RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
HDAC2-211ENST00000521233 ITGAEP38570 1179 aa18.96■□□□□ 0.63
HDAC2-211ENST00000521233 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
HDAC2-211ENST00000521233 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
HDAC2-211ENST00000521233 KIF3BO15066 747 aa18.94■□□□□ 0.62
HDAC2-211ENST00000521233 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
HDAC2-211ENST00000521233 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
HDAC2-211ENST00000521233 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
HDAC2-211ENST00000521233 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
HDAC2-211ENST00000521233 MROH2AA6NES4 1674 aa18.92■□□□□ 0.62
HDAC2-211ENST00000521233 PTPRMP28827 1452 aa18.92■□□□□ 0.62
HDAC2-211ENST00000521233 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
HDAC2-211ENST00000521233 ZC3H13Q5T200 1668 aaKnown RBP18.92■□□□□ 0.62
HDAC2-211ENST00000521233 GCC2Q8IWJ2 1684 aa18.91■□□□□ 0.62
HDAC2-211ENST00000521233 GGT6Q6P531 493 aa18.9■□□□□ 0.62
HDAC2-211ENST00000521233 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
HDAC2-211ENST00000521233 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
HDAC2-211ENST00000521233 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
HDAC2-211ENST00000521233 KANK1Q14678 1352 aa18.86■□□□□ 0.61
HDAC2-211ENST00000521233 UNC13BO14795 1591 aa18.85■□□□□ 0.61
HDAC2-211ENST00000521233 ABCC3O15438 1527 aa18.85■□□□□ 0.61
HDAC2-211ENST00000521233 NAIPQ13075 1403 aa18.84■□□□□ 0.61
HDAC2-211ENST00000521233 C3P01024 1663 aa18.83■□□□□ 0.61
HDAC2-211ENST00000521233 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
HDAC2-211ENST00000521233 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
HDAC2-211ENST00000521233 LMTK2Q8IWU2 1503 aa18.81■□□□□ 0.6
HDAC2-211ENST00000521233 CEP152O94986 1710 aa18.81■□□□□ 0.6
HDAC2-211ENST00000521233 CAMSAP1Q5T5Y3 1602 aa18.8■□□□□ 0.6
HDAC2-211ENST00000521233 NPATQ14207 1427 aa18.8■□□□□ 0.6
HDAC2-211ENST00000521233 ZMYM3Q14202 1370 aa18.8■□□□□ 0.6
HDAC2-211ENST00000521233 PZPP20742 1482 aa18.79■□□□□ 0.6
HDAC2-211ENST00000521233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.6
HDAC2-211ENST00000521233 IQGAP3Q86VI3 1631 aa18.77■□□□□ 0.6
HDAC2-211ENST00000521233 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
HDAC2-211ENST00000521233 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
HDAC2-211ENST00000521233 TET3O43151 1660 aa18.75■□□□□ 0.59
HDAC2-211ENST00000521233 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
HDAC2-211ENST00000521233 PREX1Q8TCU6 1659 aa18.74■□□□□ 0.59
HDAC2-211ENST00000521233 CEBPAP49715 358 aaPredicted RBP18.72■□□□□ 0.59
HDAC2-211ENST00000521233 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
HDAC2-211ENST00000521233 SETD5Q9C0A6 1442 aa18.72■□□□□ 0.59
HDAC2-211ENST00000521233 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
HDAC2-211ENST00000521233 NUP155O75694 1391 aa18.71■□□□□ 0.59
HDAC2-211ENST00000521233 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
HDAC2-211ENST00000521233 UHRF1BP1Q6BDS2 1440 aa18.7■□□□□ 0.58
HDAC2-211ENST00000521233 SPATA31D1Q6ZQQ2 1576 aa18.7■□□□□ 0.58
HDAC2-211ENST00000521233 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
HDAC2-211ENST00000521233 MYO3AQ8NEV4 1616 aa18.69■□□□□ 0.58
HDAC2-211ENST00000521233 TNRQ92752 1358 aa18.68■□□□□ 0.58
HDAC2-211ENST00000521233 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
HDAC2-211ENST00000521233 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
HDAC2-211ENST00000521233 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
HDAC2-211ENST00000521233 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
HDAC2-211ENST00000521233 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
HDAC2-211ENST00000521233 E9PCH4 1651 aa18.63■□□□□ 0.57
HDAC2-211ENST00000521233 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
HDAC2-211ENST00000521233 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
HDAC2-211ENST00000521233 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
HDAC2-211ENST00000521233 NOS1P29475 1434 aa18.61■□□□□ 0.57
HDAC2-211ENST00000521233 FBXO31Q5XUX0 539 aaPredicted RBP18.61■□□□□ 0.57
HDAC2-211ENST00000521233 HRCP23327 699 aa18.59■□□□□ 0.57
HDAC2-211ENST00000521233 SYNMO15061 1565 aa18.59■□□□□ 0.57
HDAC2-211ENST00000521233 SPHKAPQ2M3C7 1700 aa18.57■□□□□ 0.56
HDAC2-211ENST00000521233 CFAP65Q6ZU64 1925 aaKnown RBP18.57■□□□□ 0.56
HDAC2-211ENST00000521233 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
HDAC2-211ENST00000521233 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
HDAC2-211ENST00000521233 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
HDAC2-211ENST00000521233 TRPM2O94759 1503 aa18.54■□□□□ 0.56
HDAC2-211ENST00000521233 PIK3C2BO00750 1634 aa18.53■□□□□ 0.56
HDAC2-211ENST00000521233 PTPRTO14522 1441 aa18.53■□□□□ 0.56
HDAC2-211ENST00000521233 SLC52A1Q9NWF4 448 aa18.53■□□□□ 0.56
HDAC2-211ENST00000521233 PLA2R1Q13018 1463 aa18.52■□□□□ 0.56
HDAC2-211ENST00000521233 PKD2Q13563 968 aa18.52■□□□□ 0.56
HDAC2-211ENST00000521233 ADGRB3O60242 1522 aa18.52■□□□□ 0.56
HDAC2-211ENST00000521233 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
HDAC2-211ENST00000521233 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
HDAC2-211ENST00000521233 HSPA2P54652 639 aa18.48■□□□□ 0.55
HDAC2-211ENST00000521233 THEMISQ8N1K5 641 aaPredicted RBP18.48■□□□□ 0.55
HDAC2-211ENST00000521233 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
HDAC2-211ENST00000521233 IDI1Q13907 227 aa18.45■□□□□ 0.54
HDAC2-211ENST00000521233 CLTCL1P53675 1640 aa18.45■□□□□ 0.54
HDAC2-211ENST00000521233 SLIT1O75093 1534 aa18.44■□□□□ 0.54
HDAC2-211ENST00000521233 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
HDAC2-211ENST00000521233 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
HDAC2-211ENST00000521233 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
HDAC2-211ENST00000521233 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
HDAC2-211ENST00000521233 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
HDAC2-211ENST00000521233 KIF1BO60333 1816 aa18.4■□□□□ 0.54
HDAC2-211ENST00000521233 TMEM2Q9UHN6 1383 aa18.4■□□□□ 0.54
HDAC2-211ENST00000521233 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
HDAC2-211ENST00000521233 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.53
HDAC2-211ENST00000521233 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
HDAC2-211ENST00000521233 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
HDAC2-211ENST00000521233 NEURL4Q96JN8 1562 aa18.37■□□□□ 0.53
HDAC2-211ENST00000521233 MED14O60244 1454 aa18.36■□□□□ 0.53
HDAC2-211ENST00000521233 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
HDAC2-211ENST00000521233 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
HDAC2-211ENST00000521233 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
HDAC2-211ENST00000521233 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
HDAC2-211ENST00000521233 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms