RNA–Protein interactions for RNA: ENST00000514004.5

GCLC-209, Transcript of glutamate-cysteine ligase catalytic subunit, human

TSL 1 (best) BASIC

Gene GCLC, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCLC-209	ENST00000514004	QKI	Q96PU8	341 aa	Known RBP eCLIP	24.82	■■□□□ 1.56	3e-14	■■■■■ 26.8
GCLC-209	ENST00000514004	RBM22	Q9NW64	420 aa	Known RBP eCLIP	24.31	■■□□□ 1.48	3e-11	■■■□□ 18.2
GCLC-209	ENST00000514004	U2AF2	P26368	475 aa	Known RBP eCLIP	27.8	■■■□□ 2.04	6e-9	■□□□□ 10.6
GCLC-209	ENST00000514004	MATR3	P43243	847 aa	Known RBP eCLIP	26.28	■■□□□ 1.8	2e-8	■■□□□ 12.3
GCLC-209	ENST00000514004	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	29.08	■■■□□ 2.25	3e-8	■■□□□ 14.5
GCLC-209	ENST00000514004	DDX3X	O00571	662 aa	Known RBP eCLIP	26.17	■■□□□ 1.78	4e-8	■■■□□ 17.8
GCLC-209	ENST00000514004	LSM11	P83369	360 aa	Known RBP eCLIP	22.65	■■□□□ 1.22	6e-7	■■□□□ 12.2
GCLC-209	ENST00000514004	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.24	■■■□□ 2.91	1e-6	■■■■□ 21
GCLC-209	ENST00000514004	HNRNPC	P07910	306 aa	Known RBP eCLIP	22.72	■■□□□ 1.23	2e-6	■■■□□ 18
GCLC-209	ENST00000514004	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	25.96	■■□□□ 1.75	2e-6	■■■■■ 232.9
GCLC-209	ENST00000514004	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	18.37	■□□□□ 0.53	2e-6	■■■■■ 30.4
GCLC-209	ENST00000514004	TROVE2	P10155	538 aa	Known RBP eCLIP	24.76	■■□□□ 1.55	2e-6	■■■■■ 29.3
GCLC-209	ENST00000514004	RBFOX2	O43251	390 aa	Known RBP eCLIP	19.77	■□□□□ 0.76	2e-6	■■■■□ 22.1
GCLC-209	ENST00000514004	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.49	■■■□□ 2.95	2e-6	■■■□□ 18.4
GCLC-209	ENST00000514004	EFTUD2	Q15029	972 aa	Known RBP eCLIP	25.11	■■□□□ 1.61	3e-6	■■■■■ 41.9
GCLC-209	ENST00000514004	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.98	■■■□□ 2.87	4e-6	■■□□□ 11.5
GCLC-209	ENST00000514004	SF3B1	O75533	1304 aa	Known RBP eCLIP	24.66	■■□□□ 1.54	4e-6	■■■■■ 101.5
GCLC-209	ENST00000514004	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	26	■■□□□ 1.75	7e-6	■□□□□ 9.4

Retrieved 18 of 18 RNA–protein pairs in 6 ms