RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
PVT1-206ENST00000517838 CDC42BPBQ9Y5S2 1711 aa11.84□□□□□ -0.51
PVT1-206ENST00000517838 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
PVT1-206ENST00000517838 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
PVT1-206ENST00000517838 KIDINS220Q9ULH0 1771 aa11.83□□□□□ -0.52
PVT1-206ENST00000517838 HSPA1LP34931 641 aa11.83□□□□□ -0.52
PVT1-206ENST00000517838 GGT6Q6P531 493 aa11.83□□□□□ -0.52
PVT1-206ENST00000517838 SAMD9LQ8IVG5 1584 aa11.83□□□□□ -0.52
PVT1-206ENST00000517838 PLA2R1Q13018 1463 aa11.83□□□□□ -0.52
PVT1-206ENST00000517838 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
PVT1-206ENST00000517838 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
PVT1-206ENST00000517838 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
PVT1-206ENST00000517838 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
PVT1-206ENST00000517838 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
PVT1-206ENST00000517838 ITSN2Q9NZM3 1697 aa11.79□□□□□ -0.52
PVT1-206ENST00000517838 A2MP01023 1474 aa11.79□□□□□ -0.52
PVT1-206ENST00000517838 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
PVT1-206ENST00000517838 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
PVT1-206ENST00000517838 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
PVT1-206ENST00000517838 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
PVT1-206ENST00000517838 TOM1O60784 492 aa11.78□□□□□ -0.52
PVT1-206ENST00000517838 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
PVT1-206ENST00000517838 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.52
PVT1-206ENST00000517838 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
PVT1-206ENST00000517838 FBXO31Q5XUX0 539 aaPredicted RBP11.77□□□□□ -0.53
PVT1-206ENST00000517838 MROH2AA6NES4 1674 aa11.77□□□□□ -0.53
PVT1-206ENST00000517838 ZNF644Q9H582 1327 aaPredicted RBP11.76□□□□□ -0.53
PVT1-206ENST00000517838 PLXNC1O60486 1568 aa11.75□□□□□ -0.53
PVT1-206ENST00000517838 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
PVT1-206ENST00000517838 A2ML1A8K2U0 1454 aa11.75□□□□□ -0.53
PVT1-206ENST00000517838 ATP7AQ04656 1500 aa11.75□□□□□ -0.53
PVT1-206ENST00000517838 MYO3AQ8NEV4 1616 aa11.74□□□□□ -0.53
PVT1-206ENST00000517838 CLTCQ00610 1675 aaKnown RBP11.73□□□□□ -0.53
PVT1-206ENST00000517838 MED1Q15648 1581 aaPredicted RBP11.73□□□□□ -0.53
PVT1-206ENST00000517838 CDC42BPAQ5VT25 1732 aa11.73□□□□□ -0.53
PVT1-206ENST00000517838 SUPT6HQ7KZ85 1726 aaKnown RBP11.73□□□□□ -0.53
PVT1-206ENST00000517838 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
PVT1-206ENST00000517838 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
PVT1-206ENST00000517838 SHANK2Q9UPX8 1470 aa11.73□□□□□ -0.53
PVT1-206ENST00000517838 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
PVT1-206ENST00000517838 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
PVT1-206ENST00000517838 DHX29Q7Z478 1369 aaKnown RBP11.72□□□□□ -0.53
PVT1-206ENST00000517838 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
PVT1-206ENST00000517838 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.53
PVT1-206ENST00000517838 TNRQ92752 1358 aa11.71□□□□□ -0.53
PVT1-206ENST00000517838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
PVT1-206ENST00000517838 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
PVT1-206ENST00000517838 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.54
PVT1-206ENST00000517838 CPS1P31327 1500 aa11.7□□□□□ -0.54
PVT1-206ENST00000517838 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
PVT1-206ENST00000517838 KIF3BO15066 747 aa11.7□□□□□ -0.54
PVT1-206ENST00000517838 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
PVT1-206ENST00000517838 RTEL1-TNFRSF6BF6WH68 1400 aa11.69□□□□□ -0.54
PVT1-206ENST00000517838 WASHC2CQ9Y4E1 1318 aa11.68□□□□□ -0.54
PVT1-206ENST00000517838 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
PVT1-206ENST00000517838 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
PVT1-206ENST00000517838 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
PVT1-206ENST00000517838 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
PVT1-206ENST00000517838 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
PVT1-206ENST00000517838 VWDEQ8N2E2 1590 aa11.67□□□□□ -0.54
PVT1-206ENST00000517838 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
PVT1-206ENST00000517838 PZPP20742 1482 aa11.66□□□□□ -0.54
PVT1-206ENST00000517838 RGS17Q9UGC6 210 aaPredicted RBP11.66□□□□□ -0.54
PVT1-206ENST00000517838 NPHP4O75161 1426 aaPredicted RBP11.66□□□□□ -0.54
PVT1-206ENST00000517838 MED14O60244 1454 aa11.65□□□□□ -0.54
PVT1-206ENST00000517838 NLRP1Q9C000 1473 aa11.63□□□□□ -0.55
PVT1-206ENST00000517838 LRRC7Q96NW7 1537 aa11.62□□□□□ -0.55
PVT1-206ENST00000517838 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
PVT1-206ENST00000517838 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
PVT1-206ENST00000517838 KDM5DQ9BY66 1539 aa11.61□□□□□ -0.55
PVT1-206ENST00000517838 FAM135AQ9P2D6 1515 aa11.61□□□□□ -0.55
PVT1-206ENST00000517838 ADGBQ8N7X0 1667 aa11.61□□□□□ -0.55
PVT1-206ENST00000517838 TIAM1Q13009 1591 aa11.6□□□□□ -0.55
PVT1-206ENST00000517838 CEP162Q5TB80 1403 aa11.6□□□□□ -0.55
PVT1-206ENST00000517838 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
PVT1-206ENST00000517838 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
PVT1-206ENST00000517838 LTKP29376 864 aa11.58□□□□□ -0.56
PVT1-206ENST00000517838 POLR1AO95602 1720 aaPredicted RBP11.57□□□□□ -0.56
PVT1-206ENST00000517838 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
PVT1-206ENST00000517838 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
PVT1-206ENST00000517838 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
PVT1-206ENST00000517838 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
PVT1-206ENST00000517838 POTEAQ6S8J7 498 aa11.56□□□□□ -0.56
PVT1-206ENST00000517838 TXNDC2Q86VQ3 553 aa11.55□□□□□ -0.56
PVT1-206ENST00000517838 CAMSAP2Q08AD1 1489 aa11.55□□□□□ -0.56
PVT1-206ENST00000517838 PROM2Q8N271 834 aa11.54□□□□□ -0.56
PVT1-206ENST00000517838 EHBP1L1Q8N3D4 1523 aa11.54□□□□□ -0.56
PVT1-206ENST00000517838 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
PVT1-206ENST00000517838 NCOA2Q15596 1464 aa11.53□□□□□ -0.56
PVT1-206ENST00000517838 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
PVT1-206ENST00000517838 ABCC3O15438 1527 aa11.53□□□□□ -0.56
PVT1-206ENST00000517838 STRCP1A6NGW2 1772 aa11.53□□□□□ -0.56
PVT1-206ENST00000517838 IQGAP1P46940 1657 aa11.52□□□□□ -0.56
PVT1-206ENST00000517838 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.56
PVT1-206ENST00000517838 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
PVT1-206ENST00000517838 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
PVT1-206ENST00000517838 FKBP8Q14318 412 aa11.51□□□□□ -0.57
PVT1-206ENST00000517838 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
PVT1-206ENST00000517838 ARHGAP23Q9P227 1491 aa11.5□□□□□ -0.57
PVT1-206ENST00000517838 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms