RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 KIF3BO15066 747 aa26.45■■□□□ 1.82
CLDND1-221ENST00000510541 NPATQ14207 1427 aa26.44■■□□□ 1.82
CLDND1-221ENST00000510541 GGT6Q6P531 493 aa26.41■■□□□ 1.82
CLDND1-221ENST00000510541 ZMYM3Q14202 1370 aa26.41■■□□□ 1.82
CLDND1-221ENST00000510541 C3P01024 1663 aa26.41■■□□□ 1.82
CLDND1-221ENST00000510541 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
CLDND1-221ENST00000510541 ZC3H13Q5T200 1668 aaKnown RBP26.4■■□□□ 1.82
CLDND1-221ENST00000510541 DEPDC5O75140 1603 aa26.39■■□□□ 1.82
CLDND1-221ENST00000510541 PRDM15P57071 1507 aaPredicted RBP26.39■■□□□ 1.81
CLDND1-221ENST00000510541 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
CLDND1-221ENST00000510541 MROH1Q8NDA8 1641 aa26.38■■□□□ 1.81
CLDND1-221ENST00000510541 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
CLDND1-221ENST00000510541 CLTCQ00610 1675 aaKnown RBP26.34■■□□□ 1.81
CLDND1-221ENST00000510541 ANKRD50Q9ULJ7 1429 aa26.34■■□□□ 1.81
CLDND1-221ENST00000510541 PZPP20742 1482 aa26.32■■□□□ 1.8
CLDND1-221ENST00000510541 LMTK3Q96Q04 1460 aa26.32■■□□□ 1.8
CLDND1-221ENST00000510541 CHIC2Q9UKJ5 165 aa26.32■■□□□ 1.8
CLDND1-221ENST00000510541 WASHC2CQ9Y4E1 1318 aa26.32■■□□□ 1.8
CLDND1-221ENST00000510541 VWDEQ8N2E2 1590 aa26.32■■□□□ 1.8
CLDND1-221ENST00000510541 ABCC3O15438 1527 aa26.31■■□□□ 1.8
CLDND1-221ENST00000510541 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
CLDND1-221ENST00000510541 ARHGAP31Q2M1Z3 1444 aa26.31■■□□□ 1.8
CLDND1-221ENST00000510541 LMTK2Q8IWU2 1503 aa26.3■■□□□ 1.8
CLDND1-221ENST00000510541 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
CLDND1-221ENST00000510541 UHRF1BP1Q6BDS2 1440 aa26.25■■□□□ 1.79
CLDND1-221ENST00000510541 KANK1Q14678 1352 aa26.25■■□□□ 1.79
CLDND1-221ENST00000510541 UNC13BO14795 1591 aa26.21■■□□□ 1.79
CLDND1-221ENST00000510541 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
CLDND1-221ENST00000510541 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
CLDND1-221ENST00000510541 CAMSAP1Q5T5Y3 1602 aa26.18■■□□□ 1.78
CLDND1-221ENST00000510541 ZNF142P52746 1687 aaPredicted RBP26.18■■□□□ 1.78
CLDND1-221ENST00000510541 RPRD2Q5VT52 1461 aaKnown RBP26.17■■□□□ 1.78
CLDND1-221ENST00000510541 NAIPQ13075 1403 aa26.16■■□□□ 1.78
CLDND1-221ENST00000510541 NLRP1Q9C000 1473 aa26.16■■□□□ 1.78
CLDND1-221ENST00000510541 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
CLDND1-221ENST00000510541 CEP152O94986 1710 aa26.14■■□□□ 1.78
CLDND1-221ENST00000510541 GCC2Q8IWJ2 1684 aa26.14■■□□□ 1.78
CLDND1-221ENST00000510541 TNRQ92752 1358 aa26.13■■□□□ 1.77
CLDND1-221ENST00000510541 ERVK-7P63135 1459 aa26.12■■□□□ 1.77
CLDND1-221ENST00000510541 MYO3AQ8NEV4 1616 aa26.12■■□□□ 1.77
CLDND1-221ENST00000510541 A2ML1A8K2U0 1454 aa26.11■■□□□ 1.77
CLDND1-221ENST00000510541 EFCAB6Q5THR3 1501 aa26.11■■□□□ 1.77
CLDND1-221ENST00000510541 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
CLDND1-221ENST00000510541 TET3O43151 1660 aa26.09■■□□□ 1.77
CLDND1-221ENST00000510541 CEP170BQ9Y4F5 1589 aaPredicted RBP26.09■■□□□ 1.77
CLDND1-221ENST00000510541 ITGAEP38570 1179 aa26.09■■□□□ 1.77
CLDND1-221ENST00000510541 PLA2R1Q13018 1463 aa26.09■■□□□ 1.77
CLDND1-221ENST00000510541 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
CLDND1-221ENST00000510541 NOS1P29475 1434 aa26.06■■□□□ 1.76
CLDND1-221ENST00000510541 PLPPR3Q6T4P5 718 aa26.06■■□□□ 1.76
CLDND1-221ENST00000510541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.06■■□□□ 1.76
CLDND1-221ENST00000510541 KDM5AP29375 1690 aaKnown RBP26.02■■□□□ 1.76
CLDND1-221ENST00000510541 NUP155O75694 1391 aa26.01■■□□□ 1.75
CLDND1-221ENST00000510541 DMRT2Q9Y5R5 561 aa26.01■■□□□ 1.75
CLDND1-221ENST00000510541 HSPA2P54652 639 aa25.99■■□□□ 1.75
CLDND1-221ENST00000510541 PKD2Q13563 968 aa25.98■■□□□ 1.75
CLDND1-221ENST00000510541 SLC52A1Q9NWF4 448 aa25.98■■□□□ 1.75
CLDND1-221ENST00000510541 PTPRTO14522 1441 aa25.97■■□□□ 1.75
CLDND1-221ENST00000510541 STRCQ7RTU9 1775 aa25.97■■□□□ 1.75
CLDND1-221ENST00000510541 THEMISQ8N1K5 641 aaPredicted RBP25.97■■□□□ 1.75
CLDND1-221ENST00000510541 UGGT1Q9NYU2 1555 aa25.96■■□□□ 1.75
CLDND1-221ENST00000510541 HRCP23327 699 aa25.93■■□□□ 1.74
CLDND1-221ENST00000510541 E9PCH4 1651 aa25.93■■□□□ 1.74
CLDND1-221ENST00000510541 SYNMO15061 1565 aa25.92■■□□□ 1.74
CLDND1-221ENST00000510541 CFAP65Q6ZU64 1925 aaKnown RBP25.9■■□□□ 1.74
CLDND1-221ENST00000510541 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
CLDND1-221ENST00000510541 PIK3C2BO00750 1634 aa25.88■■□□□ 1.73
CLDND1-221ENST00000510541 UBR1Q8IWV7 1749 aa25.88■■□□□ 1.73
CLDND1-221ENST00000510541 SLIT1O75093 1534 aa25.88■■□□□ 1.73
CLDND1-221ENST00000510541 ARHGAP23Q9P227 1491 aa25.87■■□□□ 1.73
CLDND1-221ENST00000510541 MED14O60244 1454 aa25.86■■□□□ 1.73
CLDND1-221ENST00000510541 IDI1Q13907 227 aa25.86■■□□□ 1.73
CLDND1-221ENST00000510541 ANKLE2Q86XL3 938 aa25.82■■□□□ 1.72
CLDND1-221ENST00000510541 POLR1AO95602 1720 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-221ENST00000510541 ADGRB3O60242 1522 aa25.8■■□□□ 1.72
CLDND1-221ENST00000510541 TMEM2Q9UHN6 1383 aa25.79■■□□□ 1.72
CLDND1-221ENST00000510541 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
CLDND1-221ENST00000510541 NEURL4Q96JN8 1562 aa25.78■■□□□ 1.72
CLDND1-221ENST00000510541 TRPM2O94759 1503 aa25.77■■□□□ 1.72
CLDND1-221ENST00000510541 TMEM131LA2VDJ0 1609 aa25.75■■□□□ 1.71
CLDND1-221ENST00000510541 SCAF11Q99590 1463 aaKnown RBP25.74■■□□□ 1.71
CLDND1-221ENST00000510541 RAB3GAP2Q9H2M9 1393 aa25.74■■□□□ 1.71
CLDND1-221ENST00000510541 TRIM52Q96A61 297 aa25.74■■□□□ 1.71
CLDND1-221ENST00000510541 SLC4A1APQ9BWU0 796 aaKnown RBP25.74■■□□□ 1.71
CLDND1-221ENST00000510541 NCKAP5LQ9HCH0 1330 aa25.73■■□□□ 1.71
CLDND1-221ENST00000510541 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
CLDND1-221ENST00000510541 MPHOSPH9Q99550 1183 aa25.7■■□□□ 1.7
CLDND1-221ENST00000510541 STAG3Q9UJ98 1225 aa25.7■■□□□ 1.7
CLDND1-221ENST00000510541 EID1Q9Y6B2 187 aa25.7■■□□□ 1.7
CLDND1-221ENST00000510541 NPHP4O75161 1426 aaPredicted RBP25.7■■□□□ 1.7
CLDND1-221ENST00000510541 ZFYVE9O95405 1425 aa25.69■■□□□ 1.7
CLDND1-221ENST00000510541 IQGAP1P46940 1657 aa25.66■■□□□ 1.7
CLDND1-221ENST00000510541 LTKP29376 864 aa25.65■■□□□ 1.7
CLDND1-221ENST00000510541 TXNDC2Q86VQ3 553 aa25.65■■□□□ 1.7
CLDND1-221ENST00000510541 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.65■■□□□ 1.7
CLDND1-221ENST00000510541 IQSEC2Q5JU85 1478 aa25.64■■□□□ 1.69
CLDND1-221ENST00000510541 LTBP4Q8N2S1 1624 aa25.63■■□□□ 1.69
CLDND1-221ENST00000510541 CLTCL1P53675 1640 aa25.62■■□□□ 1.69
CLDND1-221ENST00000510541 PLEKHG1Q9ULL1 1385 aa25.59■■□□□ 1.69
CLDND1-221ENST00000510541 MYO5BQ9ULV0 1848 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms