RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 PREX1Q8TCU6 1659 aa29.58■■■□□ 2.33
LMNA-221ENST00000506981 PPP6R1Q9UPN7 881 aa29.58■■■□□ 2.33
LMNA-221ENST00000506981 ERBINQ96RT1 1412 aa29.57■■■□□ 2.32
LMNA-221ENST00000506981 RRP7BPQ9NSQ0 103 aa29.57■■■□□ 2.32
LMNA-221ENST00000506981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.56■■■□□ 2.32
LMNA-221ENST00000506981 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
LMNA-221ENST00000506981 ZC3H13Q5T200 1668 aaKnown RBP29.55■■■□□ 2.32
LMNA-221ENST00000506981 CEBPAP49715 358 aaPredicted RBP29.54■■■□□ 2.32
LMNA-221ENST00000506981 NCOA1Q15788 1441 aa29.54■■■□□ 2.32
LMNA-221ENST00000506981 RRBP1Q9P2E9 1410 aaKnown RBP29.53■■■□□ 2.32
LMNA-221ENST00000506981 CEP152O94986 1710 aa29.49■■■□□ 2.31
LMNA-221ENST00000506981 ZMYM3Q14202 1370 aa29.49■■■□□ 2.31
LMNA-221ENST00000506981 MROH1Q8NDA8 1641 aa29.48■■■□□ 2.31
LMNA-221ENST00000506981 DEPDC5O75140 1603 aa29.47■■■□□ 2.31
LMNA-221ENST00000506981 ITGAEP38570 1179 aa29.47■■■□□ 2.31
LMNA-221ENST00000506981 WASHC2CQ9Y4E1 1318 aa29.46■■■□□ 2.31
LMNA-221ENST00000506981 LMTK3Q96Q04 1460 aa29.46■■■□□ 2.31
LMNA-221ENST00000506981 PRDM15P57071 1507 aaPredicted RBP29.45■■■□□ 2.3
LMNA-221ENST00000506981 PTPRKQ15262 1439 aa29.45■■■□□ 2.3
LMNA-221ENST00000506981 NPATQ14207 1427 aa29.44■■■□□ 2.3
LMNA-221ENST00000506981 ROCK1Q13464 1354 aa29.43■■■□□ 2.3
LMNA-221ENST00000506981 ABCC3O15438 1527 aa29.42■■■□□ 2.3
LMNA-221ENST00000506981 UHRF1BP1Q6BDS2 1440 aa29.42■■■□□ 2.3
LMNA-221ENST00000506981 CAMSAP1Q5T5Y3 1602 aa29.41■■■□□ 2.3
LMNA-221ENST00000506981 ANKRD50Q9ULJ7 1429 aa29.39■■■□□ 2.3
LMNA-221ENST00000506981 KANK1Q14678 1352 aa29.38■■■□□ 2.29
LMNA-221ENST00000506981 CFAP65Q6ZU64 1925 aaKnown RBP29.37■■■□□ 2.29
LMNA-221ENST00000506981 PZPP20742 1482 aa29.37■■■□□ 2.29
LMNA-221ENST00000506981 MYO3AQ8NEV4 1616 aa29.37■■■□□ 2.29
LMNA-221ENST00000506981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.34■■■□□ 2.29
LMNA-221ENST00000506981 ZNF142P52746 1687 aaPredicted RBP29.32■■■□□ 2.28
LMNA-221ENST00000506981 GCC2Q8IWJ2 1684 aa29.31■■■□□ 2.28
LMNA-221ENST00000506981 UNC13BO14795 1591 aa29.3■■■□□ 2.28
LMNA-221ENST00000506981 VWDEQ8N2E2 1590 aa29.28■■■□□ 2.28
LMNA-221ENST00000506981 HSPA2P54652 639 aa29.27■■■□□ 2.28
LMNA-221ENST00000506981 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.27
LMNA-221ENST00000506981 TNRQ92752 1358 aa29.25■■■□□ 2.27
LMNA-221ENST00000506981 LMTK2Q8IWU2 1503 aa29.25■■■□□ 2.27
LMNA-221ENST00000506981 SPATA31D1Q6ZQQ2 1576 aa29.23■■■□□ 2.27
LMNA-221ENST00000506981 FBXO31Q5XUX0 539 aaPredicted RBP29.22■■■□□ 2.27
LMNA-221ENST00000506981 TET3O43151 1660 aa29.21■■■□□ 2.27
LMNA-221ENST00000506981 ERVK-7P63135 1459 aa29.21■■■□□ 2.27
LMNA-221ENST00000506981 ARHGAP31Q2M1Z3 1444 aa29.2■■■□□ 2.27
LMNA-221ENST00000506981 EFCAB6Q5THR3 1501 aa29.2■■■□□ 2.27
LMNA-221ENST00000506981 A2ML1A8K2U0 1454 aa29.18■■■□□ 2.26
LMNA-221ENST00000506981 IQGAP3Q86VI3 1631 aa29.18■■■□□ 2.26
LMNA-221ENST00000506981 NLRP1Q9C000 1473 aa29.16■■■□□ 2.26
LMNA-221ENST00000506981 STRCQ7RTU9 1775 aa29.15■■■□□ 2.26
LMNA-221ENST00000506981 NAIPQ13075 1403 aa29.14■■■□□ 2.26
LMNA-221ENST00000506981 HFM1A2PYH4 1435 aa29.13■■■□□ 2.25
LMNA-221ENST00000506981 RPRD2Q5VT52 1461 aaKnown RBP29.1■■■□□ 2.25
LMNA-221ENST00000506981 NUP155O75694 1391 aa29.09■■■□□ 2.25
LMNA-221ENST00000506981 E9PCH4 1651 aa29.09■■■□□ 2.25
LMNA-221ENST00000506981 UGGT1Q9NYU2 1555 aa29.08■■■□□ 2.25
LMNA-221ENST00000506981 POLR1AO95602 1720 aaPredicted RBP29.07■■■□□ 2.24
LMNA-221ENST00000506981 PLA2R1Q13018 1463 aa29.06■■■□□ 2.24
LMNA-221ENST00000506981 UBR1Q8IWV7 1749 aa29.04■■■□□ 2.24
LMNA-221ENST00000506981 SYNMO15061 1565 aa29.02■■■□□ 2.24
LMNA-221ENST00000506981 DMRT2Q9Y5R5 561 aa29.02■■■□□ 2.24
LMNA-221ENST00000506981 PIK3C2BO00750 1634 aa29.02■■■□□ 2.24
LMNA-221ENST00000506981 NOS1P29475 1434 aa28.99■■■□□ 2.23
LMNA-221ENST00000506981 KDM5AP29375 1690 aaKnown RBP28.99■■■□□ 2.23
LMNA-221ENST00000506981 THEMISQ8N1K5 641 aaPredicted RBP28.98■■■□□ 2.23
LMNA-221ENST00000506981 SPHKAPQ2M3C7 1700 aa28.97■■■□□ 2.23
LMNA-221ENST00000506981 PKD2Q13563 968 aa28.95■■■□□ 2.22
LMNA-221ENST00000506981 TRIM52Q96A61 297 aa28.95■■■□□ 2.22
LMNA-221ENST00000506981 PTPRTO14522 1441 aa28.94■■■□□ 2.22
LMNA-221ENST00000506981 STAG3Q9UJ98 1225 aa28.92■■■□□ 2.22
LMNA-221ENST00000506981 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
LMNA-221ENST00000506981 MYO5BQ9ULV0 1848 aa28.91■■■□□ 2.22
LMNA-221ENST00000506981 ADGRB3O60242 1522 aa28.9■■■□□ 2.22
LMNA-221ENST00000506981 SLC52A1Q9NWF4 448 aa28.89■■■□□ 2.22
LMNA-221ENST00000506981 SETD5Q9C0A6 1442 aa28.87■■■□□ 2.21
LMNA-221ENST00000506981 IDI1Q13907 227 aa28.87■■■□□ 2.21
LMNA-221ENST00000506981 ANKLE2Q86XL3 938 aa28.87■■■□□ 2.21
LMNA-221ENST00000506981 NEURL4Q96JN8 1562 aa28.87■■■□□ 2.21
LMNA-221ENST00000506981 ACIN1Q9UKV3 1341 aaKnown RBP28.85■■■□□ 2.21
LMNA-221ENST00000506981 SLIT1O75093 1534 aa28.84■■■□□ 2.21
LMNA-221ENST00000506981 IQGAP1P46940 1657 aa28.83■■■□□ 2.21
LMNA-221ENST00000506981 SLC4A1APQ9BWU0 796 aaKnown RBP28.81■■■□□ 2.2
LMNA-221ENST00000506981 TMEM131LA2VDJ0 1609 aa28.8■■■□□ 2.2
LMNA-221ENST00000506981 ARHGAP23Q9P227 1491 aa28.8■■■□□ 2.2
LMNA-221ENST00000506981 SCAF11Q99590 1463 aaKnown RBP28.79■■■□□ 2.2
LMNA-221ENST00000506981 KIF1BO60333 1816 aa28.78■■■□□ 2.2
LMNA-221ENST00000506981 MED14O60244 1454 aa28.78■■■□□ 2.2
LMNA-221ENST00000506981 NPHP4O75161 1426 aaPredicted RBP28.77■■■□□ 2.2
LMNA-221ENST00000506981 EID1Q9Y6B2 187 aa28.77■■■□□ 2.2
LMNA-221ENST00000506981 TRPM2O94759 1503 aa28.77■■■□□ 2.2
LMNA-221ENST00000506981 TMEM2Q9UHN6 1383 aa28.76■■■□□ 2.2
LMNA-221ENST00000506981 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
LMNA-221ENST00000506981 CHGAP10645 457 aaKnown RBP28.75■■■□□ 2.19
LMNA-221ENST00000506981 CLTCL1P53675 1640 aa28.73■■■□□ 2.19
LMNA-221ENST00000506981 TXNDC2Q86VQ3 553 aa28.73■■■□□ 2.19
LMNA-221ENST00000506981 LTKP29376 864 aa28.67■■■□□ 2.18
LMNA-221ENST00000506981 MPHOSPH9Q99550 1183 aa28.67■■■□□ 2.18
LMNA-221ENST00000506981 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
LMNA-221ENST00000506981 HDGFP51858 240 aaKnown RBP28.65■■■□□ 2.18
LMNA-221ENST00000506981 RIMS2Q9UQ26 1411 aa28.65■■■□□ 2.18
LMNA-221ENST00000506981 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
LMNA-221ENST00000506981 ZNF335Q9H4Z2 1342 aaPredicted RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms