RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
MATR3-215ENST00000510056 FRMPD1Q5SYB0 1578 aa9.95□□□□□ -0.82
MATR3-215ENST00000510056 MFAP1P55081 439 aaKnown RBP9.94□□□□□ -0.82
MATR3-215ENST00000510056 STK25O00506 426 aa9.94□□□□□ -0.82
MATR3-215ENST00000510056 FAM9AQ8IZU1 332 aaPredicted RBP9.94□□□□□ -0.82
MATR3-215ENST00000510056 ABCA9Q8IUA7 1624 aa9.94□□□□□ -0.82
MATR3-215ENST00000510056 PHLDB1Q86UU1 1377 aa9.93□□□□□ -0.82
MATR3-215ENST00000510056 NEO1Q92859 1461 aa9.92□□□□□ -0.82
MATR3-215ENST00000510056 KDM4CQ9H3R0 1056 aa9.91□□□□□ -0.82
MATR3-215ENST00000510056 POLR3GLQ9BT43 218 aa9.91□□□□□ -0.82
MATR3-215ENST00000510056 CEBPAP49715 358 aaPredicted RBP9.9□□□□□ -0.82
MATR3-215ENST00000510056 ARHGEF40Q8TER5 1519 aa9.9□□□□□ -0.83
MATR3-215ENST00000510056 TMCO4Q5TGY1 634 aa9.89□□□□□ -0.83
MATR3-215ENST00000510056 DENND4BO75064 1496 aaPredicted RBP9.89□□□□□ -0.83
MATR3-215ENST00000510056 SIGLEC1Q9BZZ2 1709 aa9.89□□□□□ -0.83
MATR3-215ENST00000510056 YEATS2Q9ULM3 1422 aa9.89□□□□□ -0.83
MATR3-215ENST00000510056 ZMYND10O75800 440 aa9.88□□□□□ -0.83
MATR3-215ENST00000510056 MIER1Q8N108 512 aa9.88□□□□□ -0.83
MATR3-215ENST00000510056 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
MATR3-215ENST00000510056 POGZQ7Z3K3 1410 aa9.88□□□□□ -0.83
MATR3-215ENST00000510056 IRF5Q13568 498 aa9.88□□□□□ -0.83
MATR3-215ENST00000510056 SPATA31D1Q6ZQQ2 1576 aa9.87□□□□□ -0.83
MATR3-215ENST00000510056 FANCAO15360 1455 aa9.87□□□□□ -0.83
MATR3-215ENST00000510056 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
MATR3-215ENST00000510056 AKNAQ7Z591 1439 aa9.87□□□□□ -0.83
MATR3-215ENST00000510056 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
MATR3-215ENST00000510056 FER1L4A9Z1Z3 1794 aa9.86□□□□□ -0.83
MATR3-215ENST00000510056 RAPGEF6Q8TEU7 1601 aa9.86□□□□□ -0.83
MATR3-215ENST00000510056 RETREG2Q8NC44 543 aa9.85□□□□□ -0.83
MATR3-215ENST00000510056 DCAF8L1A6NGE4 600 aa9.85□□□□□ -0.83
MATR3-215ENST00000510056 PLEKHD1A6NEE1 506 aa9.85□□□□□ -0.83
MATR3-215ENST00000510056 ZFYVE16Q7Z3T8 1539 aa9.85□□□□□ -0.83
MATR3-215ENST00000510056 DMRT2Q9Y5R5 561 aa9.84□□□□□ -0.83
MATR3-215ENST00000510056 FHOD3Q2V2M9 1422 aa9.84□□□□□ -0.83
MATR3-215ENST00000510056 PUS7Q96PZ0 661 aaKnown RBP9.84□□□□□ -0.83
MATR3-215ENST00000510056 STRCQ7RTU9 1775 aa9.83□□□□□ -0.84
MATR3-215ENST00000510056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.83□□□□□ -0.843e-7■■■□□ 18.1
MATR3-215ENST00000510056 PRXQ9BXM0 1461 aa9.83□□□□□ -0.84
MATR3-215ENST00000510056 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
MATR3-215ENST00000510056 NUP153P49790 1475 aaKnown RBP9.82□□□□□ -0.84
MATR3-215ENST00000510056 PREX1Q8TCU6 1659 aa9.82□□□□□ -0.84
MATR3-215ENST00000510056 TTC37Q6PGP7 1564 aa9.81□□□□□ -0.84
MATR3-215ENST00000510056 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
MATR3-215ENST00000510056 EFCAB5A4FU69 1503 aa9.81□□□□□ -0.84
MATR3-215ENST00000510056 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
MATR3-215ENST00000510056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.8□□□□□ -0.843e-7■□□□□ 11.1
MATR3-215ENST00000510056 FAM177A1Q8N128 213 aaPredicted RBP9.8□□□□□ -0.84
MATR3-215ENST00000510056 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
MATR3-215ENST00000510056 CARNS1A5YM72 827 aa9.8□□□□□ -0.84
MATR3-215ENST00000510056 ZMYM4Q5VZL5 1548 aa9.79□□□□□ -0.84
MATR3-215ENST00000510056 CFAP74Q9C0B2 1584 aa9.79□□□□□ -0.84
MATR3-215ENST00000510056 UHRF1BP1Q6BDS2 1440 aa9.79□□□□□ -0.84
MATR3-215ENST00000510056 SAMD9Q5K651 1589 aa9.79□□□□□ -0.84
MATR3-215ENST00000510056 BCL11BQ9C0K0 894 aaPredicted RBP9.78□□□□□ -0.84
MATR3-215ENST00000510056 ARHGEF12Q9NZN5 1544 aa9.78□□□□□ -0.84
MATR3-215ENST00000510056 ATP10AO60312 1499 aa9.77□□□□□ -0.85
MATR3-215ENST00000510056 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
MATR3-215ENST00000510056 MAGI2Q86UL8 1455 aa9.77□□□□□ -0.85
MATR3-215ENST00000510056 STK24Q9Y6E0 443 aa9.76□□□□□ -0.85
MATR3-215ENST00000510056 ZNF316A6NFI3 1004 aaPredicted RBP9.75□□□□□ -0.85
MATR3-215ENST00000510056 POM121Q96HA1 1249 aa9.75□□□□□ -0.85
MATR3-215ENST00000510056 C9orf84Q5VXU9 1444 aa9.75□□□□□ -0.85
MATR3-215ENST00000510056 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
MATR3-215ENST00000510056 TRAK2O60296 914 aa9.75□□□□□ -0.85
MATR3-215ENST00000510056 AFAP1Q8N556 730 aa9.74□□□□□ -0.85
MATR3-215ENST00000510056 SETD1BQ9UPS6 1966 aaKnown RBP9.74□□□□□ -0.85
MATR3-215ENST00000510056 CDK13Q14004 1512 aaKnown RBP9.74□□□□□ -0.85
MATR3-215ENST00000510056 RBM26Q5T8P6 1007 aaKnown RBP9.74□□□□□ -0.85
MATR3-215ENST00000510056 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
MATR3-215ENST00000510056 TESPA1A2RU30 521 aaPredicted RBP9.74□□□□□ -0.85
MATR3-215ENST00000510056 FBXW7Q969H0 707 aa9.74□□□□□ -0.85
MATR3-215ENST00000510056 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
MATR3-215ENST00000510056 LTBP4Q8N2S1 1624 aa9.74□□□□□ -0.85
MATR3-215ENST00000510056 PTPRTO14522 1441 aa9.73□□□□□ -0.85
MATR3-215ENST00000510056 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
MATR3-215ENST00000510056 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
MATR3-215ENST00000510056 PLCH2O75038 1416 aa9.72□□□□□ -0.85
MATR3-215ENST00000510056 EFCAB2Q5VUJ9 269 aa9.72□□□□□ -0.85
MATR3-215ENST00000510056 TRAIPQ9BWF2 469 aa9.72□□□□□ -0.85
MATR3-215ENST00000510056 CWC22Q9HCG8 908 aaKnown RBP9.72□□□□□ -0.85
MATR3-215ENST00000510056 ZNF335Q9H4Z2 1342 aaPredicted RBP9.71□□□□□ -0.85
MATR3-215ENST00000510056 E9PSI1 815 aa9.71□□□□□ -0.85
MATR3-215ENST00000510056 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
MATR3-215ENST00000510056 C3P01024 1663 aa9.71□□□□□ -0.86
MATR3-215ENST00000510056 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
MATR3-215ENST00000510056 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
MATR3-215ENST00000510056 PDE4DQ08499 809 aa9.69□□□□□ -0.86
MATR3-215ENST00000510056 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
MATR3-215ENST00000510056 HMGB1P09429 215 aaKnown RBP9.69□□□□□ -0.86
MATR3-215ENST00000510056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.69□□□□□ -0.86
MATR3-215ENST00000510056 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
MATR3-215ENST00000510056 ZFP91Q96JP5 570 aaPredicted RBP9.69□□□□□ -0.86
MATR3-215ENST00000510056 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
MATR3-215ENST00000510056 BRD2P25440 801 aaKnown RBP9.68□□□□□ -0.86
MATR3-215ENST00000510056 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
MATR3-215ENST00000510056 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
MATR3-215ENST00000510056 MYO5CQ9NQX4 1742 aa9.68□□□□□ -0.86
MATR3-215ENST00000510056 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
MATR3-215ENST00000510056 KRI1Q8N9T8 703 aaKnown RBP9.67□□□□□ -0.86
MATR3-215ENST00000510056 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms