RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
NR1I3-222ENST00000506018 KDM5DQ9BY66 1539 aa16.25■□□□□ 0.19
NR1I3-222ENST00000506018 ZNF142P52746 1687 aaPredicted RBP16.24■□□□□ 0.19
NR1I3-222ENST00000506018 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
NR1I3-222ENST00000506018 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
NR1I3-222ENST00000506018 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
NR1I3-222ENST00000506018 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
NR1I3-222ENST00000506018 EIF2AK4Q9P2K8 1649 aaKnown RBP16.22■□□□□ 0.19
NR1I3-222ENST00000506018 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.19
NR1I3-222ENST00000506018 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.18
NR1I3-222ENST00000506018 PTPRTO14522 1441 aa16.2■□□□□ 0.18
NR1I3-222ENST00000506018 CAMSAP1Q5T5Y3 1602 aa16.2■□□□□ 0.18
NR1I3-222ENST00000506018 ZC3H13Q5T200 1668 aaKnown RBP16.2■□□□□ 0.18
NR1I3-222ENST00000506018 RNF17Q9BXT8 1623 aaKnown RBP16.2■□□□□ 0.18
NR1I3-222ENST00000506018 NCOA1Q15788 1441 aa16.2■□□□□ 0.18
NR1I3-222ENST00000506018 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
NR1I3-222ENST00000506018 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
NR1I3-222ENST00000506018 CERKQ8TCT0 537 aa16.18■□□□□ 0.18
NR1I3-222ENST00000506018 FGD6Q6ZV73 1430 aa16.18■□□□□ 0.18
NR1I3-222ENST00000506018 PZPP20742 1482 aa16.18■□□□□ 0.18
NR1I3-222ENST00000506018 DNMT1P26358 1616 aaKnown RBP16.17■□□□□ 0.18
NR1I3-222ENST00000506018 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
NR1I3-222ENST00000506018 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
NR1I3-222ENST00000506018 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
NR1I3-222ENST00000506018 TNRQ92752 1358 aa16.15■□□□□ 0.18
NR1I3-222ENST00000506018 PKD2Q13563 968 aa16.14■□□□□ 0.17
NR1I3-222ENST00000506018 KIF15Q9NS87 1388 aa16.14■□□□□ 0.17
NR1I3-222ENST00000506018 ABCC5O15440 1437 aa16.14■□□□□ 0.17
NR1I3-222ENST00000506018 DAPK1P53355 1430 aa16.14■□□□□ 0.17
NR1I3-222ENST00000506018 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
NR1I3-222ENST00000506018 ABCC3O15438 1527 aa16.12■□□□□ 0.17
NR1I3-222ENST00000506018 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
NR1I3-222ENST00000506018 CEP152O94986 1710 aa16.11■□□□□ 0.17
NR1I3-222ENST00000506018 NLRP1Q9C000 1473 aa16.11■□□□□ 0.17
NR1I3-222ENST00000506018 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
NR1I3-222ENST00000506018 RRP7BPQ9NSQ0 103 aa16.11■□□□□ 0.17
NR1I3-222ENST00000506018 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
NR1I3-222ENST00000506018 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
NR1I3-222ENST00000506018 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
NR1I3-222ENST00000506018 KANK1Q14678 1352 aa16.09■□□□□ 0.17
NR1I3-222ENST00000506018 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
NR1I3-222ENST00000506018 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
NR1I3-222ENST00000506018 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.16
NR1I3-222ENST00000506018 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
NR1I3-222ENST00000506018 SPATA31D1Q6ZQQ2 1576 aa16.06■□□□□ 0.16
NR1I3-222ENST00000506018 UGGT1Q9NYU2 1555 aa16.06■□□□□ 0.16
NR1I3-222ENST00000506018 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
NR1I3-222ENST00000506018 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
NR1I3-222ENST00000506018 IQSEC2Q5JU85 1478 aa16.05■□□□□ 0.16
NR1I3-222ENST00000506018 LTBP4Q8N2S1 1624 aa16.04■□□□□ 0.16
NR1I3-222ENST00000506018 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
NR1I3-222ENST00000506018 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
NR1I3-222ENST00000506018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
NR1I3-222ENST00000506018 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
NR1I3-222ENST00000506018 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.16
NR1I3-222ENST00000506018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.01■□□□□ 0.15
NR1I3-222ENST00000506018 ZNF335Q9H4Z2 1342 aaPredicted RBP15.99■□□□□ 0.15
NR1I3-222ENST00000506018 NEURL4Q96JN8 1562 aa15.98■□□□□ 0.15
NR1I3-222ENST00000506018 LMTK2Q8IWU2 1503 aa15.98■□□□□ 0.15
NR1I3-222ENST00000506018 UBR1Q8IWV7 1749 aa15.98■□□□□ 0.15
NR1I3-222ENST00000506018 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
NR1I3-222ENST00000506018 IQGAP1P46940 1657 aa15.97■□□□□ 0.15
NR1I3-222ENST00000506018 NPHP4O75161 1426 aaPredicted RBP15.95■□□□□ 0.14
NR1I3-222ENST00000506018 VWDEQ8N2E2 1590 aa15.95■□□□□ 0.14
NR1I3-222ENST00000506018 MED14O60244 1454 aa15.95■□□□□ 0.14
NR1I3-222ENST00000506018 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
NR1I3-222ENST00000506018 CPS1P31327 1500 aa15.95■□□□□ 0.14
NR1I3-222ENST00000506018 EFCAB6Q5THR3 1501 aa15.93■□□□□ 0.14
NR1I3-222ENST00000506018 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
NR1I3-222ENST00000506018 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
NR1I3-222ENST00000506018 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
NR1I3-222ENST00000506018 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
NR1I3-222ENST00000506018 RPRD2Q5VT52 1461 aaKnown RBP15.9■□□□□ 0.14
NR1I3-222ENST00000506018 SCAF11Q99590 1463 aaKnown RBP15.9■□□□□ 0.14
NR1I3-222ENST00000506018 TET3O43151 1660 aa15.9■□□□□ 0.14
NR1I3-222ENST00000506018 GCC2Q8IWJ2 1684 aa15.9■□□□□ 0.14
NR1I3-222ENST00000506018 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
NR1I3-222ENST00000506018 SLIT1O75093 1534 aa15.89■□□□□ 0.13
NR1I3-222ENST00000506018 UNC13BO14795 1591 aa15.89■□□□□ 0.13
NR1I3-222ENST00000506018 ITGAEP38570 1179 aa15.87■□□□□ 0.13
NR1I3-222ENST00000506018 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
NR1I3-222ENST00000506018 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
NR1I3-222ENST00000506018 SLC52A1Q9NWF4 448 aa15.87■□□□□ 0.13
NR1I3-222ENST00000506018 ARHGAP23Q9P227 1491 aa15.87■□□□□ 0.13
NR1I3-222ENST00000506018 NOS1P29475 1434 aa15.86■□□□□ 0.13
NR1I3-222ENST00000506018 SYNMO15061 1565 aa15.86■□□□□ 0.13
NR1I3-222ENST00000506018 TOM1O60784 492 aa15.85■□□□□ 0.13
NR1I3-222ENST00000506018 IDI1Q13907 227 aa15.85■□□□□ 0.13
NR1I3-222ENST00000506018 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
NR1I3-222ENST00000506018 TMEM2Q9UHN6 1383 aa15.85■□□□□ 0.13
NR1I3-222ENST00000506018 IQGAP3Q86VI3 1631 aa15.84■□□□□ 0.13
NR1I3-222ENST00000506018 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
NR1I3-222ENST00000506018 LTKP29376 864 aa15.82■□□□□ 0.12
NR1I3-222ENST00000506018 E9PCH4 1651 aa15.81■□□□□ 0.12
NR1I3-222ENST00000506018 HDGFP51858 240 aaKnown RBP15.81■□□□□ 0.12
NR1I3-222ENST00000506018 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
NR1I3-222ENST00000506018 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
NR1I3-222ENST00000506018 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
NR1I3-222ENST00000506018 NUP155O75694 1391 aa15.8■□□□□ 0.12
NR1I3-222ENST00000506018 MYO5BQ9ULV0 1848 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms