RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CROCC2H7BZ55 1655 aa38.13■■■■□ 3.69
PVT1-204ENST00000517525 PTPRKQ15262 1439 aa38.12■■■■□ 3.69
PVT1-204ENST00000517525 EIF2AK4Q9P2K8 1649 aaKnown RBP38.1■■■■□ 3.69
PVT1-204ENST00000517525 KIF15Q9NS87 1388 aa38.09■■■■□ 3.69
PVT1-204ENST00000517525 KDM5DQ9BY66 1539 aa38.09■■■■□ 3.69
PVT1-204ENST00000517525 RNF17Q9BXT8 1623 aaKnown RBP38.08■■■■□ 3.69
PVT1-204ENST00000517525 WASHC2CQ9Y4E1 1318 aa38.06■■■■□ 3.68
PVT1-204ENST00000517525 ERBINQ96RT1 1412 aa38.04■■■■□ 3.68
PVT1-204ENST00000517525 ANKRD30AQ9BXX3 1397 aa38.04■■■■□ 3.68
PVT1-204ENST00000517525 RRP7BPQ9NSQ0 103 aa38.01■■■■□ 3.68
PVT1-204ENST00000517525 NCOA1Q15788 1441 aa38.01■■■■□ 3.68
PVT1-204ENST00000517525 ADGRL2O95490 1459 aa37.99■■■■□ 3.67
PVT1-204ENST00000517525 PZPP20742 1482 aa37.99■■■■□ 3.67
PVT1-204ENST00000517525 FAM50AQ14320 339 aaKnown RBP37.99■■■■□ 3.67
PVT1-204ENST00000517525 MROH1Q8NDA8 1641 aa37.95■■■■□ 3.67
PVT1-204ENST00000517525 CHIC2Q9UKJ5 165 aa37.94■■■■□ 3.66
PVT1-204ENST00000517525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.93■■■■□ 3.66
PVT1-204ENST00000517525 ABCC3O15438 1527 aa37.93■■■■□ 3.66
PVT1-204ENST00000517525 ZC3H13Q5T200 1668 aaKnown RBP37.91■■■■□ 3.66
PVT1-204ENST00000517525 DMRT2Q9Y5R5 561 aa37.9■■■■□ 3.66
PVT1-204ENST00000517525 FBXO31Q5XUX0 539 aaPredicted RBP37.88■■■■□ 3.65
PVT1-204ENST00000517525 PRDM15P57071 1507 aaPredicted RBP37.87■■■■□ 3.65
PVT1-204ENST00000517525 MYO3AQ8NEV4 1616 aa37.87■■■■□ 3.65
PVT1-204ENST00000517525 TNRQ92752 1358 aa37.86■■■■□ 3.65
PVT1-204ENST00000517525 ZNF142P52746 1687 aaPredicted RBP37.85■■■■□ 3.65
PVT1-204ENST00000517525 STRCQ7RTU9 1775 aa37.85■■■■□ 3.65
PVT1-204ENST00000517525 CEP170BQ9Y4F5 1589 aaPredicted RBP37.83■■■■□ 3.65
PVT1-204ENST00000517525 A2ML1A8K2U0 1454 aa37.83■■■■□ 3.65
PVT1-204ENST00000517525 DEPDC5O75140 1603 aa37.83■■■■□ 3.65
PVT1-204ENST00000517525 PPARGC1BQ86YN6 1023 aaKnown RBP37.81■■■■□ 3.64
PVT1-204ENST00000517525 PTPRTO14522 1441 aa37.8■■■■□ 3.64
PVT1-204ENST00000517525 ROCK1Q13464 1354 aa37.8■■■■□ 3.64
PVT1-204ENST00000517525 ARHGAP31Q2M1Z3 1444 aa37.79■■■■□ 3.64
PVT1-204ENST00000517525 PLA2R1Q13018 1463 aa37.78■■■■□ 3.64
PVT1-204ENST00000517525 CAMSAP1Q5T5Y3 1602 aa37.76■■■■□ 3.64
PVT1-204ENST00000517525 KANK1Q14678 1352 aa37.76■■■■□ 3.64
PVT1-204ENST00000517525 ANKRD50Q9ULJ7 1429 aa37.76■■■■□ 3.63
PVT1-204ENST00000517525 NLRP1Q9C000 1473 aa37.75■■■■□ 3.63
PVT1-204ENST00000517525 SPATA31D1Q6ZQQ2 1576 aa37.75■■■■□ 3.63
PVT1-204ENST00000517525 VWDEQ8N2E2 1590 aa37.74■■■■□ 3.63
PVT1-204ENST00000517525 LMTK2Q8IWU2 1503 aa37.72■■■■□ 3.63
PVT1-204ENST00000517525 RRBP1Q9P2E9 1410 aaKnown RBP37.72■■■■□ 3.63
PVT1-204ENST00000517525 ERVK-7P63135 1459 aa37.71■■■■□ 3.63
PVT1-204ENST00000517525 PKD2Q13563 968 aa37.71■■■■□ 3.63
PVT1-204ENST00000517525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.69■■■■□ 3.621e-6■■■■□ 19.8
PVT1-204ENST00000517525 CEP152O94986 1710 aa37.69■■■■□ 3.62
PVT1-204ENST00000517525 THEMISQ8N1K5 641 aaPredicted RBP37.62■■■■□ 3.61
PVT1-204ENST00000517525 FBXO41Q8TF61 875 aa37.61■■■■□ 3.61
PVT1-204ENST00000517525 NCKAP5LQ9HCH0 1330 aa37.61■■■■□ 3.61
PVT1-204ENST00000517525 UGGT1Q9NYU2 1555 aa37.56■■■■□ 3.6
PVT1-204ENST00000517525 ITGAEP38570 1179 aa37.53■■■■□ 3.6
PVT1-204ENST00000517525 CERKQ8TCT0 537 aa37.52■■■■□ 3.6
PVT1-204ENST00000517525 EFCAB6Q5THR3 1501 aa37.51■■■■□ 3.6
PVT1-204ENST00000517525 UNC13BO14795 1591 aa37.5■■■■□ 3.59
PVT1-204ENST00000517525 RPRD2Q5VT52 1461 aaKnown RBP37.48■■■■□ 3.59
PVT1-204ENST00000517525 NOS1P29475 1434 aa37.48■■■■□ 3.59
PVT1-204ENST00000517525 ANKLE2Q86XL3 938 aa37.48■■■■□ 3.59
PVT1-204ENST00000517525 CFAP65Q6ZU64 1925 aaKnown RBP37.44■■■■□ 3.58
PVT1-204ENST00000517525 MED14O60244 1454 aa37.42■■■■□ 3.58
PVT1-204ENST00000517525 LTBP4Q8N2S1 1624 aa37.41■■■■□ 3.58
PVT1-204ENST00000517525 NEURL4Q96JN8 1562 aa37.41■■■■□ 3.58
PVT1-204ENST00000517525 TET3O43151 1660 aa37.41■■■■□ 3.58
PVT1-204ENST00000517525 SLC52A1Q9NWF4 448 aa37.38■■■■□ 3.57
PVT1-204ENST00000517525 UBR1Q8IWV7 1749 aa37.38■■■■□ 3.57
PVT1-204ENST00000517525 POLR1AO95602 1720 aaPredicted RBP37.37■■■■□ 3.57
PVT1-204ENST00000517525 IDI1Q13907 227 aa37.36■■■■□ 3.57
PVT1-204ENST00000517525 SYNMO15061 1565 aa37.35■■■■□ 3.57
PVT1-204ENST00000517525 ARHGAP23Q9P227 1491 aa37.35■■■■□ 3.57
PVT1-204ENST00000517525 IQGAP3Q86VI3 1631 aa37.35■■■■□ 3.57
PVT1-204ENST00000517525 NUP155O75694 1391 aa37.34■■■■□ 3.57
PVT1-204ENST00000517525 SLIT1O75093 1534 aa37.34■■■■□ 3.57
PVT1-204ENST00000517525 NAIPQ13075 1403 aa37.33■■■■□ 3.57
PVT1-204ENST00000517525 KDM5AP29375 1690 aaKnown RBP37.32■■■■□ 3.57
PVT1-204ENST00000517525 GCC2Q8IWJ2 1684 aa37.31■■■■□ 3.56
PVT1-204ENST00000517525 NPHP4O75161 1426 aaPredicted RBP37.31■■■■□ 3.56
PVT1-204ENST00000517525 IQSEC2Q5JU85 1478 aa37.3■■■■□ 3.56
PVT1-204ENST00000517525 ZNF335Q9H4Z2 1342 aaPredicted RBP37.3■■■■□ 3.56
PVT1-204ENST00000517525 PIK3C2BO00750 1634 aa37.29■■■■□ 3.56
PVT1-204ENST00000517525 HFM1A2PYH4 1435 aa37.27■■■■□ 3.56
PVT1-204ENST00000517525 TMEM2Q9UHN6 1383 aa37.26■■■■□ 3.55
PVT1-204ENST00000517525 SCAF11Q99590 1463 aaKnown RBP37.25■■■■□ 3.55
PVT1-204ENST00000517525 STAG3Q9UJ98 1225 aa37.23■■■■□ 3.55
PVT1-204ENST00000517525 LTKP29376 864 aa37.22■■■■□ 3.55
PVT1-204ENST00000517525 TXNDC2Q86VQ3 553 aa37.21■■■■□ 3.55
PVT1-204ENST00000517525 EID1Q9Y6B2 187 aa37.2■■■■□ 3.55
PVT1-204ENST00000517525 E9PCH4 1651 aa37.2■■■■□ 3.55
PVT1-204ENST00000517525 ADGRB3O60242 1522 aa37.19■■■■□ 3.54
PVT1-204ENST00000517525 IQGAP1P46940 1657 aa37.18■■■■□ 3.54
PVT1-204ENST00000517525 CPS1P31327 1500 aa37.12■■■■□ 3.53
PVT1-204ENST00000517525 TMEM131LA2VDJ0 1609 aa37.05■■■■□ 3.52
PVT1-204ENST00000517525 ZFYVE9O95405 1425 aa37.04■■■■□ 3.52
PVT1-204ENST00000517525 HDGFP51858 240 aaKnown RBP37.02■■■■□ 3.52
PVT1-204ENST00000517525 RIMS2Q9UQ26 1411 aa36.96■■■■□ 3.51
PVT1-204ENST00000517525 TRIM52Q96A61 297 aa36.96■■■■□ 3.51
PVT1-204ENST00000517525 ACIN1Q9UKV3 1341 aaKnown RBP36.95■■■■□ 3.51
PVT1-204ENST00000517525 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.95■■■■□ 3.51
PVT1-204ENST00000517525 SPHKAPQ2M3C7 1700 aa36.93■■■■□ 3.5
PVT1-204ENST00000517525 PLEKHG1Q9ULL1 1385 aa36.92■■■■□ 3.5
PVT1-204ENST00000517525 CHGAP10645 457 aaKnown RBP36.9■■■■□ 3.5
PVT1-204ENST00000517525 MYO5BQ9ULV0 1848 aa36.89■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms