201ENST00000524813 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
PCDHB18P-201ENST00000524813 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
PCDHB18P-201ENST00000524813 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
PCDHB18P-201ENST00000524813 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
PCDHB18P-201ENST00000524813 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
PCDHB18P-201ENST00000524813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
PCDHB18P-201ENST00000524813 CCER1Q8TC90 406 aaPredicted RBP28.01■■■□□ 2.07
PCDHB18P-201ENST00000524813 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
PCDHB18P-201ENST00000524813 ACIN1Q9UKV3 1341 aaKnown RBP27.98■■■□□ 2.07
PCDHB18P-201ENST00000524813 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
PCDHB18P-201ENST00000524813 NEUROD1Q13562 356 aa27.9■■■□□ 2.06
PCDHB18P-201ENST00000524813 DIEXFQ68CQ4 756 aaKnown RBP27.79■■■□□ 2.04
PCDHB18P-201ENST00000524813 HMGXB3Q12766 1538 aa27.79■■■□□ 2.04
PCDHB18P-201ENST00000524813 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
PCDHB18P-201ENST00000524813 NCAPD3P42695 1498 aa27.78■■■□□ 2.04
PCDHB18P-201ENST00000524813 CENPBP07199 599 aaPredicted RBP27.71■■■□□ 2.03
PCDHB18P-201ENST00000524813 GTF3C3Q9Y5Q9 886 aa27.69■■■□□ 2.02
PCDHB18P-201ENST00000524813 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
PCDHB18P-201ENST00000524813 TTBK1Q5TCY1 1321 aaPredicted RBP27.63■■■□□ 2.01
PCDHB18P-201ENST00000524813 CEP162Q5TB80 1403 aa27.57■■■□□ 2
PCDHB18P-201ENST00000524813 ABCC8Q09428 1581 aa27.56■■■□□ 2
PCDHB18P-201ENST00000524813 TNIKQ9UKE5 1360 aa27.46■■□□□ 1.99
PCDHB18P-201ENST00000524813 SOGA1O94964 1423 aa27.43■■□□□ 1.98
PCDHB18P-201ENST00000524813 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
PCDHB18P-201ENST00000524813 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
PCDHB18P-201ENST00000524813 UBTFP17480 764 aaKnown RBP27.3■■□□□ 1.96
PCDHB18P-201ENST00000524813 EEA1Q15075 1411 aa27.3■■□□□ 1.96
PCDHB18P-201ENST00000524813 MYT1Q01538 1121 aa27.29■■□□□ 1.96
PCDHB18P-201ENST00000524813 RUSC2Q8N2Y8 1516 aa27.27■■□□□ 1.96
PCDHB18P-201ENST00000524813 YTHDC1Q96MU7 727 aaKnown RBP27.22■■□□□ 1.95
PCDHB18P-201ENST00000524813 CFTRP13569 1480 aa27.22■■□□□ 1.95
PCDHB18P-201ENST00000524813 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
PCDHB18P-201ENST00000524813 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
PCDHB18P-201ENST00000524813 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
PCDHB18P-201ENST00000524813 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
PCDHB18P-201ENST00000524813 MIER1Q8N108 512 aa27.13■■□□□ 1.93
PCDHB18P-201ENST00000524813 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
PCDHB18P-201ENST00000524813 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
PCDHB18P-201ENST00000524813 NESP48681 1621 aa27.02■■□□□ 1.92
PCDHB18P-201ENST00000524813 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
PCDHB18P-201ENST00000524813 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
PCDHB18P-201ENST00000524813 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.9
PCDHB18P-201ENST00000524813 CUX1P39880 1505 aa26.93■■□□□ 1.9
PCDHB18P-201ENST00000524813 CLIP1P30622 1438 aa26.92■■□□□ 1.9
PCDHB18P-201ENST00000524813 KIF21BO75037 1637 aa26.91■■□□□ 1.9
PCDHB18P-201ENST00000524813 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.89
PCDHB18P-201ENST00000524813 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
PCDHB18P-201ENST00000524813 VPS8Q8N3P4 1428 aa26.87■■□□□ 1.89
PCDHB18P-201ENST00000524813 APLP2Q06481 763 aa26.82■■□□□ 1.88
PCDHB18P-201ENST00000524813 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
PCDHB18P-201ENST00000524813 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
PCDHB18P-201ENST00000524813 RANGAP1P46060 587 aaPredicted RBP26.66■■□□□ 1.86
PCDHB18P-201ENST00000524813 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
PCDHB18P-201ENST00000524813 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.85
PCDHB18P-201ENST00000524813 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
PCDHB18P-201ENST00000524813 CLSPNQ9HAW4 1339 aa26.62■■□□□ 1.85
PCDHB18P-201ENST00000524813 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
PCDHB18P-201ENST00000524813 DHX57Q6P158 1386 aaKnown RBP26.6■■□□□ 1.85
PCDHB18P-201ENST00000524813 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
PCDHB18P-201ENST00000524813 SUPT16HQ9Y5B9 1047 aaKnown RBP26.51■■□□□ 1.84
PCDHB18P-201ENST00000524813 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
PCDHB18P-201ENST00000524813 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
PCDHB18P-201ENST00000524813 CUX2O14529 1486 aa26.48■■□□□ 1.83
PCDHB18P-201ENST00000524813 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
PCDHB18P-201ENST00000524813 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
PCDHB18P-201ENST00000524813 KANK4Q5T7N3 995 aaPredicted RBP26.41■■□□□ 1.82
PCDHB18P-201ENST00000524813 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 272.9 ms