RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
HDAC2-211ENST00000521233 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
HDAC2-211ENST00000521233 ABCC9O60706 1549 aa25.81■■□□□ 1.72
HDAC2-211ENST00000521233 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
HDAC2-211ENST00000521233 NACADO15069 1562 aa25.04■■□□□ 1.6
HDAC2-211ENST00000521233 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
HDAC2-211ENST00000521233 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
HDAC2-211ENST00000521233 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
HDAC2-211ENST00000521233 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
HDAC2-211ENST00000521233 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
HDAC2-211ENST00000521233 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
HDAC2-211ENST00000521233 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
HDAC2-211ENST00000521233 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
HDAC2-211ENST00000521233 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
HDAC2-211ENST00000521233 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
HDAC2-211ENST00000521233 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
HDAC2-211ENST00000521233 CC2D2AQ9P2K1 1620 aa23.39■■□□□ 1.33
HDAC2-211ENST00000521233 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
HDAC2-211ENST00000521233 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
HDAC2-211ENST00000521233 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
HDAC2-211ENST00000521233 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
HDAC2-211ENST00000521233 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
HDAC2-211ENST00000521233 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
HDAC2-211ENST00000521233 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
HDAC2-211ENST00000521233 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
HDAC2-211ENST00000521233 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
HDAC2-211ENST00000521233 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
HDAC2-211ENST00000521233 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
HDAC2-211ENST00000521233 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
HDAC2-211ENST00000521233 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
HDAC2-211ENST00000521233 WIZO95785 1651 aa22.87■■□□□ 1.25
HDAC2-211ENST00000521233 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
HDAC2-211ENST00000521233 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
HDAC2-211ENST00000521233 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
HDAC2-211ENST00000521233 NESP48681 1621 aa22.38■■□□□ 1.17
HDAC2-211ENST00000521233 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
HDAC2-211ENST00000521233 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
HDAC2-211ENST00000521233 CFTRP13569 1480 aa22.3■■□□□ 1.16
HDAC2-211ENST00000521233 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
HDAC2-211ENST00000521233 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
HDAC2-211ENST00000521233 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
HDAC2-211ENST00000521233 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
HDAC2-211ENST00000521233 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
HDAC2-211ENST00000521233 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
HDAC2-211ENST00000521233 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
HDAC2-211ENST00000521233 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
HDAC2-211ENST00000521233 CUX2O14529 1486 aa22.03■■□□□ 1.12
HDAC2-211ENST00000521233 WDR62O43379 1518 aa21.97■■□□□ 1.11
HDAC2-211ENST00000521233 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
HDAC2-211ENST00000521233 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
HDAC2-211ENST00000521233 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
HDAC2-211ENST00000521233 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
HDAC2-211ENST00000521233 CUX1P39880 1505 aa21.7■■□□□ 1.06
HDAC2-211ENST00000521233 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
HDAC2-211ENST00000521233 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
HDAC2-211ENST00000521233 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
HDAC2-211ENST00000521233 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
HDAC2-211ENST00000521233 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
HDAC2-211ENST00000521233 TOP2BQ02880 1626 aa21.61■■□□□ 1.05
HDAC2-211ENST00000521233 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
HDAC2-211ENST00000521233 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
HDAC2-211ENST00000521233 SOGA1O94964 1423 aa21.52■■□□□ 1.04
HDAC2-211ENST00000521233 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
HDAC2-211ENST00000521233 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
HDAC2-211ENST00000521233 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
HDAC2-211ENST00000521233 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
HDAC2-211ENST00000521233 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
HDAC2-211ENST00000521233 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.013e-7■■■■■ 30.5
HDAC2-211ENST00000521233 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
HDAC2-211ENST00000521233 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
HDAC2-211ENST00000521233 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
HDAC2-211ENST00000521233 GRIN2BQ13224 1484 aa21.3■■□□□ 1
HDAC2-211ENST00000521233 PBRM1Q86U86 1689 aa21.28■■□□□ 1
HDAC2-211ENST00000521233 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
HDAC2-211ENST00000521233 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
HDAC2-211ENST00000521233 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
HDAC2-211ENST00000521233 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
HDAC2-211ENST00000521233 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
HDAC2-211ENST00000521233 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
HDAC2-211ENST00000521233 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
HDAC2-211ENST00000521233 CHD1O14646 1710 aa21.12■□□□□ 0.97
HDAC2-211ENST00000521233 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
HDAC2-211ENST00000521233 CUL7Q14999 1698 aa21.08■□□□□ 0.96
HDAC2-211ENST00000521233 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
HDAC2-211ENST00000521233 FBLN2P98095 1184 aa21.04■□□□□ 0.96
HDAC2-211ENST00000521233 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
HDAC2-211ENST00000521233 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
HDAC2-211ENST00000521233 IGF1RP08069 1367 aa21.01■□□□□ 0.95
HDAC2-211ENST00000521233 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
HDAC2-211ENST00000521233 EEA1Q15075 1411 aa20.97■□□□□ 0.95
HDAC2-211ENST00000521233 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
HDAC2-211ENST00000521233 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
HDAC2-211ENST00000521233 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
HDAC2-211ENST00000521233 NUP160Q12769 1436 aa20.91■□□□□ 0.94
HDAC2-211ENST00000521233 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
HDAC2-211ENST00000521233 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
HDAC2-211ENST00000521233 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
HDAC2-211ENST00000521233 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
HDAC2-211ENST00000521233 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.92
HDAC2-211ENST00000521233 ARHGEF11O15085 1522 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms