RNA–Protein interactions for RNA: ENST00000514004.5

GCLC-209, Transcript of glutamate-cysteine ligase catalytic subunit, human

TSL 1 (best) BASIC

Gene GCLC, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCLC-209	ENST00000514004	PLCH2	O75038	1416 aa		33.02	■■■□□ 2.88
GCLC-209	ENST00000514004	UHRF1BP1L	A0JNW5	1464 aa		33.02	■■■□□ 2.88
GCLC-209	ENST00000514004	POLR3GL	Q9BT43	218 aa		33.01	■■■□□ 2.87
GCLC-209	ENST00000514004	ARID4B	Q4LE39	1312 aa	Predicted RBP	33	■■■□□ 2.87
GCLC-209	ENST00000514004	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.98	■■■□□ 2.87	4e-6	■■□□□ 11.5
GCLC-209	ENST00000514004	IQGAP3	Q86VI3	1631 aa		32.98	■■■□□ 2.87
GCLC-209	ENST00000514004	CCDC144A	A2RUR9	1427 aa		32.97	■■■□□ 2.87
GCLC-209	ENST00000514004	ST20-MTHFS	A0A0A6YYL1	179 aa		32.95	■■■□□ 2.87
GCLC-209	ENST00000514004	DUOX2	Q9NRD8	1548 aa		32.94	■■■□□ 2.86
GCLC-209	ENST00000514004	ABCC1	P33527	1531 aa		32.93	■■■□□ 2.86
GCLC-209	ENST00000514004	PRAG1	Q86YV5	1406 aa		32.92	■■■□□ 2.86
GCLC-209	ENST00000514004	MAGI2	Q86UL8	1455 aa		32.92	■■■□□ 2.86
GCLC-209	ENST00000514004	TRPM1	Q7Z4N2	1603 aa		32.91	■■■□□ 2.86
GCLC-209	ENST00000514004	EFCAB2	Q5VUJ9	269 aa		32.9	■■■□□ 2.86
GCLC-209	ENST00000514004	TRAPPC8	Q9Y2L5	1435 aa		32.9	■■■□□ 2.86
GCLC-209	ENST00000514004	ROCK2	O75116	1388 aa	Known RBP	32.89	■■■□□ 2.86
GCLC-209	ENST00000514004	CNGB1	Q14028	1251 aa	Predicted RBP	32.89	■■■□□ 2.86
GCLC-209	ENST00000514004	ERBIN	Q96RT1	1412 aa		32.88	■■■□□ 2.85
GCLC-209	ENST00000514004	A2M	P01023	1474 aa		32.88	■■■□□ 2.85
GCLC-209	ENST00000514004	RGL3	Q3MIN7	710 aa		32.88	■■■□□ 2.85
GCLC-209	ENST00000514004	ZBED9	Q6R2W3	1325 aa		32.87	■■■□□ 2.85
GCLC-209	ENST00000514004	NBPF1	Q3BBV0	1214 aa		32.82	■■■□□ 2.84
GCLC-209	ENST00000514004	ATP10A	O60312	1499 aa		32.81	■■■□□ 2.84
GCLC-209	ENST00000514004	IRX6	P78412	446 aa	Predicted RBP	32.81	■■■□□ 2.84
GCLC-209	ENST00000514004		E9PCH4	1651 aa		32.79	■■■□□ 2.84
GCLC-209	ENST00000514004	GPRASP1	Q5JY77	1395 aa		32.77	■■■□□ 2.84
GCLC-209	ENST00000514004	AFAP1	Q8N556	730 aa		32.75	■■■□□ 2.83
GCLC-209	ENST00000514004	ARAP3	Q8WWN8	1544 aa		32.74	■■■□□ 2.83
GCLC-209	ENST00000514004	ZFYVE16	Q7Z3T8	1539 aa		32.72	■■■□□ 2.83
GCLC-209	ENST00000514004	SPAG9	O60271	1321 aa	Known RBP	32.7	■■■□□ 2.83
GCLC-209	ENST00000514004	PRDM15	P57071	1507 aa	Predicted RBP	32.69	■■■□□ 2.82
GCLC-209	ENST00000514004	WDR7	Q9Y4E6	1490 aa		32.69	■■■□□ 2.82
GCLC-209	ENST00000514004	LAMC1	P11047	1609 aa		32.69	■■■□□ 2.82
GCLC-209	ENST00000514004	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.68	■■■□□ 2.82
GCLC-209	ENST00000514004	PNISR	Q8TF01	805 aa	Known RBP	32.67	■■■□□ 2.82
GCLC-209	ENST00000514004	ABCA9	Q8IUA7	1624 aa		32.63	■■■□□ 2.81
GCLC-209	ENST00000514004	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.63	■■■□□ 2.81
GCLC-209	ENST00000514004	TESK2	Q96S53	571 aa		32.62	■■■□□ 2.81
GCLC-209	ENST00000514004	FANCA	O15360	1455 aa		32.6	■■■□□ 2.81
GCLC-209	ENST00000514004	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.6	■■■□□ 2.81
GCLC-209	ENST00000514004	TMC1	Q8TDI8	760 aa		32.59	■■■□□ 2.81
GCLC-209	ENST00000514004	DEPDC5	O75140	1603 aa		32.59	■■■□□ 2.81
GCLC-209	ENST00000514004	DISP3	Q9P2K9	1392 aa		32.59	■■■□□ 2.81
GCLC-209	ENST00000514004	INO80	Q9ULG1	1556 aa	Predicted RBP	32.57	■■■□□ 2.8
GCLC-209	ENST00000514004	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.57	■■■□□ 2.8
GCLC-209	ENST00000514004	RNF17	Q9BXT8	1623 aa	Known RBP	32.56	■■■□□ 2.8
GCLC-209	ENST00000514004	KTN1	Q86UP2	1357 aa	Known RBP	32.56	■■■□□ 2.8
GCLC-209	ENST00000514004	RALBP1	Q15311	655 aa		32.55	■■■□□ 2.8
GCLC-209	ENST00000514004	ATP7A	Q04656	1500 aa		32.55	■■■□□ 2.8
GCLC-209	ENST00000514004	PER1	O15534	1290 aa	Predicted RBP	32.55	■■■□□ 2.8
GCLC-209	ENST00000514004	ERICH6B	Q5W0A0	696 aa		32.55	■■■□□ 2.8
GCLC-209	ENST00000514004	SMG6	Q86US8	1419 aa	Known RBP	32.55	■■■□□ 2.8
GCLC-209	ENST00000514004	TRPM2	O94759	1503 aa		32.55	■■■□□ 2.8
GCLC-209	ENST00000514004	BRD4	O60885	1362 aa	Predicted RBP	32.54	■■■□□ 2.8
GCLC-209	ENST00000514004	LRPPRC	P42704	1394 aa	Known RBP	32.54	■■■□□ 2.8
GCLC-209	ENST00000514004	SENP3-EIF4A1	A0A087X0R7	540 aa		32.54	■■■□□ 2.8
GCLC-209	ENST00000514004	PTPRT	O14522	1441 aa		32.52	■■■□□ 2.8
GCLC-209	ENST00000514004	SPHKAP	Q2M3C7	1700 aa		32.52	■■■□□ 2.8
GCLC-209	ENST00000514004	PARD3	Q8TEW0	1356 aa		32.51	■■■□□ 2.79
GCLC-209	ENST00000514004	MADD	Q8WXG6	1647 aa		32.51	■■■□□ 2.79
GCLC-209	ENST00000514004	CLTCL1	P53675	1640 aa		32.49	■■■□□ 2.79
GCLC-209	ENST00000514004	CEP152	O94986	1710 aa		32.49	■■■□□ 2.79
GCLC-209	ENST00000514004	VWDE	Q8N2E2	1590 aa		32.49	■■■□□ 2.79
GCLC-209	ENST00000514004	ASXL2	Q76L83	1435 aa		32.48	■■■□□ 2.79
GCLC-209	ENST00000514004	ADGRL1	O94910	1474 aa		32.48	■■■□□ 2.79
GCLC-209	ENST00000514004	TET3	O43151	1660 aa		32.48	■■■□□ 2.79
GCLC-209	ENST00000514004	SCAPER	Q9BY12	1400 aa		32.48	■■■□□ 2.79
GCLC-209	ENST00000514004	PPP4R2	Q9NY27	417 aa		32.47	■■■□□ 2.79
GCLC-209	ENST00000514004	NUDC	Q9Y266	331 aa		32.46	■■■□□ 2.79
GCLC-209	ENST00000514004	RBM19	Q9Y4C8	960 aa	Known RBP	32.46	■■■□□ 2.79
GCLC-209	ENST00000514004	MROH1	Q8NDA8	1641 aa		32.43	■■■□□ 2.78
GCLC-209	ENST00000514004	KIF3B	O15066	747 aa		32.41	■■■□□ 2.78
GCLC-209	ENST00000514004	IQGAP1	P46940	1657 aa		32.4	■■■□□ 2.78
GCLC-209	ENST00000514004	NLRP13	Q86W25	1043 aa		32.4	■■■□□ 2.78
GCLC-209	ENST00000514004	TMF1	P82094	1093 aa		32.39	■■■□□ 2.78
GCLC-209	ENST00000514004	PANK3	Q9H999	370 aa		32.39	■■■□□ 2.78
GCLC-209	ENST00000514004	RNF123	Q5XPI4	1314 aa		32.37	■■■□□ 2.77
GCLC-209	ENST00000514004	KANK1	Q14678	1352 aa		32.36	■■■□□ 2.77
GCLC-209	ENST00000514004	KIDINS220	Q9ULH0	1771 aa		32.35	■■■□□ 2.77
GCLC-209	ENST00000514004	MYT1L	Q9UL68	1186 aa		32.34	■■■□□ 2.77
GCLC-209	ENST00000514004	B4GALNT3	Q6L9W6	998 aa		32.34	■■■□□ 2.77
GCLC-209	ENST00000514004	WASHC2C	Q9Y4E1	1318 aa		32.34	■■■□□ 2.77
GCLC-209	ENST00000514004	CC2D1B	Q5T0F9	858 aa	Known RBP	32.33	■■■□□ 2.77
GCLC-209	ENST00000514004	UGGT1	Q9NYU2	1555 aa		32.31	■■■□□ 2.76
GCLC-209	ENST00000514004	STAC3	Q96MF2	364 aa		32.27	■■■□□ 2.76
GCLC-209	ENST00000514004	SCAF11	Q99590	1463 aa	Known RBP	32.27	■■■□□ 2.76
GCLC-209	ENST00000514004	NEURL4	Q96JN8	1562 aa		32.25	■■■□□ 2.75
GCLC-209	ENST00000514004	EFCAB6	Q5THR3	1501 aa		32.24	■■■□□ 2.75
GCLC-209	ENST00000514004	ZNF518A	Q6AHZ1	1483 aa		32.23	■■■□□ 2.75
GCLC-209	ENST00000514004	PPRC1	Q5VV67	1664 aa	Known RBP	32.23	■■■□□ 2.75
GCLC-209	ENST00000514004	KIAA1210	Q9ULL0	1709 aa		32.2	■■■□□ 2.75
GCLC-209	ENST00000514004	OSCAR	Q8IYS5	282 aa		32.2	■■■□□ 2.75
GCLC-209	ENST00000514004	SALL2	Q9Y467	1007 aa	Predicted RBP	32.17	■■■□□ 2.74
GCLC-209	ENST00000514004	MAP3K4	Q9Y6R4	1608 aa		32.17	■■■□□ 2.74
GCLC-209	ENST00000514004	KIF1B	O60333	1816 aa		32.16	■■■□□ 2.74
GCLC-209	ENST00000514004	MROH2A	A6NES4	1674 aa		32.16	■■■□□ 2.74
GCLC-209	ENST00000514004	ABCA6	Q8N139	1617 aa		32.16	■■■□□ 2.74
GCLC-209	ENST00000514004	ADGRF5	Q8IZF2	1346 aa		32.15	■■■□□ 2.74
GCLC-209	ENST00000514004	LMTK2	Q8IWU2	1503 aa		32.15	■■■□□ 2.74
GCLC-209	ENST00000514004	CD109	Q6YHK3	1445 aa		32.15	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms