RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
PCM1-218ENST00000523055 TOM1O60784 492 aa24.01■■□□□ 1.43
PCM1-218ENST00000523055 CFDP1Q9UEE9 299 aaPredicted RBP24.01■■□□□ 1.43
PCM1-218ENST00000523055 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
PCM1-218ENST00000523055 FBXO31Q5XUX0 539 aaPredicted RBP23.99■■□□□ 1.43
PCM1-218ENST00000523055 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
PCM1-218ENST00000523055 POLR1AO95602 1720 aaPredicted RBP23.99■■□□□ 1.43
PCM1-218ENST00000523055 MBD5Q9P267 1494 aa23.97■■□□□ 1.43
PCM1-218ENST00000523055 VWDEQ8N2E2 1590 aa23.97■■□□□ 1.43
PCM1-218ENST00000523055 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
PCM1-218ENST00000523055 CCNB3Q8WWL7 1395 aa23.95■■□□□ 1.42
PCM1-218ENST00000523055 TNRQ92752 1358 aa23.94■■□□□ 1.42
PCM1-218ENST00000523055 DHX29Q7Z478 1369 aaKnown RBP23.93■■□□□ 1.42
PCM1-218ENST00000523055 PZPP20742 1482 aa23.91■■□□□ 1.42
PCM1-218ENST00000523055 RTEL1-TNFRSF6BF6WH68 1400 aa23.91■■□□□ 1.42
PCM1-218ENST00000523055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.42
PCM1-218ENST00000523055 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
PCM1-218ENST00000523055 MED14O60244 1454 aa23.89■■□□□ 1.42
PCM1-218ENST00000523055 LRRC9Q6ZRR7 1453 aa23.88■■□□□ 1.41
PCM1-218ENST00000523055 ANKLE2Q86XL3 938 aa23.87■■□□□ 1.41
PCM1-218ENST00000523055 NPHP4O75161 1426 aaPredicted RBP23.86■■□□□ 1.41
PCM1-218ENST00000523055 KDM5DQ9BY66 1539 aa23.86■■□□□ 1.41
PCM1-218ENST00000523055 MIA2Q96PC5 1412 aa23.85■■□□□ 1.41
PCM1-218ENST00000523055 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
PCM1-218ENST00000523055 DEPDC5O75140 1603 aa23.85■■□□□ 1.41
PCM1-218ENST00000523055 KIF3BO15066 747 aa23.84■■□□□ 1.41
PCM1-218ENST00000523055 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
PCM1-218ENST00000523055 STRCP1A6NGW2 1772 aa23.84■■□□□ 1.41
PCM1-218ENST00000523055 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
PCM1-218ENST00000523055 KANK4Q5T7N3 995 aaPredicted RBP23.83■■□□□ 1.4
PCM1-218ENST00000523055 THEMISQ8N1K5 641 aaPredicted RBP23.83■■□□□ 1.4
PCM1-218ENST00000523055 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
PCM1-218ENST00000523055 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
PCM1-218ENST00000523055 LRRC7Q96NW7 1537 aa23.81■■□□□ 1.4
PCM1-218ENST00000523055 RGS17Q9UGC6 210 aaPredicted RBP23.8■■□□□ 1.4
PCM1-218ENST00000523055 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
PCM1-218ENST00000523055 IQGAP1P46940 1657 aa23.78■■□□□ 1.4
PCM1-218ENST00000523055 CAMSAP2Q08AD1 1489 aa23.76■■□□□ 1.39
PCM1-218ENST00000523055 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
PCM1-218ENST00000523055 CCDC141Q6ZP82 1450 aa23.74■■□□□ 1.39
PCM1-218ENST00000523055 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
PCM1-218ENST00000523055 SYNMO15061 1565 aa23.71■■□□□ 1.39
PCM1-218ENST00000523055 ZC3H13Q5T200 1668 aaKnown RBP23.69■■□□□ 1.38
PCM1-218ENST00000523055 ABCC3O15438 1527 aa23.66■■□□□ 1.38
PCM1-218ENST00000523055 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
PCM1-218ENST00000523055 MYOM3Q5VTT5 1437 aa23.66■■□□□ 1.38
PCM1-218ENST00000523055 APLP2Q06481 763 aa23.65■■□□□ 1.38
PCM1-218ENST00000523055 ERVK-7P63135 1459 aa23.64■■□□□ 1.38
PCM1-218ENST00000523055 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.38
PCM1-218ENST00000523055 XIRP1Q702N8 1843 aaKnown RBP23.63■■□□□ 1.37
PCM1-218ENST00000523055 LTKP29376 864 aa23.6■■□□□ 1.37
PCM1-218ENST00000523055 UBR1Q8IWV7 1749 aa23.6■■□□□ 1.37
PCM1-218ENST00000523055 MROH1Q8NDA8 1641 aa23.6■■□□□ 1.37
PCM1-218ENST00000523055 POTEAQ6S8J7 498 aa23.59■■□□□ 1.37
PCM1-218ENST00000523055 SCAF11Q99590 1463 aaKnown RBP23.59■■□□□ 1.37
PCM1-218ENST00000523055 ARHGAP23Q9P227 1491 aa23.59■■□□□ 1.37
PCM1-218ENST00000523055 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.37
PCM1-218ENST00000523055 FAM135BQ49AJ0 1406 aa23.56■■□□□ 1.36
PCM1-218ENST00000523055 SLIT1O75093 1534 aa23.56■■□□□ 1.36
PCM1-218ENST00000523055 CROCC2H7BZ55 1655 aa23.55■■□□□ 1.36
PCM1-218ENST00000523055 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
PCM1-218ENST00000523055 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
PCM1-218ENST00000523055 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
PCM1-218ENST00000523055 MAST1Q9Y2H9 1570 aa23.53■■□□□ 1.36
PCM1-218ENST00000523055 TXNDC2Q86VQ3 553 aa23.51■■□□□ 1.35
PCM1-218ENST00000523055 FGD6Q6ZV73 1430 aa23.51■■□□□ 1.35
PCM1-218ENST00000523055 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
PCM1-218ENST00000523055 CEP152O94986 1710 aa23.5■■□□□ 1.35
PCM1-218ENST00000523055 ARHGAP31Q2M1Z3 1444 aa23.46■■□□□ 1.35
PCM1-218ENST00000523055 TMEM94Q12767 1356 aa23.45■■□□□ 1.35
PCM1-218ENST00000523055 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
PCM1-218ENST00000523055 ABCC5O15440 1437 aa23.42■■□□□ 1.34
PCM1-218ENST00000523055 ROBO1Q9Y6N7 1651 aa23.42■■□□□ 1.34
PCM1-218ENST00000523055 DAPK1P53355 1430 aa23.41■■□□□ 1.34
PCM1-218ENST00000523055 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
PCM1-218ENST00000523055 EID1Q9Y6B2 187 aa23.4■■□□□ 1.34
PCM1-218ENST00000523055 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.34
PCM1-218ENST00000523055 SETD1AO15047 1707 aaKnown RBP23.39■■□□□ 1.34
PCM1-218ENST00000523055 KCNA6P17658 529 aa23.39■■□□□ 1.33
PCM1-218ENST00000523055 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
PCM1-218ENST00000523055 RBM33Q96EV2 1170 aaKnown RBP23.39■■□□□ 1.33
PCM1-218ENST00000523055 TET3O43151 1660 aa23.39■■□□□ 1.33
PCM1-218ENST00000523055 DUOX2Q9NRD8 1548 aa23.38■■□□□ 1.33
PCM1-218ENST00000523055 SLC26A8Q96RN1 970 aa23.33■■□□□ 1.33
PCM1-218ENST00000523055 EFCAB6Q5THR3 1501 aa23.32■■□□□ 1.32
PCM1-218ENST00000523055 IDI1Q13907 227 aa23.32■■□□□ 1.32
PCM1-218ENST00000523055 PROSER2Q86WR7 435 aaPredicted RBP23.32■■□□□ 1.32
PCM1-218ENST00000523055 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
PCM1-218ENST00000523055 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
PCM1-218ENST00000523055 KIF15Q9NS87 1388 aa23.31■■□□□ 1.32
PCM1-218ENST00000523055 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
PCM1-218ENST00000523055 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
PCM1-218ENST00000523055 CHIC2Q9UKJ5 165 aa23.29■■□□□ 1.32
PCM1-218ENST00000523055 NKTRP30414 1462 aaKnown RBP23.29■■□□□ 1.32
PCM1-218ENST00000523055 RRP7BPQ9NSQ0 103 aa23.27■■□□□ 1.32
PCM1-218ENST00000523055 JCADQ9P266 1359 aa23.27■■□□□ 1.32
PCM1-218ENST00000523055 SLAIN2Q9P270 581 aa23.26■■□□□ 1.31
PCM1-218ENST00000523055 STAG3Q9UJ98 1225 aa23.26■■□□□ 1.31
PCM1-218ENST00000523055 PHLPP1O60346 1717 aa23.26■■□□□ 1.31
PCM1-218ENST00000523055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.311e-6■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms