RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
SDHA-215ENST00000512962 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.89
SDHA-215ENST00000512962 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.89
SDHA-215ENST00000512962 NCKAP5LQ9HCH0 1330 aa20.57■□□□□ 0.88
SDHA-215ENST00000512962 ZNF692Q9BU19 519 aaPredicted RBP20.57■□□□□ 0.88
SDHA-215ENST00000512962 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
SDHA-215ENST00000512962 CLIP1P30622 1438 aa20.54■□□□□ 0.88
SDHA-215ENST00000512962 NPATQ14207 1427 aa20.54■□□□□ 0.88
SDHA-215ENST00000512962 CNTLNQ9NXG0 1405 aa20.54■□□□□ 0.88
SDHA-215ENST00000512962 MED1Q15648 1581 aaPredicted RBP20.53■□□□□ 0.88
SDHA-215ENST00000512962 CEP170BQ9Y4F5 1589 aaPredicted RBP20.53■□□□□ 0.88
SDHA-215ENST00000512962 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
SDHA-215ENST00000512962 UBAP1LF5GYI3 381 aa20.52■□□□□ 0.88
SDHA-215ENST00000512962 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
SDHA-215ENST00000512962 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
SDHA-215ENST00000512962 TCOF1Q13428 1488 aaKnown RBP20.51■□□□□ 0.87
SDHA-215ENST00000512962 SYCP2Q9BX26 1530 aa20.5■□□□□ 0.87
SDHA-215ENST00000512962 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
SDHA-215ENST00000512962 PLXNC1O60486 1568 aa20.5■□□□□ 0.87
SDHA-215ENST00000512962 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
SDHA-215ENST00000512962 ESF1Q9H501 851 aaKnown RBP20.49■□□□□ 0.87
SDHA-215ENST00000512962 SSUH2Q9Y2M2 353 aa20.49■□□□□ 0.87
SDHA-215ENST00000512962 PLA2R1Q13018 1463 aa20.49■□□□□ 0.87
SDHA-215ENST00000512962 INO80Q9ULG1 1556 aaPredicted RBP20.47■□□□□ 0.87
SDHA-215ENST00000512962 PTPRKQ15262 1439 aa20.46■□□□□ 0.87
SDHA-215ENST00000512962 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
SDHA-215ENST00000512962 NEURL4Q96JN8 1562 aa20.43■□□□□ 0.86
SDHA-215ENST00000512962 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
SDHA-215ENST00000512962 POLR1AO95602 1720 aaPredicted RBP20.42■□□□□ 0.86
SDHA-215ENST00000512962 UBTFP17480 764 aaKnown RBP20.42■□□□□ 0.86
SDHA-215ENST00000512962 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
SDHA-215ENST00000512962 HSPA1LP34931 641 aa20.41■□□□□ 0.86
SDHA-215ENST00000512962 CACNB1Q02641 598 aaPredicted RBP20.39■□□□□ 0.85
SDHA-215ENST00000512962 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
SDHA-215ENST00000512962 CASKIN1Q8WXD9 1431 aa20.38■□□□□ 0.85
SDHA-215ENST00000512962 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
SDHA-215ENST00000512962 A2MP01023 1474 aa20.37■□□□□ 0.85
SDHA-215ENST00000512962 PKD2Q13563 968 aa20.36■□□□□ 0.85
SDHA-215ENST00000512962 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.85
SDHA-215ENST00000512962 ZNF777Q9ULD5 760 aaPredicted RBP20.35■□□□□ 0.85
SDHA-215ENST00000512962 SPAG9O60271 1321 aaKnown RBP20.34■□□□□ 0.85
SDHA-215ENST00000512962 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
SDHA-215ENST00000512962 ADGBQ8N7X0 1667 aa20.34■□□□□ 0.85
SDHA-215ENST00000512962 PIP4K2BP78356 416 aa20.33■□□□□ 0.85
SDHA-215ENST00000512962 VWDEQ8N2E2 1590 aa20.33■□□□□ 0.84
SDHA-215ENST00000512962 STAG3Q9UJ98 1225 aa20.32■□□□□ 0.84
SDHA-215ENST00000512962 CPS1P31327 1500 aa20.31■□□□□ 0.84
SDHA-215ENST00000512962 GGT6Q6P531 493 aa20.3■□□□□ 0.84
SDHA-215ENST00000512962 STRCP1A6NGW2 1772 aa20.3■□□□□ 0.84
SDHA-215ENST00000512962 SHANK2Q9UPX8 1470 aa20.3■□□□□ 0.84
SDHA-215ENST00000512962 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
SDHA-215ENST00000512962 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.83
SDHA-215ENST00000512962 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
SDHA-215ENST00000512962 TIAM1Q13009 1591 aa20.22■□□□□ 0.83
SDHA-215ENST00000512962 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
SDHA-215ENST00000512962 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
SDHA-215ENST00000512962 ZNF644Q9H582 1327 aaPredicted RBP20.21■□□□□ 0.83
SDHA-215ENST00000512962 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
SDHA-215ENST00000512962 TNRQ92752 1358 aa20.2■□□□□ 0.82
SDHA-215ENST00000512962 PZPP20742 1482 aa20.19■□□□□ 0.82
SDHA-215ENST00000512962 TOM1O60784 492 aa20.19■□□□□ 0.82
SDHA-215ENST00000512962 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
SDHA-215ENST00000512962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.19■□□□□ 0.82
SDHA-215ENST00000512962 DEPDC5O75140 1603 aa20.18■□□□□ 0.82
SDHA-215ENST00000512962 SPOCK2Q92563 424 aa20.18■□□□□ 0.82
SDHA-215ENST00000512962 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
SDHA-215ENST00000512962 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
SDHA-215ENST00000512962 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
SDHA-215ENST00000512962 PLCD3Q8N3E9 789 aa20.15■□□□□ 0.82
SDHA-215ENST00000512962 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
SDHA-215ENST00000512962 MED14O60244 1454 aa20.15■□□□□ 0.82
SDHA-215ENST00000512962 ZC3H13Q5T200 1668 aaKnown RBP20.14■□□□□ 0.81
SDHA-215ENST00000512962 LRRC7Q96NW7 1537 aa20.14■□□□□ 0.81
SDHA-215ENST00000512962 NPHP4O75161 1426 aaPredicted RBP20.14■□□□□ 0.81
SDHA-215ENST00000512962 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
SDHA-215ENST00000512962 SYNMO15061 1565 aa20.12■□□□□ 0.81
SDHA-215ENST00000512962 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
SDHA-215ENST00000512962 DHX29Q7Z478 1369 aaKnown RBP20.12■□□□□ 0.81
SDHA-215ENST00000512962 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
SDHA-215ENST00000512962 RTEL1-TNFRSF6BF6WH68 1400 aa20.1■□□□□ 0.81
SDHA-215ENST00000512962 FAM135AQ9P2D6 1515 aa20.08■□□□□ 0.81
SDHA-215ENST00000512962 NLRP1Q9C000 1473 aa20.08■□□□□ 0.81
SDHA-215ENST00000512962 MIER1Q8N108 512 aa20.08■□□□□ 0.81
SDHA-215ENST00000512962 MIA2Q96PC5 1412 aa20.08■□□□□ 0.8
SDHA-215ENST00000512962 KIF3BO15066 747 aa20.07■□□□□ 0.8
SDHA-215ENST00000512962 ANKLE2Q86XL3 938 aa20.07■□□□□ 0.8
SDHA-215ENST00000512962 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
SDHA-215ENST00000512962 MTUS2Q5JR59 1369 aa20.05■□□□□ 0.8
SDHA-215ENST00000512962 UBR1Q8IWV7 1749 aa20.04■□□□□ 0.8
SDHA-215ENST00000512962 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
SDHA-215ENST00000512962 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.8
SDHA-215ENST00000512962 CAMSAP2Q08AD1 1489 aa20.02■□□□□ 0.8
SDHA-215ENST00000512962 ABCC3O15438 1527 aa20.02■□□□□ 0.79
SDHA-215ENST00000512962 THEMISQ8N1K5 641 aaPredicted RBP20.01■□□□□ 0.79
SDHA-215ENST00000512962 CEP152O94986 1710 aa20.01■□□□□ 0.79
SDHA-215ENST00000512962 MROH1Q8NDA8 1641 aa20.01■□□□□ 0.79
SDHA-215ENST00000512962 WASHC2CQ9Y4E1 1318 aa20■□□□□ 0.79
SDHA-215ENST00000512962 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
SDHA-215ENST00000512962 PLCB2Q00722 1185 aa19.98■□□□□ 0.79
SDHA-215ENST00000512962 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms