RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 RSPH4AQ5TD94 716 aa21.33■■□□□ 1.01
CLDND1-224ENST00000511667 ADGBQ8N7X0 1667 aa21.32■■□□□ 1
CLDND1-224ENST00000511667 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
CLDND1-224ENST00000511667 TOM1O60784 492 aa21.31■■□□□ 1
CLDND1-224ENST00000511667 MROH2AA6NES4 1674 aa21.29■■□□□ 1
CLDND1-224ENST00000511667 TCOF1Q13428 1488 aaKnown RBP21.28■■□□□ 1
CLDND1-224ENST00000511667 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
CLDND1-224ENST00000511667 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
CLDND1-224ENST00000511667 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
CLDND1-224ENST00000511667 MAST1Q9Y2H9 1570 aa21.27■□□□□ 0.99
CLDND1-224ENST00000511667 ZMYM3Q14202 1370 aa21.25■□□□□ 0.99
CLDND1-224ENST00000511667 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
CLDND1-224ENST00000511667 MYO3AQ8NEV4 1616 aa21.22■□□□□ 0.99
CLDND1-224ENST00000511667 CPS1P31327 1500 aa21.22■□□□□ 0.99
CLDND1-224ENST00000511667 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
CLDND1-224ENST00000511667 PTPRKQ15262 1439 aa21.17■□□□□ 0.98
CLDND1-224ENST00000511667 CLTCQ00610 1675 aaKnown RBP21.15■□□□□ 0.98
CLDND1-224ENST00000511667 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
CLDND1-224ENST00000511667 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
CLDND1-224ENST00000511667 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
CLDND1-224ENST00000511667 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
CLDND1-224ENST00000511667 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.98
CLDND1-224ENST00000511667 APLP2Q06481 763 aa21.14■□□□□ 0.97
CLDND1-224ENST00000511667 ABCC5O15440 1437 aa21.13■□□□□ 0.97
CLDND1-224ENST00000511667 CROCC2H7BZ55 1655 aa21.12■□□□□ 0.97
CLDND1-224ENST00000511667 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
CLDND1-224ENST00000511667 GGT6Q6P531 493 aa21.11■□□□□ 0.97
CLDND1-224ENST00000511667 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
CLDND1-224ENST00000511667 EIF2AK4Q9P2K8 1649 aaKnown RBP21.1■□□□□ 0.97
CLDND1-224ENST00000511667 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.97
CLDND1-224ENST00000511667 KIF3BO15066 747 aa21.08■□□□□ 0.97
CLDND1-224ENST00000511667 KDM5DQ9BY66 1539 aa21.08■□□□□ 0.96
CLDND1-224ENST00000511667 DAPK1P53355 1430 aa21.07■□□□□ 0.96
CLDND1-224ENST00000511667 MROH1Q8NDA8 1641 aa21.07■□□□□ 0.96
CLDND1-224ENST00000511667 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-224ENST00000511667 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
CLDND1-224ENST00000511667 ALKQ9UM73 1620 aa21.05■□□□□ 0.96
CLDND1-224ENST00000511667 RGS17Q9UGC6 210 aaPredicted RBP21.04■□□□□ 0.96
CLDND1-224ENST00000511667 PZPP20742 1482 aa21.04■□□□□ 0.96
CLDND1-224ENST00000511667 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
CLDND1-224ENST00000511667 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-224ENST00000511667 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
CLDND1-224ENST00000511667 KIF15Q9NS87 1388 aa21■□□□□ 0.95
CLDND1-224ENST00000511667 ABCC3O15438 1527 aa21■□□□□ 0.95
CLDND1-224ENST00000511667 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
CLDND1-224ENST00000511667 VWDEQ8N2E2 1590 aa21■□□□□ 0.95
CLDND1-224ENST00000511667 ADGRL2O95490 1459 aa21■□□□□ 0.95
CLDND1-224ENST00000511667 PRDM15P57071 1507 aaPredicted RBP20.98■□□□□ 0.95
CLDND1-224ENST00000511667 DEPDC5O75140 1603 aa20.97■□□□□ 0.95
CLDND1-224ENST00000511667 ANKLE2Q86XL3 938 aa20.97■□□□□ 0.95
CLDND1-224ENST00000511667 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
CLDND1-224ENST00000511667 FBXO31Q5XUX0 539 aaPredicted RBP20.94■□□□□ 0.94
CLDND1-224ENST00000511667 TNRQ92752 1358 aa20.93■□□□□ 0.94
CLDND1-224ENST00000511667 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
CLDND1-224ENST00000511667 ARHGAP31Q2M1Z3 1444 aa20.93■□□□□ 0.94
CLDND1-224ENST00000511667 MED14O60244 1454 aa20.91■□□□□ 0.94
CLDND1-224ENST00000511667 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
CLDND1-224ENST00000511667 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
CLDND1-224ENST00000511667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.9■□□□□ 0.94
CLDND1-224ENST00000511667 POTEAQ6S8J7 498 aa20.9■□□□□ 0.94
CLDND1-224ENST00000511667 THEMISQ8N1K5 641 aaPredicted RBP20.9■□□□□ 0.94
CLDND1-224ENST00000511667 LMTK2Q8IWU2 1503 aa20.89■□□□□ 0.94
CLDND1-224ENST00000511667 LRRC7Q96NW7 1537 aa20.89■□□□□ 0.94
CLDND1-224ENST00000511667 NLRP1Q9C000 1473 aa20.89■□□□□ 0.94
CLDND1-224ENST00000511667 CEP152O94986 1710 aa20.89■□□□□ 0.93
CLDND1-224ENST00000511667 SYNMO15061 1565 aa20.88■□□□□ 0.93
CLDND1-224ENST00000511667 ERVK-7P63135 1459 aa20.88■□□□□ 0.93
CLDND1-224ENST00000511667 CHIC2Q9UKJ5 165 aa20.85■□□□□ 0.93
CLDND1-224ENST00000511667 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
CLDND1-224ENST00000511667 ROCK1Q13464 1354 aa20.84■□□□□ 0.93
CLDND1-224ENST00000511667 STRCP1A6NGW2 1772 aa20.83■□□□□ 0.93
CLDND1-224ENST00000511667 UGGT1Q9NYU2 1555 aa20.83■□□□□ 0.92
CLDND1-224ENST00000511667 FAM50AQ14320 339 aaKnown RBP20.82■□□□□ 0.92
CLDND1-224ENST00000511667 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
CLDND1-224ENST00000511667 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
CLDND1-224ENST00000511667 RRBP1Q9P2E9 1410 aaKnown RBP20.78■□□□□ 0.92
CLDND1-224ENST00000511667 EFCAB6Q5THR3 1501 aa20.77■□□□□ 0.92
CLDND1-224ENST00000511667 KANK1Q14678 1352 aa20.75■□□□□ 0.91
CLDND1-224ENST00000511667 NOS1P29475 1434 aa20.75■□□□□ 0.91
CLDND1-224ENST00000511667 UNC13BO14795 1591 aa20.75■□□□□ 0.91
CLDND1-224ENST00000511667 UBR1Q8IWV7 1749 aa20.75■□□□□ 0.91
CLDND1-224ENST00000511667 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
CLDND1-224ENST00000511667 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
CLDND1-224ENST00000511667 ARHGAP23Q9P227 1491 aa20.73■□□□□ 0.91
CLDND1-224ENST00000511667 KDM5AP29375 1690 aaKnown RBP20.72■□□□□ 0.91
CLDND1-224ENST00000511667 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
CLDND1-224ENST00000511667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLDND1-224ENST00000511667 SLIT1O75093 1534 aa20.71■□□□□ 0.91
CLDND1-224ENST00000511667 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
CLDND1-224ENST00000511667 TET3O43151 1660 aa20.69■□□□□ 0.9
CLDND1-224ENST00000511667 UPF1Q92900 1129 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLDND1-224ENST00000511667 PIK3C2BO00750 1634 aa20.67■□□□□ 0.9
CLDND1-224ENST00000511667 IQGAP3Q86VI3 1631 aa20.66■□□□□ 0.9
CLDND1-224ENST00000511667 XIRP1Q702N8 1843 aaKnown RBP20.66■□□□□ 0.9
CLDND1-224ENST00000511667 GCC2Q8IWJ2 1684 aa20.65■□□□□ 0.9
CLDND1-224ENST00000511667 IDI1Q13907 227 aa20.63■□□□□ 0.89
CLDND1-224ENST00000511667 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
CLDND1-224ENST00000511667 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
CLDND1-224ENST00000511667 ROBO1Q9Y6N7 1651 aa20.61■□□□□ 0.89
CLDND1-224ENST00000511667 TMEM2Q9UHN6 1383 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms