RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ADGRL1O94910 1474 aa24.78■■□□□ 1.56
SFXN1-208ENST00000507823 GTF3C3Q9Y5Q9 886 aa24.77■■□□□ 1.56
SFXN1-208ENST00000507823 CCDC144AA2RUR9 1427 aa24.76■■□□□ 1.55
SFXN1-208ENST00000507823 EIF2AK4Q9P2K8 1649 aaKnown RBP24.75■■□□□ 1.55
SFXN1-208ENST00000507823 AFAP1Q8N556 730 aa24.75■■□□□ 1.55
SFXN1-208ENST00000507823 CNTLNQ9NXG0 1405 aa24.75■■□□□ 1.55
SFXN1-208ENST00000507823 CFAP74Q9C0B2 1584 aa24.75■■□□□ 1.55
SFXN1-208ENST00000507823 SCAPERQ9BY12 1400 aa24.74■■□□□ 1.55
SFXN1-208ENST00000507823 VWDEQ8N2E2 1590 aa24.74■■□□□ 1.55
SFXN1-208ENST00000507823 C11orf95C9JLR9 678 aaPredicted RBP24.73■■□□□ 1.55
SFXN1-208ENST00000507823 NPM1P06748 294 aaKnown RBP eCLIP24.72■■□□□ 1.55
SFXN1-208ENST00000507823 USP47Q96K76 1375 aa24.7■■□□□ 1.55
SFXN1-208ENST00000507823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.68■■□□□ 1.547e-7■□□□□ 11.1
SFXN1-208ENST00000507823 E9PCH4 1651 aa24.68■■□□□ 1.54
SFXN1-208ENST00000507823 TET3O43151 1660 aa24.68■■□□□ 1.54
SFXN1-208ENST00000507823 BCORL1Q5H9F3 1711 aa24.67■■□□□ 1.54
SFXN1-208ENST00000507823 KIDINS220Q9ULH0 1771 aa24.67■■□□□ 1.54
SFXN1-208ENST00000507823 ARID4BQ4LE39 1312 aaPredicted RBP24.67■■□□□ 1.54
SFXN1-208ENST00000507823 TRPM1Q7Z4N2 1603 aa24.67■■□□□ 1.54
SFXN1-208ENST00000507823 PRAG1Q86YV5 1406 aa24.67■■□□□ 1.54
SFXN1-208ENST00000507823 ZNF518AQ6AHZ1 1483 aa24.66■■□□□ 1.54
SFXN1-208ENST00000507823 KIF7Q2M1P5 1343 aa24.66■■□□□ 1.54
SFXN1-208ENST00000507823 DHX29Q7Z478 1369 aaKnown RBP24.66■■□□□ 1.54
SFXN1-208ENST00000507823 A2MP01023 1474 aa24.66■■□□□ 1.54
SFXN1-208ENST00000507823 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
SFXN1-208ENST00000507823 LAMC1P11047 1609 aa24.65■■□□□ 1.54
SFXN1-208ENST00000507823 MROH1Q8NDA8 1641 aa24.65■■□□□ 1.54
SFXN1-208ENST00000507823 PTPRTO14522 1441 aa24.65■■□□□ 1.54
SFXN1-208ENST00000507823 CD109Q6YHK3 1445 aa24.65■■□□□ 1.54
SFXN1-208ENST00000507823 TRPM2O94759 1503 aa24.64■■□□□ 1.54
SFXN1-208ENST00000507823 DCAF11Q8TEB1 546 aa24.62■■□□□ 1.53
SFXN1-208ENST00000507823 GPRASP1Q5JY77 1395 aa24.61■■□□□ 1.53
SFXN1-208ENST00000507823 SPHKAPQ2M3C7 1700 aa24.61■■□□□ 1.53
SFXN1-208ENST00000507823 POGZQ7Z3K3 1410 aa24.6■■□□□ 1.53
SFXN1-208ENST00000507823 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
SFXN1-208ENST00000507823 ZNF326Q5BKZ1 582 aaKnown RBP24.59■■□□□ 1.53
SFXN1-208ENST00000507823 NEURL4Q96JN8 1562 aa24.59■■□□□ 1.53
SFXN1-208ENST00000507823 NEO1Q92859 1461 aa24.58■■□□□ 1.53
SFXN1-208ENST00000507823 RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
SFXN1-208ENST00000507823 CEP152O94986 1710 aa24.57■■□□□ 1.52
SFXN1-208ENST00000507823 CARD11Q9BXL7 1154 aa24.56■■□□□ 1.52
SFXN1-208ENST00000507823 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
SFXN1-208ENST00000507823 KANK1Q14678 1352 aa24.56■■□□□ 1.52
SFXN1-208ENST00000507823 KDM2AQ9Y2K7 1162 aa24.54■■□□□ 1.52
SFXN1-208ENST00000507823 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
SFXN1-208ENST00000507823 ROCK2O75116 1388 aaKnown RBP24.52■■□□□ 1.52
SFXN1-208ENST00000507823 CLTCL1P53675 1640 aa24.52■■□□□ 1.52
SFXN1-208ENST00000507823 GLI2P10070 1586 aa24.52■■□□□ 1.52
SFXN1-208ENST00000507823 MAP3K4Q9Y6R4 1608 aa24.51■■□□□ 1.51
SFXN1-208ENST00000507823 FRMPD1Q5SYB0 1578 aa24.5■■□□□ 1.51
SFXN1-208ENST00000507823 EFCAB6Q5THR3 1501 aa24.5■■□□□ 1.51
SFXN1-208ENST00000507823 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
SFXN1-208ENST00000507823 KIF3BO15066 747 aa24.48■■□□□ 1.51
SFXN1-208ENST00000507823 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
SFXN1-208ENST00000507823 MADDQ8WXG6 1647 aa24.46■■□□□ 1.51
SFXN1-208ENST00000507823 RGL3Q3MIN7 710 aa24.46■■□□□ 1.51
SFXN1-208ENST00000507823 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
SFXN1-208ENST00000507823 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
SFXN1-208ENST00000507823 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
SFXN1-208ENST00000507823 ABCA6Q8N139 1617 aa24.44■■□□□ 1.5
SFXN1-208ENST00000507823 PPRC1Q5VV67 1664 aaKnown RBP24.44■■□□□ 1.5
SFXN1-208ENST00000507823 ST20-MTHFSA0A0A6YYL1 179 aa24.44■■□□□ 1.5
SFXN1-208ENST00000507823 RICTORQ6R327 1708 aa24.42■■□□□ 1.5
SFXN1-208ENST00000507823 NBPF1Q3BBV0 1214 aa24.4■■□□□ 1.5
SFXN1-208ENST00000507823 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.5
SFXN1-208ENST00000507823 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
SFXN1-208ENST00000507823 DIP2CQ9Y2E4 1556 aa24.37■■□□□ 1.49
SFXN1-208ENST00000507823 IQGAP1P46940 1657 aa24.36■■□□□ 1.49
SFXN1-208ENST00000507823 COL17A1Q9UMD9 1497 aaPredicted RBP24.36■■□□□ 1.49
SFXN1-208ENST00000507823 KIF1BO60333 1816 aa24.34■■□□□ 1.49
SFXN1-208ENST00000507823 MYOM2P54296 1465 aa24.34■■□□□ 1.49
SFXN1-208ENST00000507823 IFT172Q9UG01 1749 aa24.34■■□□□ 1.49
SFXN1-208ENST00000507823 TESK2Q96S53 571 aa24.32■■□□□ 1.48
SFXN1-208ENST00000507823 DIP2BQ9P265 1576 aa24.32■■□□□ 1.48
SFXN1-208ENST00000507823 ABCC3O15438 1527 aa24.31■■□□□ 1.48
SFXN1-208ENST00000507823 CCDC184Q52MB2 194 aa24.31■■□□□ 1.48
SFXN1-208ENST00000507823 CYB5RLQ6IPT4 315 aa24.31■■□□□ 1.48
SFXN1-208ENST00000507823 KTN1Q86UP2 1357 aaKnown RBP24.29■■□□□ 1.48
SFXN1-208ENST00000507823 NPATQ14207 1427 aa24.29■■□□□ 1.48
SFXN1-208ENST00000507823 ZMYM4Q5VZL5 1548 aa24.29■■□□□ 1.48
SFXN1-208ENST00000507823 UGGT1Q9NYU2 1555 aa24.29■■□□□ 1.48
SFXN1-208ENST00000507823 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
SFXN1-208ENST00000507823 NRXN1Q9ULB1 1477 aa24.28■■□□□ 1.48
SFXN1-208ENST00000507823 MROH2AA6NES4 1674 aa24.27■■□□□ 1.48
SFXN1-208ENST00000507823 CAMSAP1Q5T5Y3 1602 aa24.26■■□□□ 1.47
SFXN1-208ENST00000507823 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
SFXN1-208ENST00000507823 ZC3H13Q5T200 1668 aaKnown RBP24.25■■□□□ 1.47
SFXN1-208ENST00000507823 SCAF11Q99590 1463 aaKnown RBP24.25■■□□□ 1.47
SFXN1-208ENST00000507823 MRS2Q9HD23 443 aa24.23■■□□□ 1.47
SFXN1-208ENST00000507823 ARHGAP31Q2M1Z3 1444 aa24.22■■□□□ 1.47
SFXN1-208ENST00000507823 DISP3Q9P2K9 1392 aa24.22■■□□□ 1.47
SFXN1-208ENST00000507823 NOS1P29475 1434 aa24.22■■□□□ 1.47
SFXN1-208ENST00000507823 POLR3GLQ9BT43 218 aa24.21■■□□□ 1.47
SFXN1-208ENST00000507823 SUPT16HQ9Y5B9 1047 aaKnown RBP24.21■■□□□ 1.47
SFXN1-208ENST00000507823 PIK3C2BO00750 1634 aa24.2■■□□□ 1.46
SFXN1-208ENST00000507823 HNRNPUQ00839 825 aaKnown RBP eCLIP24.19■■□□□ 1.46
SFXN1-208ENST00000507823 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
SFXN1-208ENST00000507823 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
SFXN1-208ENST00000507823 TMF1P82094 1093 aa24.17■■□□□ 1.46
SFXN1-208ENST00000507823 PPLO60437 1756 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms