RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
CLK4-209ENST00000521621 CLTCQ00610 1675 aaKnown RBP14.62□□□□□ -0.07
CLK4-209ENST00000521621 VWDEQ8N2E2 1590 aa14.62□□□□□ -0.07
CLK4-209ENST00000521621 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
CLK4-209ENST00000521621 MYT1LQ9UL68 1186 aa14.61□□□□□ -0.07
CLK4-209ENST00000521621 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
CLK4-209ENST00000521621 ZNF142P52746 1687 aaPredicted RBP14.59□□□□□ -0.07
CLK4-209ENST00000521621 UNC13BO14795 1591 aa14.58□□□□□ -0.08
CLK4-209ENST00000521621 SETD1BQ9UPS6 1966 aaKnown RBP14.58□□□□□ -0.08
CLK4-209ENST00000521621 ABCC3O15438 1527 aa14.57□□□□□ -0.08
CLK4-209ENST00000521621 LMTK3Q96Q04 1460 aa14.57□□□□□ -0.08
CLK4-209ENST00000521621 PZPP20742 1482 aa14.57□□□□□ -0.08
CLK4-209ENST00000521621 ARHGAP31Q2M1Z3 1444 aa14.57□□□□□ -0.08
CLK4-209ENST00000521621 PTPRKQ15262 1439 aa14.56□□□□□ -0.08
CLK4-209ENST00000521621 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
CLK4-209ENST00000521621 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
CLK4-209ENST00000521621 GCC2Q8IWJ2 1684 aa14.54□□□□□ -0.08
CLK4-209ENST00000521621 SPATA31D1Q6ZQQ2 1576 aa14.53□□□□□ -0.08
CLK4-209ENST00000521621 MYO3AQ8NEV4 1616 aa14.52□□□□□ -0.08
CLK4-209ENST00000521621 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
CLK4-209ENST00000521621 KIF3BO15066 747 aa14.51□□□□□ -0.09
CLK4-209ENST00000521621 MLECQ14165 292 aa14.51□□□□□ -0.09
CLK4-209ENST00000521621 CEP152O94986 1710 aa14.51□□□□□ -0.09
CLK4-209ENST00000521621 KDM5AP29375 1690 aaKnown RBP14.5□□□□□ -0.09
CLK4-209ENST00000521621 ANKRD50Q9ULJ7 1429 aa14.5□□□□□ -0.09
CLK4-209ENST00000521621 IQGAP3Q86VI3 1631 aa14.5□□□□□ -0.09
CLK4-209ENST00000521621 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
CLK4-209ENST00000521621 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
CLK4-209ENST00000521621 TET3O43151 1660 aa14.49□□□□□ -0.09
CLK4-209ENST00000521621 RPRD2Q5VT52 1461 aaKnown RBP14.49□□□□□ -0.09
CLK4-209ENST00000521621 NLRP1Q9C000 1473 aa14.48□□□□□ -0.09
CLK4-209ENST00000521621 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
CLK4-209ENST00000521621 KANK1Q14678 1352 aa14.47□□□□□ -0.09
CLK4-209ENST00000521621 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
CLK4-209ENST00000521621 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
CLK4-209ENST00000521621 GGT6Q6P531 493 aa14.46□□□□□ -0.09
CLK4-209ENST00000521621 CEP170BQ9Y4F5 1589 aaPredicted RBP14.46□□□□□ -0.09
CLK4-209ENST00000521621 A2ML1A8K2U0 1454 aa14.46□□□□□ -0.09
CLK4-209ENST00000521621 RRP7BPQ9NSQ0 103 aa14.46□□□□□ -0.09
CLK4-209ENST00000521621 HFM1A2PYH4 1435 aa14.45□□□□□ -0.1
CLK4-209ENST00000521621 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
CLK4-209ENST00000521621 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
CLK4-209ENST00000521621 NAIPQ13075 1403 aa14.42□□□□□ -0.1
CLK4-209ENST00000521621 TNRQ92752 1358 aa14.42□□□□□ -0.1
CLK4-209ENST00000521621 STRCQ7RTU9 1775 aa14.42□□□□□ -0.1
CLK4-209ENST00000521621 NOS1P29475 1434 aa14.41□□□□□ -0.1
CLK4-209ENST00000521621 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
CLK4-209ENST00000521621 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
CLK4-209ENST00000521621 PTPRTO14522 1441 aa14.4□□□□□ -0.1
CLK4-209ENST00000521621 PIK3C2BO00750 1634 aa14.39□□□□□ -0.11
CLK4-209ENST00000521621 E9PCH4 1651 aa14.38□□□□□ -0.11
CLK4-209ENST00000521621 UBR1Q8IWV7 1749 aa14.38□□□□□ -0.11
CLK4-209ENST00000521621 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
CLK4-209ENST00000521621 SYNMO15061 1565 aa14.37□□□□□ -0.11
CLK4-209ENST00000521621 SLIT1O75093 1534 aa14.35□□□□□ -0.11
CLK4-209ENST00000521621 UGGT1Q9NYU2 1555 aa14.34□□□□□ -0.11
CLK4-209ENST00000521621 MED14O60244 1454 aa14.34□□□□□ -0.11
CLK4-209ENST00000521621 ARHGAP23Q9P227 1491 aa14.34□□□□□ -0.11
CLK4-209ENST00000521621 PPARGC1BQ86YN6 1023 aaKnown RBP14.34□□□□□ -0.11
CLK4-209ENST00000521621 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
CLK4-209ENST00000521621 PKD2Q13563 968 aa14.33□□□□□ -0.12
CLK4-209ENST00000521621 ADGRB3O60242 1522 aa14.32□□□□□ -0.12
CLK4-209ENST00000521621 SPHKAPQ2M3C7 1700 aa14.31□□□□□ -0.12
CLK4-209ENST00000521621 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
CLK4-209ENST00000521621 HRCP23327 699 aa14.3□□□□□ -0.12
CLK4-209ENST00000521621 FBXO31Q5XUX0 539 aaPredicted RBP14.3□□□□□ -0.12
CLK4-209ENST00000521621 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
CLK4-209ENST00000521621 NUP155O75694 1391 aa14.29□□□□□ -0.12
CLK4-209ENST00000521621 TRPM2O94759 1503 aa14.29□□□□□ -0.12
CLK4-209ENST00000521621 THEMISQ8N1K5 641 aaPredicted RBP14.28□□□□□ -0.12
CLK4-209ENST00000521621 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
CLK4-209ENST00000521621 IQSEC2Q5JU85 1478 aa14.27□□□□□ -0.12
CLK4-209ENST00000521621 SETD5Q9C0A6 1442 aa14.26□□□□□ -0.13
CLK4-209ENST00000521621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.133e-8■■■■□ 20.2
CLK4-209ENST00000521621 IQGAP1P46940 1657 aa14.25□□□□□ -0.13
CLK4-209ENST00000521621 HSPA2P54652 639 aa14.24□□□□□ -0.13
CLK4-209ENST00000521621 ITGAEP38570 1179 aa14.23□□□□□ -0.13
CLK4-209ENST00000521621 LTBP4Q8N2S1 1624 aa14.22□□□□□ -0.13
CLK4-209ENST00000521621 SCAF11Q99590 1463 aaKnown RBP14.22□□□□□ -0.13
CLK4-209ENST00000521621 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
CLK4-209ENST00000521621 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
CLK4-209ENST00000521621 CFAP65Q6ZU64 1925 aaKnown RBP14.21□□□□□ -0.13
CLK4-209ENST00000521621 ZFYVE9O95405 1425 aa14.21□□□□□ -0.13
CLK4-209ENST00000521621 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
CLK4-209ENST00000521621 NPHP4O75161 1426 aaPredicted RBP14.2□□□□□ -0.14
CLK4-209ENST00000521621 CLTCL1P53675 1640 aa14.19□□□□□ -0.14
CLK4-209ENST00000521621 IDI1Q13907 227 aa14.19□□□□□ -0.14
CLK4-209ENST00000521621 DIP2AQ14689 1571 aa14.19□□□□□ -0.14
CLK4-209ENST00000521621 KIF1BO60333 1816 aa14.18□□□□□ -0.14
CLK4-209ENST00000521621 CPS1P31327 1500 aa14.18□□□□□ -0.14
CLK4-209ENST00000521621 MYO5BQ9ULV0 1848 aa14.18□□□□□ -0.14
CLK4-209ENST00000521621 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
CLK4-209ENST00000521621 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
CLK4-209ENST00000521621 NWD1Q149M9 1564 aa14.15□□□□□ -0.14
CLK4-209ENST00000521621 HDGFP51858 240 aaKnown RBP14.14□□□□□ -0.15
CLK4-209ENST00000521621 PLEKHG1Q9ULL1 1385 aa14.14□□□□□ -0.15
CLK4-209ENST00000521621 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
CLK4-209ENST00000521621 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLK4-209ENST00000521621 NEXMIFQ5QGS0 1516 aa14.12□□□□□ -0.15
CLK4-209ENST00000521621 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms