RNA–Protein interactions for RNA: ENST00000510499.1

TMED9-205, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-205ENST00000510499 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
TMED9-205ENST00000510499 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
TMED9-205ENST00000510499 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
TMED9-205ENST00000510499 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
TMED9-205ENST00000510499 VWDEQ8N2E2 1590 aa15.84■□□□□ 0.13
TMED9-205ENST00000510499 TNRQ92752 1358 aa15.84■□□□□ 0.13
TMED9-205ENST00000510499 ALKQ9UM73 1620 aa15.83■□□□□ 0.13
TMED9-205ENST00000510499 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
TMED9-205ENST00000510499 PZPP20742 1482 aa15.82■□□□□ 0.12
TMED9-205ENST00000510499 TIAM1Q13009 1591 aa15.82■□□□□ 0.12
TMED9-205ENST00000510499 DEPDC5O75140 1603 aa15.82■□□□□ 0.12
TMED9-205ENST00000510499 IQGAP1P46940 1657 aa15.81■□□□□ 0.12
TMED9-205ENST00000510499 RNF17Q9BXT8 1623 aaKnown RBP15.81■□□□□ 0.12
TMED9-205ENST00000510499 SYNMO15061 1565 aa15.8■□□□□ 0.12
TMED9-205ENST00000510499 UGGT1Q9NYU2 1555 aa15.79■□□□□ 0.12
TMED9-205ENST00000510499 NPHP4O75161 1426 aaPredicted RBP15.78■□□□□ 0.12
TMED9-205ENST00000510499 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
TMED9-205ENST00000510499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.12
TMED9-205ENST00000510499 STRCP1A6NGW2 1772 aa15.78■□□□□ 0.12
TMED9-205ENST00000510499 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
TMED9-205ENST00000510499 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.12
TMED9-205ENST00000510499 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.12
TMED9-205ENST00000510499 MED14O60244 1454 aa15.77■□□□□ 0.11
TMED9-205ENST00000510499 MBD5Q9P267 1494 aa15.77■□□□□ 0.11
TMED9-205ENST00000510499 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
TMED9-205ENST00000510499 FBXO31Q5XUX0 539 aaPredicted RBP15.76■□□□□ 0.11
TMED9-205ENST00000510499 EHBP1L1Q8N3D4 1523 aa15.76■□□□□ 0.11
TMED9-205ENST00000510499 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
TMED9-205ENST00000510499 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
TMED9-205ENST00000510499 KIF3BO15066 747 aa15.73■□□□□ 0.11
TMED9-205ENST00000510499 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
TMED9-205ENST00000510499 MIA2Q96PC5 1412 aa15.73■□□□□ 0.11
TMED9-205ENST00000510499 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
TMED9-205ENST00000510499 ZC3H13Q5T200 1668 aaKnown RBP15.72■□□□□ 0.11
TMED9-205ENST00000510499 WASHC2CQ9Y4E1 1318 aa15.71■□□□□ 0.11
TMED9-205ENST00000510499 CAMSAP2Q08AD1 1489 aa15.69■□□□□ 0.1
TMED9-205ENST00000510499 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
TMED9-205ENST00000510499 XIRP1Q702N8 1843 aaKnown RBP15.66■□□□□ 0.1
TMED9-205ENST00000510499 UBR1Q8IWV7 1749 aa15.66■□□□□ 0.1
TMED9-205ENST00000510499 CFAP65Q6ZU64 1925 aaKnown RBP15.66■□□□□ 0.1
TMED9-205ENST00000510499 ABCC3O15438 1527 aa15.65■□□□□ 0.1
TMED9-205ENST00000510499 CEP152O94986 1710 aa15.64■□□□□ 0.09
TMED9-205ENST00000510499 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.09
TMED9-205ENST00000510499 ERVK-7P63135 1459 aa15.64■□□□□ 0.09
TMED9-205ENST00000510499 EIF2AK4Q9P2K8 1649 aaKnown RBP15.63■□□□□ 0.09
TMED9-205ENST00000510499 SCAF11Q99590 1463 aaKnown RBP15.62■□□□□ 0.09
TMED9-205ENST00000510499 NCOA2Q15596 1464 aa15.61■□□□□ 0.09
TMED9-205ENST00000510499 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
TMED9-205ENST00000510499 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
TMED9-205ENST00000510499 MROH1Q8NDA8 1641 aa15.59■□□□□ 0.09
TMED9-205ENST00000510499 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
TMED9-205ENST00000510499 SETD1AO15047 1707 aaKnown RBP15.58■□□□□ 0.08
TMED9-205ENST00000510499 SLIT1O75093 1534 aa15.58■□□□□ 0.08
TMED9-205ENST00000510499 ARHGAP23Q9P227 1491 aa15.56■□□□□ 0.08
TMED9-205ENST00000510499 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
TMED9-205ENST00000510499 TSPY4P0CV99 314 aa15.55■□□□□ 0.08
TMED9-205ENST00000510499 TSPY10P0CW01 314 aa15.55■□□□□ 0.08
TMED9-205ENST00000510499 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
TMED9-205ENST00000510499 PIK3C2BO00750 1634 aa15.53■□□□□ 0.08
TMED9-205ENST00000510499 POTEAQ6S8J7 498 aa15.52■□□□□ 0.08
TMED9-205ENST00000510499 PRDM15P57071 1507 aaPredicted RBP15.52■□□□□ 0.07
TMED9-205ENST00000510499 LTKP29376 864 aa15.51■□□□□ 0.07
TMED9-205ENST00000510499 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
TMED9-205ENST00000510499 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
TMED9-205ENST00000510499 MAP3K1Q13233 1512 aa15.5■□□□□ 0.07
TMED9-205ENST00000510499 DUOX2Q9NRD8 1548 aa15.49■□□□□ 0.07
TMED9-205ENST00000510499 PHLPP1O60346 1717 aa15.49■□□□□ 0.07
TMED9-205ENST00000510499 KDM5AP29375 1690 aaKnown RBP15.49■□□□□ 0.07
TMED9-205ENST00000510499 EID1Q9Y6B2 187 aa15.49■□□□□ 0.07
TMED9-205ENST00000510499 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
TMED9-205ENST00000510499 ARHGAP31Q2M1Z3 1444 aa15.47■□□□□ 0.07
TMED9-205ENST00000510499 CROCC2H7BZ55 1655 aa15.46■□□□□ 0.07
TMED9-205ENST00000510499 EFCAB6Q5THR3 1501 aa15.46■□□□□ 0.07
TMED9-205ENST00000510499 TMEM2Q9UHN6 1383 aa15.46■□□□□ 0.07
TMED9-205ENST00000510499 NWD1Q149M9 1564 aa15.45■□□□□ 0.06
TMED9-205ENST00000510499 NKTRP30414 1462 aaKnown RBP15.45■□□□□ 0.06
TMED9-205ENST00000510499 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
TMED9-205ENST00000510499 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
TMED9-205ENST00000510499 TET3O43151 1660 aa15.41■□□□□ 0.06
TMED9-205ENST00000510499 KCNA6P17658 529 aa15.41■□□□□ 0.06
TMED9-205ENST00000510499 MSH6P52701 1360 aa15.4■□□□□ 0.06
TMED9-205ENST00000510499 COL16A1Q07092 1604 aaPredicted RBP15.4■□□□□ 0.06
TMED9-205ENST00000510499 KIF15Q9NS87 1388 aa15.4■□□□□ 0.06
TMED9-205ENST00000510499 JCADQ9P266 1359 aa15.4■□□□□ 0.06
TMED9-205ENST00000510499 ADGRB3O60242 1522 aa15.4■□□□□ 0.06
TMED9-205ENST00000510499 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
TMED9-205ENST00000510499 MYOM3Q5VTT5 1437 aa15.4■□□□□ 0.06
TMED9-205ENST00000510499 RBM33Q96EV2 1170 aaKnown RBP15.39■□□□□ 0.05
TMED9-205ENST00000510499 KANK1Q14678 1352 aa15.37■□□□□ 0.05
TMED9-205ENST00000510499 SLC26A8Q96RN1 970 aa15.37■□□□□ 0.05
TMED9-205ENST00000510499 CHD2O14647 1828 aaKnown RBP15.36■□□□□ 0.05
TMED9-205ENST00000510499 LMTK2Q8IWU2 1503 aa15.36■□□□□ 0.05
TMED9-205ENST00000510499 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
TMED9-205ENST00000510499 LRP6O75581 1613 aa15.35■□□□□ 0.05
TMED9-205ENST00000510499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
TMED9-205ENST00000510499 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
TMED9-205ENST00000510499 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
TMED9-205ENST00000510499 IDI1Q13907 227 aa15.33■□□□□ 0.04
TMED9-205ENST00000510499 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
TMED9-205ENST00000510499 FGD6Q6ZV73 1430 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms