RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
FAM3B-206ENST00000518236 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
FAM3B-206ENST00000518236 ABCC5O15440 1437 aa16.86■□□□□ 0.29
FAM3B-206ENST00000518236 CLTCQ00610 1675 aaKnown RBP16.85■□□□□ 0.29
FAM3B-206ENST00000518236 MAPK8IP2Q13387 824 aaPredicted RBP16.85■□□□□ 0.29
FAM3B-206ENST00000518236 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
FAM3B-206ENST00000518236 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
FAM3B-206ENST00000518236 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
FAM3B-206ENST00000518236 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
FAM3B-206ENST00000518236 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
FAM3B-206ENST00000518236 DAPK1P53355 1430 aa16.79■□□□□ 0.28
FAM3B-206ENST00000518236 SHANK2Q9UPX8 1470 aa16.79■□□□□ 0.28
FAM3B-206ENST00000518236 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
FAM3B-206ENST00000518236 KDM5DQ9BY66 1539 aa16.78■□□□□ 0.28
FAM3B-206ENST00000518236 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
FAM3B-206ENST00000518236 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
FAM3B-206ENST00000518236 KIF15Q9NS87 1388 aa16.77■□□□□ 0.27
FAM3B-206ENST00000518236 PZPP20742 1482 aa16.76■□□□□ 0.27
FAM3B-206ENST00000518236 PTPRTO14522 1441 aa16.76■□□□□ 0.27
FAM3B-206ENST00000518236 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
FAM3B-206ENST00000518236 ZNF142P52746 1687 aaPredicted RBP16.75■□□□□ 0.27
FAM3B-206ENST00000518236 MYO3AQ8NEV4 1616 aa16.75■□□□□ 0.27
FAM3B-206ENST00000518236 RNF17Q9BXT8 1623 aaKnown RBP16.75■□□□□ 0.27
FAM3B-206ENST00000518236 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
FAM3B-206ENST00000518236 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
FAM3B-206ENST00000518236 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
FAM3B-206ENST00000518236 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
FAM3B-206ENST00000518236 TNRQ92752 1358 aa16.74■□□□□ 0.27
FAM3B-206ENST00000518236 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
FAM3B-206ENST00000518236 NCKAP5LQ9HCH0 1330 aa16.73■□□□□ 0.27
FAM3B-206ENST00000518236 ABCC3O15438 1527 aa16.73■□□□□ 0.27
FAM3B-206ENST00000518236 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
FAM3B-206ENST00000518236 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
FAM3B-206ENST00000518236 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
FAM3B-206ENST00000518236 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
FAM3B-206ENST00000518236 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
FAM3B-206ENST00000518236 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
FAM3B-206ENST00000518236 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
FAM3B-206ENST00000518236 FAM50AQ14320 339 aaKnown RBP16.7■□□□□ 0.26
FAM3B-206ENST00000518236 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
FAM3B-206ENST00000518236 PKD2Q13563 968 aa16.68■□□□□ 0.26
FAM3B-206ENST00000518236 ADGRL2O95490 1459 aa16.67■□□□□ 0.26
FAM3B-206ENST00000518236 PPARGC1BQ86YN6 1023 aaKnown RBP16.67■□□□□ 0.26
FAM3B-206ENST00000518236 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
FAM3B-206ENST00000518236 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
FAM3B-206ENST00000518236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.263e-9■■■□□ 16.8
FAM3B-206ENST00000518236 ERVK-7P63135 1459 aa16.65■□□□□ 0.26
FAM3B-206ENST00000518236 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
FAM3B-206ENST00000518236 ARHGAP31Q2M1Z3 1444 aa16.64■□□□□ 0.25
FAM3B-206ENST00000518236 ZC3H13Q5T200 1668 aaKnown RBP16.64■□□□□ 0.25
FAM3B-206ENST00000518236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.63■□□□□ 0.25
FAM3B-206ENST00000518236 THEMISQ8N1K5 641 aaPredicted RBP16.62■□□□□ 0.25
FAM3B-206ENST00000518236 DEPDC5O75140 1603 aa16.62■□□□□ 0.25
FAM3B-206ENST00000518236 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
FAM3B-206ENST00000518236 CEP152O94986 1710 aa16.61■□□□□ 0.25
FAM3B-206ENST00000518236 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
FAM3B-206ENST00000518236 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
FAM3B-206ENST00000518236 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
FAM3B-206ENST00000518236 KANK1Q14678 1352 aa16.59■□□□□ 0.25
FAM3B-206ENST00000518236 LMTK2Q8IWU2 1503 aa16.59■□□□□ 0.25
FAM3B-206ENST00000518236 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
FAM3B-206ENST00000518236 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
FAM3B-206ENST00000518236 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.24
FAM3B-206ENST00000518236 ROCK1Q13464 1354 aa16.56■□□□□ 0.24
FAM3B-206ENST00000518236 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
FAM3B-206ENST00000518236 POTEHQ6S545 545 aa16.55■□□□□ 0.24
FAM3B-206ENST00000518236 MED14O60244 1454 aa16.54■□□□□ 0.24
FAM3B-206ENST00000518236 ITGAEP38570 1179 aa16.53■□□□□ 0.24
FAM3B-206ENST00000518236 IQSEC2Q5JU85 1478 aa16.53■□□□□ 0.24
FAM3B-206ENST00000518236 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
FAM3B-206ENST00000518236 NOS1P29475 1434 aa16.53■□□□□ 0.24
FAM3B-206ENST00000518236 IDI1Q13907 227 aa16.52■□□□□ 0.24
FAM3B-206ENST00000518236 CFAP65Q6ZU64 1925 aaKnown RBP16.51■□□□□ 0.23
FAM3B-206ENST00000518236 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
FAM3B-206ENST00000518236 ARHGAP23Q9P227 1491 aa16.5■□□□□ 0.23
FAM3B-206ENST00000518236 LTKP29376 864 aa16.5■□□□□ 0.23
FAM3B-206ENST00000518236 RRBP1Q9P2E9 1410 aaKnown RBP16.5■□□□□ 0.23
FAM3B-206ENST00000518236 UBR1Q8IWV7 1749 aa16.49■□□□□ 0.23
FAM3B-206ENST00000518236 SYNMO15061 1565 aa16.48■□□□□ 0.23
FAM3B-206ENST00000518236 SLIT1O75093 1534 aa16.48■□□□□ 0.23
FAM3B-206ENST00000518236 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
FAM3B-206ENST00000518236 TMEM2Q9UHN6 1383 aa16.46■□□□□ 0.23
FAM3B-206ENST00000518236 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
FAM3B-206ENST00000518236 SCAF11Q99590 1463 aaKnown RBP16.46■□□□□ 0.23
FAM3B-206ENST00000518236 UNC13BO14795 1591 aa16.46■□□□□ 0.23
FAM3B-206ENST00000518236 PIK3C2BO00750 1634 aa16.45■□□□□ 0.22
FAM3B-206ENST00000518236 SLC52A1Q9NWF4 448 aa16.45■□□□□ 0.22
FAM3B-206ENST00000518236 STRCP1A6NGW2 1772 aa16.43■□□□□ 0.22
FAM3B-206ENST00000518236 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
FAM3B-206ENST00000518236 NUP155O75694 1391 aa16.42■□□□□ 0.22
FAM3B-206ENST00000518236 CPS1P31327 1500 aa16.42■□□□□ 0.22
FAM3B-206ENST00000518236 TET3O43151 1660 aa16.42■□□□□ 0.22
FAM3B-206ENST00000518236 IQGAP1P46940 1657 aa16.42■□□□□ 0.22
FAM3B-206ENST00000518236 UBAP1LF5GYI3 381 aa16.41■□□□□ 0.22
FAM3B-206ENST00000518236 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
FAM3B-206ENST00000518236 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
FAM3B-206ENST00000518236 IQGAP3Q86VI3 1631 aa16.38■□□□□ 0.21
FAM3B-206ENST00000518236 NAIPQ13075 1403 aa16.38■□□□□ 0.21
FAM3B-206ENST00000518236 KDM5AP29375 1690 aaKnown RBP16.38■□□□□ 0.21
FAM3B-206ENST00000518236 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms