RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TNRQ92752 1358 aa17.25■□□□□ 0.35
CLDND1-227ENST00000513452 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
CLDND1-227ENST00000513452 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
CLDND1-227ENST00000513452 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
CLDND1-227ENST00000513452 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
CLDND1-227ENST00000513452 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
CLDND1-227ENST00000513452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLDND1-227ENST00000513452 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
CLDND1-227ENST00000513452 PZPP20742 1482 aa17.19■□□□□ 0.34
CLDND1-227ENST00000513452 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
CLDND1-227ENST00000513452 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
CLDND1-227ENST00000513452 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
CLDND1-227ENST00000513452 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
CLDND1-227ENST00000513452 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
CLDND1-227ENST00000513452 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
CLDND1-227ENST00000513452 DEPDC5O75140 1603 aa17.16■□□□□ 0.34
CLDND1-227ENST00000513452 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
CLDND1-227ENST00000513452 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
CLDND1-227ENST00000513452 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
CLDND1-227ENST00000513452 KIF3BO15066 747 aa17.15■□□□□ 0.34
CLDND1-227ENST00000513452 MED14O60244 1454 aa17.15■□□□□ 0.34
CLDND1-227ENST00000513452 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
CLDND1-227ENST00000513452 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
CLDND1-227ENST00000513452 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
CLDND1-227ENST00000513452 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
CLDND1-227ENST00000513452 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-227ENST00000513452 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
CLDND1-227ENST00000513452 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
CLDND1-227ENST00000513452 SYNMO15061 1565 aa17.12■□□□□ 0.33
CLDND1-227ENST00000513452 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
CLDND1-227ENST00000513452 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
CLDND1-227ENST00000513452 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
CLDND1-227ENST00000513452 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.32
CLDND1-227ENST00000513452 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-227ENST00000513452 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
CLDND1-227ENST00000513452 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
CLDND1-227ENST00000513452 ZC3H13Q5T200 1668 aaKnown RBP17.03■□□□□ 0.32
CLDND1-227ENST00000513452 ABCC3O15438 1527 aa17.01■□□□□ 0.31
CLDND1-227ENST00000513452 ERVK-7P63135 1459 aa17■□□□□ 0.31
CLDND1-227ENST00000513452 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CLDND1-227ENST00000513452 UBR1Q8IWV7 1749 aa16.97■□□□□ 0.31
CLDND1-227ENST00000513452 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
CLDND1-227ENST00000513452 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
CLDND1-227ENST00000513452 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
CLDND1-227ENST00000513452 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
CLDND1-227ENST00000513452 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
CLDND1-227ENST00000513452 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
CLDND1-227ENST00000513452 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
CLDND1-227ENST00000513452 CEP152O94986 1710 aa16.93■□□□□ 0.3
CLDND1-227ENST00000513452 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
CLDND1-227ENST00000513452 SLIT1O75093 1534 aa16.92■□□□□ 0.3
CLDND1-227ENST00000513452 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
CLDND1-227ENST00000513452 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
CLDND1-227ENST00000513452 LTKP29376 864 aa16.92■□□□□ 0.3
CLDND1-227ENST00000513452 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
CLDND1-227ENST00000513452 SETD1AO15047 1707 aaKnown RBP16.91■□□□□ 0.3
CLDND1-227ENST00000513452 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
CLDND1-227ENST00000513452 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
CLDND1-227ENST00000513452 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
CLDND1-227ENST00000513452 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
CLDND1-227ENST00000513452 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
CLDND1-227ENST00000513452 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
CLDND1-227ENST00000513452 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
CLDND1-227ENST00000513452 PIK3C2BO00750 1634 aa16.85■□□□□ 0.29
CLDND1-227ENST00000513452 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
CLDND1-227ENST00000513452 TMEM2Q9UHN6 1383 aa16.83■□□□□ 0.28
CLDND1-227ENST00000513452 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-227ENST00000513452 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
CLDND1-227ENST00000513452 DUOX2Q9NRD8 1548 aa16.81■□□□□ 0.28
CLDND1-227ENST00000513452 ARHGAP31Q2M1Z3 1444 aa16.81■□□□□ 0.28
CLDND1-227ENST00000513452 PROSER2Q86WR7 435 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-227ENST00000513452 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
CLDND1-227ENST00000513452 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
CLDND1-227ENST00000513452 KCNA6P17658 529 aa16.79■□□□□ 0.28
CLDND1-227ENST00000513452 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
CLDND1-227ENST00000513452 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
CLDND1-227ENST00000513452 SLC26A8Q96RN1 970 aa16.78■□□□□ 0.28
CLDND1-227ENST00000513452 JCADQ9P266 1359 aa16.77■□□□□ 0.28
CLDND1-227ENST00000513452 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
CLDND1-227ENST00000513452 MSH6P52701 1360 aa16.77■□□□□ 0.27
CLDND1-227ENST00000513452 TET3O43151 1660 aa16.76■□□□□ 0.27
CLDND1-227ENST00000513452 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
CLDND1-227ENST00000513452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLDND1-227ENST00000513452 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
CLDND1-227ENST00000513452 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
CLDND1-227ENST00000513452 LRP6O75581 1613 aa16.74■□□□□ 0.27
CLDND1-227ENST00000513452 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
CLDND1-227ENST00000513452 SLAIN2Q9P270 581 aa16.73■□□□□ 0.27
CLDND1-227ENST00000513452 COL16A1Q07092 1604 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-227ENST00000513452 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLDND1-227ENST00000513452 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
CLDND1-227ENST00000513452 IDI1Q13907 227 aa16.71■□□□□ 0.27
CLDND1-227ENST00000513452 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
CLDND1-227ENST00000513452 KANK1Q14678 1352 aa16.71■□□□□ 0.27
CLDND1-227ENST00000513452 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
CLDND1-227ENST00000513452 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
CLDND1-227ENST00000513452 BCANQ96GW7 911 aa16.7■□□□□ 0.26
CLDND1-227ENST00000513452 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
CLDND1-227ENST00000513452 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
CLDND1-227ENST00000513452 SPATA31A6Q5VVP1 1343 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms