RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
PVT1-213ENST00000522414 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
PVT1-213ENST00000522414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.69□□□□□ -0.22
PVT1-213ENST00000522414 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
PVT1-213ENST00000522414 GPR153Q6NV75 609 aa13.69□□□□□ -0.22
PVT1-213ENST00000522414 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
PVT1-213ENST00000522414 CARMIL2Q6F5E8 1435 aa13.69□□□□□ -0.22
PVT1-213ENST00000522414 DISP1Q96F81 1524 aa13.69□□□□□ -0.22
PVT1-213ENST00000522414 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
PVT1-213ENST00000522414 SOX12O15370 315 aa13.68□□□□□ -0.22
PVT1-213ENST00000522414 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
PVT1-213ENST00000522414 RIOK3O14730 519 aaKnown RBP13.67□□□□□ -0.22
PVT1-213ENST00000522414 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
PVT1-213ENST00000522414 RNF166Q96A37 237 aaPredicted RBP13.65□□□□□ -0.22
PVT1-213ENST00000522414 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
PVT1-213ENST00000522414 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
PVT1-213ENST00000522414 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
PVT1-213ENST00000522414 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
PVT1-213ENST00000522414 ZNF687Q8N1G0 1237 aa13.63□□□□□ -0.23
PVT1-213ENST00000522414 KIAA0556O60303 1618 aa13.63□□□□□ -0.23
PVT1-213ENST00000522414 UACAQ9BZF9 1416 aa13.61□□□□□ -0.23
PVT1-213ENST00000522414 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
PVT1-213ENST00000522414 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
PVT1-213ENST00000522414 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
PVT1-213ENST00000522414 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
PVT1-213ENST00000522414 GLI2P10070 1586 aa13.59□□□□□ -0.23
PVT1-213ENST00000522414 ARSIQ5FYB1 569 aa13.58□□□□□ -0.24
PVT1-213ENST00000522414 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
PVT1-213ENST00000522414 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
PVT1-213ENST00000522414 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
PVT1-213ENST00000522414 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
PVT1-213ENST00000522414 KDM4FA0A1W2PPD8 638 aa13.55□□□□□ -0.24
PVT1-213ENST00000522414 PPRC1Q5VV67 1664 aaKnown RBP13.55□□□□□ -0.24
PVT1-213ENST00000522414 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
PVT1-213ENST00000522414 KCNH8Q96L42 1107 aa13.54□□□□□ -0.24
PVT1-213ENST00000522414 ZCCHC11Q5TAX3 1644 aaKnown RBP13.53□□□□□ -0.24
PVT1-213ENST00000522414 ARID3CA6NKF2 412 aa13.52□□□□□ -0.25
PVT1-213ENST00000522414 GOLGA3Q08378 1498 aa13.52□□□□□ -0.25
PVT1-213ENST00000522414 ABCA8O94911 1581 aa13.52□□□□□ -0.25
PVT1-213ENST00000522414 KDM6BO15054 1643 aa13.51□□□□□ -0.25
PVT1-213ENST00000522414 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
PVT1-213ENST00000522414 FAM9AQ8IZU1 332 aaPredicted RBP13.5□□□□□ -0.25
PVT1-213ENST00000522414 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
PVT1-213ENST00000522414 RANGAP1P46060 587 aaPredicted RBP13.49□□□□□ -0.25
PVT1-213ENST00000522414 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
PVT1-213ENST00000522414 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
PVT1-213ENST00000522414 EEA1Q15075 1411 aa13.48□□□□□ -0.25
PVT1-213ENST00000522414 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
PVT1-213ENST00000522414 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
PVT1-213ENST00000522414 NLRP6P59044 892 aa13.47□□□□□ -0.25
PVT1-213ENST00000522414 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
PVT1-213ENST00000522414 MFRPQ9BY79 579 aa13.45□□□□□ -0.26
PVT1-213ENST00000522414 WDR7Q9Y4E6 1490 aa13.44□□□□□ -0.26
PVT1-213ENST00000522414 KIF3CO14782 793 aa13.44□□□□□ -0.26
PVT1-213ENST00000522414 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
PVT1-213ENST00000522414 PTGER2P43116 358 aa13.41□□□□□ -0.26
PVT1-213ENST00000522414 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
PVT1-213ENST00000522414 KIF21BO75037 1637 aa13.4□□□□□ -0.26
PVT1-213ENST00000522414 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
PVT1-213ENST00000522414 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
PVT1-213ENST00000522414 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
PVT1-213ENST00000522414 ATP10BO94823 1461 aa13.39□□□□□ -0.27
PVT1-213ENST00000522414 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
PVT1-213ENST00000522414 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
PVT1-213ENST00000522414 NUDT7P0C024 238 aa13.38□□□□□ -0.27
PVT1-213ENST00000522414 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
PVT1-213ENST00000522414 RAPGEF6Q8TEU7 1601 aa13.35□□□□□ -0.27
PVT1-213ENST00000522414 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
PVT1-213ENST00000522414 ABCA9Q8IUA7 1624 aa13.33□□□□□ -0.28
PVT1-213ENST00000522414 LHX6Q9UPM6 363 aa13.33□□□□□ -0.28
PVT1-213ENST00000522414 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
PVT1-213ENST00000522414 STK25O00506 426 aa13.32□□□□□ -0.28
PVT1-213ENST00000522414 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
PVT1-213ENST00000522414 NUP153P49790 1475 aaKnown RBP13.31□□□□□ -0.28
PVT1-213ENST00000522414 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
PVT1-213ENST00000522414 RAPGEF3O95398 923 aa13.3□□□□□ -0.28
PVT1-213ENST00000522414 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
PVT1-213ENST00000522414 PCDHGA4Q9Y5G9 962 aa13.3□□□□□ -0.28
PVT1-213ENST00000522414 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
PVT1-213ENST00000522414 TAOK2Q9UL54 1235 aa13.29□□□□□ -0.28
PVT1-213ENST00000522414 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
PVT1-213ENST00000522414 SLC34A2O95436 690 aa13.28□□□□□ -0.28
PVT1-213ENST00000522414 PBX2P40425 430 aa13.26□□□□□ -0.29
PVT1-213ENST00000522414 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
PVT1-213ENST00000522414 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
PVT1-213ENST00000522414 NEO1Q92859 1461 aa13.23□□□□□ -0.29
PVT1-213ENST00000522414 PPP1R37O75864 691 aa13.22□□□□□ -0.29
PVT1-213ENST00000522414 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
PVT1-213ENST00000522414 RGL2O15211 777 aa13.21□□□□□ -0.29
PVT1-213ENST00000522414 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
PVT1-213ENST00000522414 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
PVT1-213ENST00000522414 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
PVT1-213ENST00000522414 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
PVT1-213ENST00000522414 PKD2Q13563 968 aa13.17□□□□□ -0.3
PVT1-213ENST00000522414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.16□□□□□ -0.3
PVT1-213ENST00000522414 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
PVT1-213ENST00000522414 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
PVT1-213ENST00000522414 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
PVT1-213ENST00000522414 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
PVT1-213ENST00000522414 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms