RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 RGS17Q9UGC6 210 aaPredicted RBP17.81■□□□□ 0.44
NFKB1-211ENST00000513803 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
NFKB1-211ENST00000513803 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
NFKB1-211ENST00000513803 VWDEQ8N2E2 1590 aa17.78■□□□□ 0.44
NFKB1-211ENST00000513803 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
NFKB1-211ENST00000513803 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.44
NFKB1-211ENST00000513803 KIF3BO15066 747 aa17.77■□□□□ 0.44
NFKB1-211ENST00000513803 INO80Q9ULG1 1556 aaPredicted RBP17.77■□□□□ 0.44
NFKB1-211ENST00000513803 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.43
NFKB1-211ENST00000513803 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
NFKB1-211ENST00000513803 MED14O60244 1454 aa17.76■□□□□ 0.43
NFKB1-211ENST00000513803 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
NFKB1-211ENST00000513803 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
NFKB1-211ENST00000513803 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
NFKB1-211ENST00000513803 PZPP20742 1482 aa17.74■□□□□ 0.43
NFKB1-211ENST00000513803 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
NFKB1-211ENST00000513803 ADGBQ8N7X0 1667 aa17.73■□□□□ 0.43
NFKB1-211ENST00000513803 RTEL1-TNFRSF6BF6WH68 1400 aa17.72■□□□□ 0.43
NFKB1-211ENST00000513803 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
NFKB1-211ENST00000513803 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
NFKB1-211ENST00000513803 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
NFKB1-211ENST00000513803 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
NFKB1-211ENST00000513803 DEPDC5O75140 1603 aa17.69■□□□□ 0.42
NFKB1-211ENST00000513803 POTEAQ6S8J7 498 aa17.69■□□□□ 0.42
NFKB1-211ENST00000513803 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
NFKB1-211ENST00000513803 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
NFKB1-211ENST00000513803 IQGAP1P46940 1657 aa17.65■□□□□ 0.42
NFKB1-211ENST00000513803 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
NFKB1-211ENST00000513803 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
NFKB1-211ENST00000513803 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
NFKB1-211ENST00000513803 SYNMO15061 1565 aa17.62■□□□□ 0.41
NFKB1-211ENST00000513803 FAM135BQ49AJ0 1406 aa17.62■□□□□ 0.41
NFKB1-211ENST00000513803 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
NFKB1-211ENST00000513803 TSPY4P0CV99 314 aa17.58■□□□□ 0.4
NFKB1-211ENST00000513803 TSPY10P0CW01 314 aa17.58■□□□□ 0.4
NFKB1-211ENST00000513803 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
NFKB1-211ENST00000513803 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
NFKB1-211ENST00000513803 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
NFKB1-211ENST00000513803 LTKP29376 864 aa17.55■□□□□ 0.4
NFKB1-211ENST00000513803 CCDC141Q6ZP82 1450 aa17.55■□□□□ 0.4
NFKB1-211ENST00000513803 SCAF11Q99590 1463 aaKnown RBP17.55■□□□□ 0.4
NFKB1-211ENST00000513803 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
NFKB1-211ENST00000513803 TMEM94Q12767 1356 aa17.5■□□□□ 0.39
NFKB1-211ENST00000513803 ERVK-7P63135 1459 aa17.5■□□□□ 0.39
NFKB1-211ENST00000513803 ZC3H13Q5T200 1668 aaKnown RBP17.49■□□□□ 0.39
NFKB1-211ENST00000513803 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
NFKB1-211ENST00000513803 KCNA6P17658 529 aa17.49■□□□□ 0.39
NFKB1-211ENST00000513803 PROSER2Q86WR7 435 aaPredicted RBP17.49■□□□□ 0.39
NFKB1-211ENST00000513803 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
NFKB1-211ENST00000513803 ABCC3O15438 1527 aa17.47■□□□□ 0.39
NFKB1-211ENST00000513803 NCOA2Q15596 1464 aa17.46■□□□□ 0.39
NFKB1-211ENST00000513803 ARHGAP23Q9P227 1491 aa17.46■□□□□ 0.39
NFKB1-211ENST00000513803 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
NFKB1-211ENST00000513803 JCADQ9P266 1359 aa17.45■□□□□ 0.38
NFKB1-211ENST00000513803 SLAIN2Q9P270 581 aa17.45■□□□□ 0.38
NFKB1-211ENST00000513803 SLIT1O75093 1534 aa17.45■□□□□ 0.38
NFKB1-211ENST00000513803 EHBP1L1Q8N3D4 1523 aa17.45■□□□□ 0.38
NFKB1-211ENST00000513803 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
NFKB1-211ENST00000513803 CAMSAP2Q08AD1 1489 aa17.44■□□□□ 0.38
NFKB1-211ENST00000513803 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
NFKB1-211ENST00000513803 UBR1Q8IWV7 1749 aa17.44■□□□□ 0.38
NFKB1-211ENST00000513803 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
NFKB1-211ENST00000513803 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
NFKB1-211ENST00000513803 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
NFKB1-211ENST00000513803 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
NFKB1-211ENST00000513803 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
NFKB1-211ENST00000513803 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
NFKB1-211ENST00000513803 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
NFKB1-211ENST00000513803 MSH6P52701 1360 aa17.4■□□□□ 0.38
NFKB1-211ENST00000513803 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
NFKB1-211ENST00000513803 SLC26A8Q96RN1 970 aa17.4■□□□□ 0.38
NFKB1-211ENST00000513803 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
NFKB1-211ENST00000513803 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
NFKB1-211ENST00000513803 RXRBP28702 533 aa17.37■□□□□ 0.37
NFKB1-211ENST00000513803 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
NFKB1-211ENST00000513803 BCANQ96GW7 911 aa17.36■□□□□ 0.37
NFKB1-211ENST00000513803 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
NFKB1-211ENST00000513803 PRDM15P57071 1507 aaPredicted RBP17.35■□□□□ 0.37
NFKB1-211ENST00000513803 MAP3K1Q13233 1512 aa17.34■□□□□ 0.37
NFKB1-211ENST00000513803 EIF2AK4Q9P2K8 1649 aaKnown RBP17.33■□□□□ 0.37
NFKB1-211ENST00000513803 IDI1Q13907 227 aa17.33■□□□□ 0.36
NFKB1-211ENST00000513803 PHLPP1O60346 1717 aa17.33■□□□□ 0.36
NFKB1-211ENST00000513803 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
NFKB1-211ENST00000513803 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
NFKB1-211ENST00000513803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
NFKB1-211ENST00000513803 MROH1Q8NDA8 1641 aa17.3■□□□□ 0.36
NFKB1-211ENST00000513803 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
NFKB1-211ENST00000513803 TET3O43151 1660 aa17.29■□□□□ 0.36
NFKB1-211ENST00000513803 EFCAB6Q5THR3 1501 aa17.29■□□□□ 0.36
NFKB1-211ENST00000513803 CEP152O94986 1710 aa17.29■□□□□ 0.36
NFKB1-211ENST00000513803 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
NFKB1-211ENST00000513803 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
NFKB1-211ENST00000513803 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
NFKB1-211ENST00000513803 KANK1Q14678 1352 aa17.28■□□□□ 0.36
NFKB1-211ENST00000513803 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.36
NFKB1-211ENST00000513803 LRP6O75581 1613 aa17.27■□□□□ 0.36
NFKB1-211ENST00000513803 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
NFKB1-211ENST00000513803 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
NFKB1-211ENST00000513803 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
NFKB1-211ENST00000513803 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms